RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
CCDC148-203ENST00000409889 APBA3O96018 575 aa16■□□□□ 0.15
CCDC148-203ENST00000409889 PPP1R1BQ9UD71 204 aaPredicted RBP16■□□□□ 0.15
CCDC148-203ENST00000409889 NINLQ9Y2I6 1382 aa16■□□□□ 0.15
CCDC148-203ENST00000409889 FAM196AQ6ZSG2 479 aa15.99■□□□□ 0.15
CCDC148-203ENST00000409889 PMFBP1Q8TBY8 1022 aa15.98■□□□□ 0.15
CCDC148-203ENST00000409889 ANKRD30BQ9BXX2 1392 aa15.98■□□□□ 0.15
CCDC148-203ENST00000409889 ANKARQ7Z5J8 1434 aa15.96■□□□□ 0.15
CCDC148-203ENST00000409889 NBPF8Q3BBV2 869 aa15.96■□□□□ 0.15
CCDC148-203ENST00000409889 NBPF14Q5TI25 921 aa15.96■□□□□ 0.15
CCDC148-203ENST00000409889 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.15
CCDC148-203ENST00000409889 SPON1Q9HCB6 807 aa15.96■□□□□ 0.15
CCDC148-203ENST00000409889 SPATA31A1Q5TZJ5 1347 aa15.95■□□□□ 0.14
CCDC148-203ENST00000409889 SPATA31E1Q6ZUB1 1445 aa15.95■□□□□ 0.14
CCDC148-203ENST00000409889 RGL3Q3MIN7 710 aa15.95■□□□□ 0.14
CCDC148-203ENST00000409889 PHRF1Q9P1Y6 1649 aaKnown RBP15.94■□□□□ 0.14
CCDC148-203ENST00000409889 KCNQ2O43526 872 aa15.94■□□□□ 0.14
CCDC148-203ENST00000409889 SAFB2Q14151 953 aaKnown RBP eCLIP15.94■□□□□ 0.14
CCDC148-203ENST00000409889 SIRT1Q96EB6 747 aa15.94■□□□□ 0.14
CCDC148-203ENST00000409889 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
CCDC148-203ENST00000409889 GPRASP1Q5JY77 1395 aa15.93■□□□□ 0.14
CCDC148-203ENST00000409889 NRKQ7Z2Y5 1582 aa15.92■□□□□ 0.14
CCDC148-203ENST00000409889 RGPD3A6NKT7 1758 aaPredicted RBP15.91■□□□□ 0.14
CCDC148-203ENST00000409889 RGPD4Q7Z3J3 1758 aa15.91■□□□□ 0.14
CCDC148-203ENST00000409889 CASZ1Q86V15 1759 aa15.91■□□□□ 0.14
CCDC148-203ENST00000409889 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
CCDC148-203ENST00000409889 ZNF784Q8NCA9 323 aaPredicted RBP15.91■□□□□ 0.14
CCDC148-203ENST00000409889 PRAM1Q96QH2 718 aa15.91■□□□□ 0.14
CCDC148-203ENST00000409889 MAPK8IP2Q13387 824 aaPredicted RBP15.9■□□□□ 0.14
CCDC148-203ENST00000409889 STRN4Q9NRL3 753 aa15.9■□□□□ 0.14
CCDC148-203ENST00000409889 ACIN1Q9UKV3 1341 aaKnown RBP15.9■□□□□ 0.14
CCDC148-203ENST00000409889 MYOM1P52179 1685 aa15.89■□□□□ 0.13
CCDC148-203ENST00000409889 DHX57Q6P158 1386 aaKnown RBP15.89■□□□□ 0.13
CCDC148-203ENST00000409889 KIAA0232Q92628 1395 aa15.89■□□□□ 0.13
CCDC148-203ENST00000409889 PDE3BQ13370 1112 aa15.89■□□□□ 0.13
CCDC148-203ENST00000409889 USP35Q9P2H5 1018 aa15.89■□□□□ 0.13
CCDC148-203ENST00000409889 CHD4Q14839 1912 aa15.89■□□□□ 0.13
CCDC148-203ENST00000409889 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
CCDC148-203ENST00000409889 TULP4Q9NRJ4 1543 aa15.88■□□□□ 0.13
CCDC148-203ENST00000409889 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
CCDC148-203ENST00000409889 CHRNA2Q15822 529 aa15.87■□□□□ 0.13
CCDC148-203ENST00000409889 IFFO2Q5TF58 517 aa15.87■□□□□ 0.13
CCDC148-203ENST00000409889 PPARGC1BQ86YN6 1023 aaKnown RBP15.87■□□□□ 0.13
CCDC148-203ENST00000409889 C14orf93Q9H972 538 aaKnown RBP15.87■□□□□ 0.13
CCDC148-203ENST00000409889 PARP4Q9UKK3 1724 aaKnown RBP15.87■□□□□ 0.13
CCDC148-203ENST00000409889 SSH2Q76I76 1423 aa15.86■□□□□ 0.13
CCDC148-203ENST00000409889 ITSN1Q15811 1721 aa15.86■□□□□ 0.13
CCDC148-203ENST00000409889 POGKQ9P215 609 aa15.86■□□□□ 0.13
CCDC148-203ENST00000409889 SBF2Q86WG5 1849 aa15.85■□□□□ 0.13
CCDC148-203ENST00000409889 BARGINQ6ZT62 677 aa15.85■□□□□ 0.13
CCDC148-203ENST00000409889 PRR36Q9H6K5 1346 aa15.85■□□□□ 0.13
CCDC148-203ENST00000409889 EIF3AQ14152 1382 aaKnown RBP15.85■□□□□ 0.13
CCDC148-203ENST00000409889 CEP350Q5VT06 3117 aa15.85■□□□□ 0.13
CCDC148-203ENST00000409889 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
CCDC148-203ENST00000409889 HIRIP3Q9BW71 556 aaPredicted RBP15.84■□□□□ 0.13
CCDC148-203ENST00000409889 PEAK1Q9H792 1746 aa15.83■□□□□ 0.13
CCDC148-203ENST00000409889 NGDNQ8NEJ9 315 aaKnown RBP15.83■□□□□ 0.12
CCDC148-203ENST00000409889 LMO7Q8WWI1 1683 aa15.83■□□□□ 0.12
CCDC148-203ENST00000409889 C1QTNF8P60827 252 aa15.82■□□□□ 0.12
CCDC148-203ENST00000409889 ZC3H6P61129 1189 aaKnown RBP15.82■□□□□ 0.12
CCDC148-203ENST00000409889 ATP7BP35670 1465 aa15.82■□□□□ 0.12
CCDC148-203ENST00000409889 EVA1CP58658 441 aa15.81■□□□□ 0.12
CCDC148-203ENST00000409889 ANO8Q9HCE9 1232 aaPredicted RBP15.81■□□□□ 0.12
CCDC148-203ENST00000409889 MINK1Q8N4C8 1332 aaPredicted RBP15.8■□□□□ 0.12
CCDC148-203ENST00000409889 TCP11L2Q8N4U5 519 aa15.8■□□□□ 0.12
CCDC148-203ENST00000409889 GOLGB1Q14789 3259 aaKnown RBP15.79■□□□□ 0.12
CCDC148-203ENST00000409889 LRRC37A3O60309 1634 aa15.79■□□□□ 0.12
CCDC148-203ENST00000409889 ADGRB1O14514 1584 aa15.79■□□□□ 0.12
CCDC148-203ENST00000409889 OVOS2A0A0G2JMS6 1433 aa15.79■□□□□ 0.12
CCDC148-203ENST00000409889 OVOS2A0A0J9YW53 1432 aa15.79■□□□□ 0.12
CCDC148-203ENST00000409889 OVOS2Q6IE36 1432 aa15.79■□□□□ 0.12
CCDC148-203ENST00000409889 LARP1Q6PKG0 1096 aaKnown RBP15.79■□□□□ 0.12
CCDC148-203ENST00000409889 PDGFDQ9GZP0 370 aaPredicted RBP15.79■□□□□ 0.12
CCDC148-203ENST00000409889 ZBTB7AO95365 584 aa15.78■□□□□ 0.12
CCDC148-203ENST00000409889 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
CCDC148-203ENST00000409889 C11orf95C9JLR9 678 aaPredicted RBP15.77■□□□□ 0.12
CCDC148-203ENST00000409889 WASLO00401 505 aaPredicted RBP15.77■□□□□ 0.12
CCDC148-203ENST00000409889 PTGER2P43116 358 aa15.77■□□□□ 0.12
CCDC148-203ENST00000409889 NUTM2GQ5VZR2 741 aa15.77■□□□□ 0.12
CCDC148-203ENST00000409889 PLSCR1O15162 318 aa15.76■□□□□ 0.11
CCDC148-203ENST00000409889 TRAK1Q9UPV9 953 aa15.76■□□□□ 0.11
CCDC148-203ENST00000409889 THRAP3Q9Y2W1 955 aaKnown RBP15.76■□□□□ 0.11
CCDC148-203ENST00000409889 WNK3Q9BYP7 1800 aa15.75■□□□□ 0.11
CCDC148-203ENST00000409889 AKAP12Q02952 1782 aa15.75■□□□□ 0.11
CCDC148-203ENST00000409889 FHDC1Q9C0D6 1143 aaPredicted RBP15.75■□□□□ 0.11
CCDC148-203ENST00000409889 TOPAZ1Q8N9V7 1692 aa15.75■□□□□ 0.11
CCDC148-203ENST00000409889 COL5A2P05997 1499 aaPredicted RBP15.74■□□□□ 0.11
CCDC148-203ENST00000409889 SYT17Q9BSW7 474 aa15.74■□□□□ 0.11
CCDC148-203ENST00000409889 BCL11BQ9C0K0 894 aaPredicted RBP15.74■□□□□ 0.11
CCDC148-203ENST00000409889 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
CCDC148-203ENST00000409889 ARHGEF28Q8N1W1 1705 aaKnown RBP15.74■□□□□ 0.11
CCDC148-203ENST00000409889 MPHOSPH9Q99550 1183 aa15.73■□□□□ 0.11
CCDC148-203ENST00000409889 CPDO75976 1380 aa15.73■□□□□ 0.11
CCDC148-203ENST00000409889 CRB1P82279 1406 aa15.71■□□□□ 0.11
CCDC148-203ENST00000409889 PTF1AQ7RTS3 328 aa15.7■□□□□ 0.1
CCDC148-203ENST00000409889 NUDT16Q96DE0 195 aaKnown RBP15.7■□□□□ 0.1
CCDC148-203ENST00000409889 GIGYF1O75420 1035 aaPredicted RBP15.69■□□□□ 0.1
CCDC148-203ENST00000409889 PROM2Q8N271 834 aa15.69■□□□□ 0.1
CCDC148-203ENST00000409889 POLR3AO14802 1390 aaPredicted RBP15.69■□□□□ 0.1
CCDC148-203ENST00000409889 USP19O94966 1318 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms