RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 ADGRF5Q8IZF2 1346 aa24.05■■□□□ 1.44
CPNE1-208ENST00000414711 TRPM3Q9HCF6 1732 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-208ENST00000414711 TMEM132EQ6IEE7 984 aa24.01■■□□□ 1.43
CPNE1-208ENST00000414711 SPATA31A1Q5TZJ5 1347 aa24.01■■□□□ 1.43
CPNE1-208ENST00000414711 YTHDC2Q9H6S0 1430 aaKnown RBP24.01■■□□□ 1.43
CPNE1-208ENST00000414711 ALS2Q96Q42 1657 aa24■■□□□ 1.43
CPNE1-208ENST00000414711 C1QTNF8P60827 252 aa23.99■■□□□ 1.43
CPNE1-208ENST00000414711 NRKQ7Z2Y5 1582 aa23.98■■□□□ 1.43
CPNE1-208ENST00000414711 PRDM11Q9NQV5 511 aa23.97■■□□□ 1.43
CPNE1-208ENST00000414711 CRYBG1Q9Y4K1 1723 aa23.97■■□□□ 1.43
CPNE1-208ENST00000414711 PMFBP1Q8TBY8 1022 aa23.96■■□□□ 1.43
CPNE1-208ENST00000414711 PIK3C2GO75747 1445 aa23.95■■□□□ 1.42
CPNE1-208ENST00000414711 ANKARQ7Z5J8 1434 aa23.95■■□□□ 1.42
CPNE1-208ENST00000414711 UTRNP46939 3433 aa23.94■■□□□ 1.42
CPNE1-208ENST00000414711 SIRT1Q96EB6 747 aa23.93■■□□□ 1.42
CPNE1-208ENST00000414711 ANKRD30BQ9BXX2 1392 aa23.92■■□□□ 1.42
CPNE1-208ENST00000414711 PDE3BQ13370 1112 aa23.92■■□□□ 1.42
CPNE1-208ENST00000414711 GPRASP1Q5JY77 1395 aa23.91■■□□□ 1.42
CPNE1-208ENST00000414711 CASZ1Q86V15 1759 aa23.91■■□□□ 1.42
CPNE1-208ENST00000414711 MYOM1P52179 1685 aa23.91■■□□□ 1.42
CPNE1-208ENST00000414711 STRN4Q9NRL3 753 aa23.9■■□□□ 1.42
CPNE1-208ENST00000414711 KIAA0232Q92628 1395 aa23.89■■□□□ 1.41
CPNE1-208ENST00000414711 USP35Q9P2H5 1018 aa23.88■■□□□ 1.41
CPNE1-208ENST00000414711 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
CPNE1-208ENST00000414711 SAFB2Q14151 953 aaKnown RBP eCLIP23.87■■□□□ 1.413e-13■□□□□ 9.1
CPNE1-208ENST00000414711 BARGINQ6ZT62 677 aa23.87■■□□□ 1.41
CPNE1-208ENST00000414711 SPATA31E1Q6ZUB1 1445 aa23.86■■□□□ 1.41
CPNE1-208ENST00000414711 RGPD3A6NKT7 1758 aaPredicted RBP23.86■■□□□ 1.41
CPNE1-208ENST00000414711 RGPD4Q7Z3J3 1758 aa23.86■■□□□ 1.41
CPNE1-208ENST00000414711 RGL3Q3MIN7 710 aa23.86■■□□□ 1.41
CPNE1-208ENST00000414711 CHRNA2Q15822 529 aa23.85■■□□□ 1.41
CPNE1-208ENST00000414711 CHD4Q14839 1912 aa23.84■■□□□ 1.41
CPNE1-208ENST00000414711 PRAM1Q96QH2 718 aa23.84■■□□□ 1.41
CPNE1-208ENST00000414711 SLC4A1APQ9BWU0 796 aaKnown RBP23.84■■□□□ 1.41
CPNE1-208ENST00000414711 ANO8Q9HCE9 1232 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-208ENST00000414711 SSH2Q76I76 1423 aa23.84■■□□□ 1.41
CPNE1-208ENST00000414711 PHRF1Q9P1Y6 1649 aaKnown RBP23.82■■□□□ 1.4
CPNE1-208ENST00000414711 ZBTB7AO95365 584 aa23.81■■□□□ 1.4
CPNE1-208ENST00000414711 PTGER2P43116 358 aa23.81■■□□□ 1.4
CPNE1-208ENST00000414711 DHX57Q6P158 1386 aaKnown RBP23.8■■□□□ 1.4
CPNE1-208ENST00000414711 PAK3O75914 559 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-208ENST00000414711 PDGFDQ9GZP0 370 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-208ENST00000414711 TCP11L2Q8N4U5 519 aa23.78■■□□□ 1.4
CPNE1-208ENST00000414711 FHDC1Q9C0D6 1143 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-208ENST00000414711 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
CPNE1-208ENST00000414711 EVA1CP58658 441 aa23.77■■□□□ 1.4
CPNE1-208ENST00000414711 SYT17Q9BSW7 474 aa23.77■■□□□ 1.4
CPNE1-208ENST00000414711 C14orf93Q9H972 538 aaKnown RBP23.77■■□□□ 1.4
CPNE1-208ENST00000414711 DLC1Q96QB1 1528 aa23.77■■□□□ 1.4
CPNE1-208ENST00000414711 TULP4Q9NRJ4 1543 aa23.77■■□□□ 1.4
CPNE1-208ENST00000414711 PRR36Q9H6K5 1346 aa23.77■■□□□ 1.4
CPNE1-208ENST00000414711 PARP4Q9UKK3 1724 aaKnown RBP23.76■■□□□ 1.39
CPNE1-208ENST00000414711 CEP350Q5VT06 3117 aa23.76■■□□□ 1.39
CPNE1-208ENST00000414711 GIGYF1O75420 1035 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-208ENST00000414711 POGKQ9P215 609 aa23.76■■□□□ 1.39
CPNE1-208ENST00000414711 OVOS2A0A0G2JMS6 1433 aa23.76■■□□□ 1.39
CPNE1-208ENST00000414711 OVOS2A0A0J9YW53 1432 aa23.76■■□□□ 1.39
CPNE1-208ENST00000414711 OVOS2Q6IE36 1432 aa23.76■■□□□ 1.39
CPNE1-208ENST00000414711 C11orf95C9JLR9 678 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-208ENST00000414711 ZC3H6P61129 1189 aaKnown RBP23.75■■□□□ 1.39
CPNE1-208ENST00000414711 LARP1Q6PKG0 1096 aaKnown RBP23.75■■□□□ 1.39
CPNE1-208ENST00000414711 PEAK1Q9H792 1746 aa23.74■■□□□ 1.39
CPNE1-208ENST00000414711 PLSCR1O15162 318 aa23.74■■□□□ 1.39
CPNE1-208ENST00000414711 NGDNQ8NEJ9 315 aaKnown RBP23.74■■□□□ 1.39
CPNE1-208ENST00000414711 ATF5Q9Y2D1 282 aaPredicted RBP23.74■■□□□ 1.39
CPNE1-208ENST00000414711 HIRIP3Q9BW71 556 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-208ENST00000414711 BCL11BQ9C0K0 894 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-208ENST00000414711 ATP7BP35670 1465 aa23.72■■□□□ 1.39
CPNE1-208ENST00000414711 CFAP70Q5T0N1 1121 aa23.71■■□□□ 1.39
CPNE1-208ENST00000414711 THRAP3Q9Y2W1 955 aaKnown RBP23.71■■□□□ 1.39
CPNE1-208ENST00000414711 LMO7Q8WWI1 1683 aa23.7■■□□□ 1.39
CPNE1-208ENST00000414711 SBF2Q86WG5 1849 aa23.68■■□□□ 1.38
CPNE1-208ENST00000414711 LRRC37A3O60309 1634 aa23.66■■□□□ 1.38
CPNE1-208ENST00000414711 MINK1Q8N4C8 1332 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-208ENST00000414711 NUTM2GQ5VZR2 741 aa23.66■■□□□ 1.38
CPNE1-208ENST00000414711 SGIP1Q9BQI5 828 aa23.65■■□□□ 1.38
CPNE1-208ENST00000414711 MTFR1LQ9H019 292 aa23.65■■□□□ 1.38
CPNE1-208ENST00000414711 PTF1AQ7RTS3 328 aa23.64■■□□□ 1.37
CPNE1-208ENST00000414711 PROM2Q8N271 834 aa23.64■■□□□ 1.37
CPNE1-208ENST00000414711 STK32BQ9NY57 414 aa23.64■■□□□ 1.37
CPNE1-208ENST00000414711 ITSN1Q15811 1721 aa23.64■■□□□ 1.37
CPNE1-208ENST00000414711 CPDO75976 1380 aa23.64■■□□□ 1.37
CPNE1-208ENST00000414711 WASLO00401 505 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-208ENST00000414711 MAP3K5Q99683 1374 aa23.63■■□□□ 1.37
CPNE1-208ENST00000414711 COL5A2P05997 1499 aaPredicted RBP23.62■■□□□ 1.37
CPNE1-208ENST00000414711 ADGRB1O14514 1584 aa23.61■■□□□ 1.37
CPNE1-208ENST00000414711 SLC15A2Q16348 729 aa23.6■■□□□ 1.37
CPNE1-208ENST00000414711 ARXQ96QS3 562 aa23.6■■□□□ 1.37
CPNE1-208ENST00000414711 CRB1P82279 1406 aa23.59■■□□□ 1.37
CPNE1-208ENST00000414711 SHANK3Q9BYB0 1731 aa23.59■■□□□ 1.37
CPNE1-208ENST00000414711 GPR162Q16538 588 aa23.59■■□□□ 1.37
CPNE1-208ENST00000414711 TRAK1Q9UPV9 953 aa23.58■■□□□ 1.37
CPNE1-208ENST00000414711 DDB1Q16531 1140 aa23.57■■□□□ 1.36
CPNE1-208ENST00000414711 TXNRD1Q16881 649 aa23.57■■□□□ 1.36
CPNE1-208ENST00000414711 PPARGC1BQ86YN6 1023 aaKnown RBP23.57■■□□□ 1.36
CPNE1-208ENST00000414711 USP19O94966 1318 aa23.56■■□□□ 1.36
CPNE1-208ENST00000414711 BCL9O00512 1426 aa23.55■■□□□ 1.36
CPNE1-208ENST00000414711 POLR3AO14802 1390 aaPredicted RBP23.52■■□□□ 1.36
CPNE1-208ENST00000414711 AATKQ6ZMQ8 1374 aa23.52■■□□□ 1.36
CPNE1-208ENST00000414711 NUDT16Q96DE0 195 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms