RNA–Protein interactions for RNA: ENST00000412678.6

CDHR4-202, Transcript of cadherin related family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR4, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-202ENST00000412678 ASXL2Q76L83 1435 aa14.1□□□□□ -0.15
CDHR4-202ENST00000412678 HNRNPMP52272 730 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDHR4-202ENST00000412678 SSFA2P28290 1259 aa14.09□□□□□ -0.15
CDHR4-202ENST00000412678 LAMC1P11047 1609 aa14.09□□□□□ -0.15
CDHR4-202ENST00000412678 CD2BP2O95400 341 aaKnown RBP14.08□□□□□ -0.15
CDHR4-202ENST00000412678 GABPB1Q06547 395 aaPredicted RBP14.08□□□□□ -0.15
CDHR4-202ENST00000412678 CAVIN1Q6NZI2 390 aaKnown RBP14.08□□□□□ -0.15
CDHR4-202ENST00000412678 ABCC10Q5T3U5 1492 aa14.08□□□□□ -0.16
CDHR4-202ENST00000412678 PRIM1P49642 420 aaKnown RBP14.07□□□□□ -0.16
CDHR4-202ENST00000412678 MYO5CQ9NQX4 1742 aa14.07□□□□□ -0.16
CDHR4-202ENST00000412678 CCDC66A2RUB6 948 aa14.07□□□□□ -0.16
CDHR4-202ENST00000412678 K7ELQ4 463 aaPredicted RBP14.07□□□□□ -0.16
CDHR4-202ENST00000412678 IRX5P78411 483 aaPredicted RBP14.07□□□□□ -0.16
CDHR4-202ENST00000412678 MVPQ14764 893 aaKnown RBP14.07□□□□□ -0.16
CDHR4-202ENST00000412678 TEX2Q8IWB9 1127 aa14.07□□□□□ -0.16
CDHR4-202ENST00000412678 PLA2R1Q13018 1463 aa14.07□□□□□ -0.16
CDHR4-202ENST00000412678 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
CDHR4-202ENST00000412678 PTMAP06454 111 aaKnown RBP14.06□□□□□ -0.16
CDHR4-202ENST00000412678 PIBF1Q8WXW3 757 aa14.06□□□□□ -0.16
CDHR4-202ENST00000412678 OGFRQ9NZT2 677 aa14.06□□□□□ -0.16
CDHR4-202ENST00000412678 AK9Q5TCS8 1911 aa14.06□□□□□ -0.16
CDHR4-202ENST00000412678 LRSAM1Q6UWE0 723 aa14.05□□□□□ -0.16
CDHR4-202ENST00000412678 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
CDHR4-202ENST00000412678 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
CDHR4-202ENST00000412678 BCL2L12Q9HB09 334 aa14.05□□□□□ -0.16
CDHR4-202ENST00000412678 ZBTB7CA1YPR0 619 aa14.04□□□□□ -0.16
CDHR4-202ENST00000412678 NUCB2P80303 420 aa14.04□□□□□ -0.16
CDHR4-202ENST00000412678 LMBRD1Q9NUN5 540 aa14.04□□□□□ -0.16
CDHR4-202ENST00000412678 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.04□□□□□ -0.16
CDHR4-202ENST00000412678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.04□□□□□ -0.16
CDHR4-202ENST00000412678 ZBTB22O15209 634 aa14.04□□□□□ -0.16
CDHR4-202ENST00000412678 IRX3P78415 501 aaPredicted RBP14.04□□□□□ -0.16
CDHR4-202ENST00000412678 CHRM1P11229 460 aaPredicted RBP14.03□□□□□ -0.16
CDHR4-202ENST00000412678 ANKRD7Q92527 254 aa14.03□□□□□ -0.16
CDHR4-202ENST00000412678 TSC1Q92574 1164 aa14.03□□□□□ -0.16
CDHR4-202ENST00000412678 KCNJ4P48050 445 aa14.03□□□□□ -0.16
CDHR4-202ENST00000412678 NOLC1Q14978 699 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDHR4-202ENST00000412678 MCTP1Q6DN14 999 aa14.03□□□□□ -0.16
CDHR4-202ENST00000412678 DZIP1LQ8IYY4 767 aaKnown RBP14.03□□□□□ -0.16
CDHR4-202ENST00000412678 KIF2CQ99661 725 aa14.03□□□□□ -0.16
CDHR4-202ENST00000412678 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
CDHR4-202ENST00000412678 EIF2AK4Q9P2K8 1649 aaKnown RBP14.03□□□□□ -0.16
CDHR4-202ENST00000412678 CDCA8Q53HL2 280 aa14.02□□□□□ -0.16
CDHR4-202ENST00000412678 TCP11L2Q8N4U5 519 aa14.02□□□□□ -0.16
CDHR4-202ENST00000412678 GAS2L2Q8NHY3 880 aa14.02□□□□□ -0.16
CDHR4-202ENST00000412678 JARID2Q92833 1246 aaPredicted RBP14.02□□□□□ -0.16
CDHR4-202ENST00000412678 SYNMO15061 1565 aa14.02□□□□□ -0.16
CDHR4-202ENST00000412678 CCDC141Q6ZP82 1450 aa14.02□□□□□ -0.17
CDHR4-202ENST00000412678 DIAPH3Q9NSV4 1193 aa14.02□□□□□ -0.17
CDHR4-202ENST00000412678 ZKSCAN2Q63HK3 967 aa14.01□□□□□ -0.17
CDHR4-202ENST00000412678 TTC37Q6PGP7 1564 aa14.01□□□□□ -0.17
CDHR4-202ENST00000412678 TIGD1Q96MW7 591 aa14.01□□□□□ -0.17
CDHR4-202ENST00000412678 FKBP5Q13451 457 aaPredicted RBP14.01□□□□□ -0.17
CDHR4-202ENST00000412678 ITPRIPQ8IWB1 547 aa14.01□□□□□ -0.17
CDHR4-202ENST00000412678 LNPKQ9C0E8 428 aa14.01□□□□□ -0.17
CDHR4-202ENST00000412678 TSPYL1Q9H0U9 437 aa14.01□□□□□ -0.17
CDHR4-202ENST00000412678 SPTLC3Q9NUV7 552 aa14.01□□□□□ -0.17
CDHR4-202ENST00000412678 ARHGAP5Q13017 1502 aa14□□□□□ -0.17
CDHR4-202ENST00000412678 ZFP91Q96JP5 570 aaPredicted RBP14□□□□□ -0.17
CDHR4-202ENST00000412678 U2AF2P26368 475 aaKnown RBP eCLIP14□□□□□ -0.17
CDHR4-202ENST00000412678 HDAC1Q13547 482 aaPredicted RBP14□□□□□ -0.17
CDHR4-202ENST00000412678 EFCAB2Q5VUJ9 269 aa14□□□□□ -0.17
CDHR4-202ENST00000412678 AEBP2Q6ZN18 517 aaPredicted RBP14□□□□□ -0.17
CDHR4-202ENST00000412678 KIF16BQ96L93 1317 aa13.99□□□□□ -0.17
CDHR4-202ENST00000412678 CARD14Q9BXL6 1004 aa13.99□□□□□ -0.17
CDHR4-202ENST00000412678 PLCH2O75038 1416 aa13.99□□□□□ -0.17
CDHR4-202ENST00000412678 NPC1L1Q9UHC9 1359 aa13.99□□□□□ -0.17
CDHR4-202ENST00000412678 IGSF3O75054 1194 aa13.99□□□□□ -0.17
CDHR4-202ENST00000412678 CHAF1AQ13111 956 aaPredicted RBP13.99□□□□□ -0.17
CDHR4-202ENST00000412678 RUNDC1Q96C34 613 aa13.99□□□□□ -0.17
CDHR4-202ENST00000412678 DNAJC5Q9H3Z4 198 aa13.99□□□□□ -0.17
CDHR4-202ENST00000412678 RBM27Q9P2N5 1060 aaKnown RBP13.98□□□□□ -0.17
CDHR4-202ENST00000412678 PREX2Q70Z35 1606 aa13.98□□□□□ -0.17
CDHR4-202ENST00000412678 CYP2E1P05181 493 aaPredicted RBP13.98□□□□□ -0.17
CDHR4-202ENST00000412678 MYOM1P52179 1685 aa13.98□□□□□ -0.17
CDHR4-202ENST00000412678 CTIFO43310 598 aaKnown RBP13.97□□□□□ -0.17
CDHR4-202ENST00000412678 SLFN14P0C7P3 912 aa13.97□□□□□ -0.17
CDHR4-202ENST00000412678 TRIM27P14373 513 aa13.97□□□□□ -0.17
CDHR4-202ENST00000412678 CALCOCO1Q9P1Z2 691 aa13.97□□□□□ -0.17
CDHR4-202ENST00000412678 FAM193AP78312 1265 aa13.97□□□□□ -0.17
CDHR4-202ENST00000412678 WDR63Q8IWG1 891 aa13.97□□□□□ -0.17
CDHR4-202ENST00000412678 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
CDHR4-202ENST00000412678 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
CDHR4-202ENST00000412678 ABCA9Q8IUA7 1624 aa13.96□□□□□ -0.17
CDHR4-202ENST00000412678 TULP2O00295 520 aa13.96□□□□□ -0.17
CDHR4-202ENST00000412678 SYCP1Q15431 976 aa13.96□□□□□ -0.17
CDHR4-202ENST00000412678 GPT2Q8TD30 523 aa13.96□□□□□ -0.17
CDHR4-202ENST00000412678 TSR2Q969E8 191 aaKnown RBP13.96□□□□□ -0.17
CDHR4-202ENST00000412678 SMC4Q9NTJ3 1288 aa13.96□□□□□ -0.17
CDHR4-202ENST00000412678 MBD3O95983 291 aa13.96□□□□□ -0.18
CDHR4-202ENST00000412678 SYCE3A1L190 88 aa13.95□□□□□ -0.18
CDHR4-202ENST00000412678 PKP1Q13835 747 aa13.95□□□□□ -0.18
CDHR4-202ENST00000412678 CWC22Q9HCG8 908 aaKnown RBP13.95□□□□□ -0.18
CDHR4-202ENST00000412678 CD109Q6YHK3 1445 aa13.95□□□□□ -0.18
CDHR4-202ENST00000412678 CDC42BPBQ9Y5S2 1711 aa13.95□□□□□ -0.18
CDHR4-202ENST00000412678 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
CDHR4-202ENST00000412678 NUCB1Q02818 461 aa13.95□□□□□ -0.18
CDHR4-202ENST00000412678 UVSSAQ2YD98 709 aa13.95□□□□□ -0.18
CDHR4-202ENST00000412678 TSPY26PQ9H489 355 aa13.95□□□□□ -0.18
CDHR4-202ENST00000412678 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms