RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 FDX1P10109 184 aa13.39□□□□□ -0.27
TRA2B-204ENST00000414862 GJA5P36382 358 aa13.39□□□□□ -0.27
TRA2B-204ENST00000414862 GUCA2AQ02747 115 aa13.39□□□□□ -0.27
TRA2B-204ENST00000414862 PCDHB3Q9Y5E6 796 aa13.39□□□□□ -0.27
TRA2B-204ENST00000414862 WDR7Q9Y4E6 1490 aa13.39□□□□□ -0.27
TRA2B-204ENST00000414862 ZCCHC11Q5TAX3 1644 aaKnown RBP13.39□□□□□ -0.27
TRA2B-204ENST00000414862 MORN1Q5T089 497 aa13.38□□□□□ -0.27
TRA2B-204ENST00000414862 UGGT2Q9NYU1 1516 aa13.36□□□□□ -0.27
TRA2B-204ENST00000414862 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
TRA2B-204ENST00000414862 TUSC1Q2TAM9 212 aa13.36□□□□□ -0.27
TRA2B-204ENST00000414862 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
TRA2B-204ENST00000414862 FBXO41Q8TF61 875 aa13.35□□□□□ -0.27
TRA2B-204ENST00000414862 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRA2B-204ENST00000414862 HCSTQ9UBK5 93 aa13.35□□□□□ -0.27
TRA2B-204ENST00000414862 PCDHGC3Q9UN70 934 aa13.35□□□□□ -0.27
TRA2B-204ENST00000414862 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
TRA2B-204ENST00000414862 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
TRA2B-204ENST00000414862 SLC27A5Q9Y2P5 690 aa13.34□□□□□ -0.27
TRA2B-204ENST00000414862 BLOC1S3Q6QNY0 202 aa13.33□□□□□ -0.28
TRA2B-204ENST00000414862 MAGI3Q5TCQ9 1506 aa13.33□□□□□ -0.28
TRA2B-204ENST00000414862 CD109Q6YHK3 1445 aa13.32□□□□□ -0.28
TRA2B-204ENST00000414862 GTF3C3Q9Y5Q9 886 aa13.32□□□□□ -0.28
TRA2B-204ENST00000414862 NR1I2O75469 434 aa13.31□□□□□ -0.28
TRA2B-204ENST00000414862 COPS2P61201 443 aa13.31□□□□□ -0.28
TRA2B-204ENST00000414862 SCUBE3Q8IX30 993 aa13.31□□□□□ -0.28
TRA2B-204ENST00000414862 RAPGEF2Q9Y4G8 1499 aa13.3□□□□□ -0.28
TRA2B-204ENST00000414862 QPCTQ16769 361 aa13.3□□□□□ -0.28
TRA2B-204ENST00000414862 PRPF38BQ5VTL8 546 aaKnown RBP13.3□□□□□ -0.28
TRA2B-204ENST00000414862 CFAP43Q8NDM7 1665 aa13.29□□□□□ -0.28
TRA2B-204ENST00000414862 LILRB3O75022 631 aa13.29□□□□□ -0.28
TRA2B-204ENST00000414862 Q3C1V9 767 aa13.29□□□□□ -0.28
TRA2B-204ENST00000414862 ZBTB3Q9H5J0 574 aa13.29□□□□□ -0.28
TRA2B-204ENST00000414862 NUTM2BA6NNL0 878 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-204ENST00000414862 NUTM2EB1AL46 878 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-204ENST00000414862 C6orf229H3BNL8 230 aa13.28□□□□□ -0.28
TRA2B-204ENST00000414862 HRCP23327 699 aa13.28□□□□□ -0.28
TRA2B-204ENST00000414862 NUTM2DQ5VT03 806 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-204ENST00000414862 NUTM2AQ8IVF1 878 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-204ENST00000414862 CABLES1Q8TDN4 633 aa13.28□□□□□ -0.28
TRA2B-204ENST00000414862 MTRQ99707 1265 aa13.28□□□□□ -0.28
TRA2B-204ENST00000414862 KIF21BO75037 1637 aa13.28□□□□□ -0.28
TRA2B-204ENST00000414862 MTMR2Q13614 643 aa13.27□□□□□ -0.29
TRA2B-204ENST00000414862 FBXO31Q5XUX0 539 aaPredicted RBP13.27□□□□□ -0.29
TRA2B-204ENST00000414862 SYMPKQ92797 1274 aaKnown RBP13.27□□□□□ -0.29
TRA2B-204ENST00000414862 GOLGA3Q08378 1498 aa13.26□□□□□ -0.29
TRA2B-204ENST00000414862 PPP2R2DQ66LE6 453 aa13.26□□□□□ -0.29
TRA2B-204ENST00000414862 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-204ENST00000414862 TJAP1Q5JTD0 557 aa13.25□□□□□ -0.29
TRA2B-204ENST00000414862 SALL2Q9Y467 1007 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-204ENST00000414862 SPDYE5A6NIY4 337 aa13.24□□□□□ -0.29
TRA2B-204ENST00000414862 BRICD5Q6PL45 260 aa13.24□□□□□ -0.29
TRA2B-204ENST00000414862 RNF19BQ6ZMZ0 732 aa13.24□□□□□ -0.29
TRA2B-204ENST00000414862 IL21Q9HBE4 155 aa13.24□□□□□ -0.29
TRA2B-204ENST00000414862 ZPR1O75312 459 aa13.23□□□□□ -0.29
TRA2B-204ENST00000414862 FMNL1O95466 1100 aaPredicted RBP13.23□□□□□ -0.29
TRA2B-204ENST00000414862 RFC5P40937 340 aa13.23□□□□□ -0.29
TRA2B-204ENST00000414862 THAP11Q96EK4 314 aa13.23□□□□□ -0.29
TRA2B-204ENST00000414862 ABCA8O94911 1581 aa13.23□□□□□ -0.29
TRA2B-204ENST00000414862 ARAP3Q8WWN8 1544 aa13.23□□□□□ -0.29
TRA2B-204ENST00000414862 PTPRMP28827 1452 aa13.23□□□□□ -0.29
TRA2B-204ENST00000414862 RETREG3Q86VR2 466 aa13.21□□□□□ -0.29
TRA2B-204ENST00000414862 ZNF516Q92618 1163 aa13.21□□□□□ -0.29
TRA2B-204ENST00000414862 USB1Q9BQ65 265 aaKnown RBP13.2□□□□□ -0.3
TRA2B-204ENST00000414862 PCF11O94913 1555 aaKnown RBP13.2□□□□□ -0.3
TRA2B-204ENST00000414862 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
TRA2B-204ENST00000414862 SPSB2Q99619 263 aa13.19□□□□□ -0.3
TRA2B-204ENST00000414862 FAM9AQ8IZU1 332 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-204ENST00000414862 PRR7Q8TB68 274 aa13.18□□□□□ -0.3
TRA2B-204ENST00000414862 CFAP99D6REC4 459 aa13.17□□□□□ -0.3
TRA2B-204ENST00000414862 TLL1O43897 1013 aa13.17□□□□□ -0.3
TRA2B-204ENST00000414862 TMEM259Q4ZIN3 620 aa13.17□□□□□ -0.3
TRA2B-204ENST00000414862 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
TRA2B-204ENST00000414862 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
TRA2B-204ENST00000414862 ARID4BQ4LE39 1312 aaPredicted RBP13.15□□□□□ -0.3
TRA2B-204ENST00000414862 AP1G2O75843 785 aa13.15□□□□□ -0.3
TRA2B-204ENST00000414862 KCNC4Q03721 635 aa13.15□□□□□ -0.3
TRA2B-204ENST00000414862 TSC1Q92574 1164 aa13.15□□□□□ -0.3
TRA2B-204ENST00000414862 LMTK3Q96Q04 1460 aa13.15□□□□□ -0.3
TRA2B-204ENST00000414862 ITGBL1O95965 494 aaPredicted RBP13.14□□□□□ -0.31
TRA2B-204ENST00000414862 ADH1BP00325 375 aa13.14□□□□□ -0.31
TRA2B-204ENST00000414862 NEO1Q92859 1461 aa13.14□□□□□ -0.31
TRA2B-204ENST00000414862 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
TRA2B-204ENST00000414862 FAM160A2Q8N612 972 aaPredicted RBP13.13□□□□□ -0.31
TRA2B-204ENST00000414862 HELBQ8NG08 1087 aaPredicted RBP13.13□□□□□ -0.31
TRA2B-204ENST00000414862 NKX2-3Q8TAU0 364 aa13.13□□□□□ -0.31
TRA2B-204ENST00000414862 ABCA9Q8IUA7 1624 aa13.13□□□□□ -0.31
TRA2B-204ENST00000414862 MADDQ8WXG6 1647 aa13.13□□□□□ -0.31
TRA2B-204ENST00000414862 RAPGEF3O95398 923 aa13.12□□□□□ -0.31
TRA2B-204ENST00000414862 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
TRA2B-204ENST00000414862 BCORL1Q5H9F3 1711 aa13.11□□□□□ -0.31
TRA2B-204ENST00000414862 MSS51Q4VC12 460 aa13.11□□□□□ -0.31
TRA2B-204ENST00000414862 ATP10BO94823 1461 aa13.1□□□□□ -0.31
TRA2B-204ENST00000414862 ARHGEF40Q8TER5 1519 aa13.1□□□□□ -0.31
TRA2B-204ENST00000414862 CTDSPL2Q05D32 466 aa13.1□□□□□ -0.31
TRA2B-204ENST00000414862 DESI1Q6ICB0 168 aa13.1□□□□□ -0.31
TRA2B-204ENST00000414862 FRMPD1Q5SYB0 1578 aa13.08□□□□□ -0.32
TRA2B-204ENST00000414862 JUNDP17535 347 aa13.08□□□□□ -0.32
TRA2B-204ENST00000414862 FLIIQ13045 1269 aa13.08□□□□□ -0.32
TRA2B-204ENST00000414862 SLC6A16Q9GZN6 736 aa13.08□□□□□ -0.32
TRA2B-204ENST00000414862 PRDM9Q9NQV7 894 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms