RNA–Protein interactions for RNA: ENST00000408900.7

RAP1GDS1-204, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

TSL 1 (best) BASIC

Gene RAP1GDS1, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-204ENST00000408900 NSD3Q9BZ95 1437 aa8.91□□□□□ -0.98
RAP1GDS1-204ENST00000408900 HNRNPUQ00839 825 aaKnown RBP eCLIP8.9□□□□□ -0.98
RAP1GDS1-204ENST00000408900 NLRP13Q86W25 1043 aa8.9□□□□□ -0.98
RAP1GDS1-204ENST00000408900 PNISRQ8TF01 805 aaKnown RBP8.9□□□□□ -0.98
RAP1GDS1-204ENST00000408900 BRD4O60885 1362 aaPredicted RBP8.9□□□□□ -0.98
RAP1GDS1-204ENST00000408900 NCKAP5LQ9HCH0 1330 aa8.9□□□□□ -0.99
RAP1GDS1-204ENST00000408900 WASLO00401 505 aaPredicted RBP8.9□□□□□ -0.99
RAP1GDS1-204ENST00000408900 CABP1Q9NZU7 370 aa8.9□□□□□ -0.99
RAP1GDS1-204ENST00000408900 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.89□□□□□ -0.99
RAP1GDS1-204ENST00000408900 SENP3-EIF4A1A0A087X0R7 540 aa8.89□□□□□ -0.99
RAP1GDS1-204ENST00000408900 PPP2R1AP30153 589 aa8.89□□□□□ -0.99
RAP1GDS1-204ENST00000408900 ATAD2Q6PL18 1390 aa8.89□□□□□ -0.99
RAP1GDS1-204ENST00000408900 ANKRD36BQ8N2N9 1353 aa8.89□□□□□ -0.99
RAP1GDS1-204ENST00000408900 NPC1L1Q9UHC9 1359 aa8.89□□□□□ -0.99
RAP1GDS1-204ENST00000408900 KDM4FA0A1W2PPD8 638 aa8.88□□□□□ -0.99
RAP1GDS1-204ENST00000408900 A0A1W2PP64 1363 aa8.88□□□□□ -0.99
RAP1GDS1-204ENST00000408900 KCNA6P17658 529 aa8.88□□□□□ -0.99
RAP1GDS1-204ENST00000408900 IFNLR1Q8IU57 520 aaPredicted RBP8.88□□□□□ -0.99
RAP1GDS1-204ENST00000408900 TSPYL2Q9H2G4 693 aaPredicted RBP8.88□□□□□ -0.99
RAP1GDS1-204ENST00000408900 CD163L1Q9NR16 1453 aa8.87□□□□□ -0.99
RAP1GDS1-204ENST00000408900 DIP2AQ14689 1571 aa8.87□□□□□ -0.99
RAP1GDS1-204ENST00000408900 NUTM2FA1L443 756 aa8.87□□□□□ -0.99
RAP1GDS1-204ENST00000408900 TNNT2P45379 298 aaPredicted RBP8.87□□□□□ -0.99
RAP1GDS1-204ENST00000408900 ZNF579Q8NAF0 562 aaKnown RBP8.87□□□□□ -0.99
RAP1GDS1-204ENST00000408900 NUDT16Q96DE0 195 aaKnown RBP8.87□□□□□ -0.99
RAP1GDS1-204ENST00000408900 PRR36Q9H6K5 1346 aa8.87□□□□□ -0.99
RAP1GDS1-204ENST00000408900 CLCN6P51797 869 aa8.86□□□□□ -0.99
RAP1GDS1-204ENST00000408900 NUBP1P53384 320 aa8.86□□□□□ -0.99
RAP1GDS1-204ENST00000408900 FAM212AQ96EL1 285 aa8.86□□□□□ -0.99
RAP1GDS1-204ENST00000408900 TERF2IPQ9NYB0 399 aa8.86□□□□□ -0.99
RAP1GDS1-204ENST00000408900 NINLQ9Y2I6 1382 aa8.86□□□□□ -0.99
RAP1GDS1-204ENST00000408900 XRN1Q8IZH2 1706 aaKnown RBP8.86□□□□□ -0.99
RAP1GDS1-204ENST00000408900 HDGFL2Q7Z4V5 671 aaPredicted RBP8.86□□□□□ -0.99
RAP1GDS1-204ENST00000408900 MORC1Q86VD1 984 aa8.86□□□□□ -0.99
RAP1GDS1-204ENST00000408900 RASEFQ8IZ41 740 aa8.86□□□□□ -0.99
RAP1GDS1-204ENST00000408900 RBM33Q96EV2 1170 aaKnown RBP8.86□□□□□ -0.99
RAP1GDS1-204ENST00000408900 NPHP4O75161 1426 aaPredicted RBP8.85□□□□□ -0.99
RAP1GDS1-204ENST00000408900 CGNL1Q0VF96 1302 aa8.85□□□□□ -0.99
RAP1GDS1-204ENST00000408900 SPOCK2Q92563 424 aa8.85□□□□□ -0.99
RAP1GDS1-204ENST00000408900 HSPA2P54652 639 aa8.84□□□□□ -0.99
RAP1GDS1-204ENST00000408900 GGNBP2Q9H3C7 697 aa8.84□□□□□ -0.99
RAP1GDS1-204ENST00000408900 GTF3C3Q9Y5Q9 886 aa8.84□□□□□ -0.99
RAP1GDS1-204ENST00000408900 PTCH1Q13635 1447 aa8.84□□□□□ -0.99
RAP1GDS1-204ENST00000408900 PPIP5K1Q6PFW1 1433 aa8.84□□□□□ -0.99
RAP1GDS1-204ENST00000408900 USP32Q8NFA0 1604 aa8.84□□□□□ -0.99
RAP1GDS1-204ENST00000408900 CHD2O14647 1828 aaKnown RBP8.84□□□□□ -0.99
RAP1GDS1-204ENST00000408900 FYB1O15117 783 aa8.84□□□□□ -1
RAP1GDS1-204ENST00000408900 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.84□□□□□ -1
RAP1GDS1-204ENST00000408900 CCDC61Q9Y6R9 512 aa8.84□□□□□ -1
RAP1GDS1-204ENST00000408900 PIK3R4Q99570 1358 aa8.83□□□□□ -1
RAP1GDS1-204ENST00000408900 ADGRB2O60241 1585 aa8.83□□□□□ -1
RAP1GDS1-204ENST00000408900 ATP7BP35670 1465 aa8.83□□□□□ -1
RAP1GDS1-204ENST00000408900 CPSF1Q10570 1443 aaKnown RBP8.82□□□□□ -1
RAP1GDS1-204ENST00000408900 ADAMTS8Q9UP79 889 aa8.82□□□□□ -1
RAP1GDS1-204ENST00000408900 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
RAP1GDS1-204ENST00000408900 CDC42BPGQ6DT37 1551 aa8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 FBLN1P23142 703 aa8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 MTHFSP49914 203 aa8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 NME9Q86XW9 330 aa8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 PMFBP1Q8TBY8 1022 aa8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 SALL2Q9Y467 1007 aaPredicted RBP8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 ACEP12821 1306 aa8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 ZBED9Q6R2W3 1325 aa8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 RGPD8O14715 1765 aaPredicted RBP8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 NSD2O96028 1365 aa8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 PLEKHG3A1L390 1219 aa8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 GABBR2O75899 941 aa8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 WDR43Q15061 677 aaKnown RBP eCLIP8.8□□□□□ -1
RAP1GDS1-204ENST00000408900 NKTRP30414 1462 aaKnown RBP8.79□□□□□ -1
RAP1GDS1-204ENST00000408900 TOPAZ1Q8N9V7 1692 aa8.79□□□□□ -1
RAP1GDS1-204ENST00000408900 GSE1Q14687 1217 aa8.79□□□□□ -1
RAP1GDS1-204ENST00000408900 PHF12Q96QT6 1004 aa8.79□□□□□ -1
RAP1GDS1-204ENST00000408900 EDC4Q6P2E9 1401 aaKnown RBP8.79□□□□□ -1
RAP1GDS1-204ENST00000408900 AKAP12Q02952 1782 aa8.79□□□□□ -1
RAP1GDS1-204ENST00000408900 KIF20BQ96Q89 1820 aa8.79□□□□□ -1
RAP1GDS1-204ENST00000408900 ITSN1Q15811 1721 aa8.78□□□□□ -1
RAP1GDS1-204ENST00000408900 NALCNQ8IZF0 1738 aa8.78□□□□□ -1
RAP1GDS1-204ENST00000408900 MON2Q7Z3U7 1717 aa8.78□□□□□ -1
RAP1GDS1-204ENST00000408900 ANKRD26Q9UPS8 1709 aa8.78□□□□□ -1
RAP1GDS1-204ENST00000408900 PROSER2Q86WR7 435 aaPredicted RBP8.78□□□□□ -1
RAP1GDS1-204ENST00000408900 BLMP54132 1417 aaPredicted RBP8.77□□□□□ -1.01
RAP1GDS1-204ENST00000408900 POLR3AO14802 1390 aaPredicted RBP8.77□□□□□ -1.01
RAP1GDS1-204ENST00000408900 TTC21BQ7Z4L5 1316 aa8.77□□□□□ -1.01
RAP1GDS1-204ENST00000408900 CCDC146Q8IYE0 955 aa8.77□□□□□ -1.01
RAP1GDS1-204ENST00000408900 FMN2Q9NZ56 1722 aa8.77□□□□□ -1.01
RAP1GDS1-204ENST00000408900 LMTK3Q96Q04 1460 aa8.77□□□□□ -1.01
RAP1GDS1-204ENST00000408900 C14orf37Q86TY3 774 aa8.76□□□□□ -1.01
RAP1GDS1-204ENST00000408900 NGDNQ8NEJ9 315 aaKnown RBP8.76□□□□□ -1.01
RAP1GDS1-204ENST00000408900 SHPRHQ149N8 1683 aa8.76□□□□□ -1.01
RAP1GDS1-204ENST00000408900 NWD1Q149M9 1564 aa8.76□□□□□ -1.01
RAP1GDS1-204ENST00000408900 USP6P35125 1406 aa8.75□□□□□ -1.01
RAP1GDS1-204ENST00000408900 ADGRL3Q9HAR2 1447 aa8.75□□□□□ -1.01
RAP1GDS1-204ENST00000408900 CFAP53Q96M91 514 aa8.75□□□□□ -1.01
RAP1GDS1-204ENST00000408900 STRCP1A6NGW2 1772 aa8.75□□□□□ -1.01
RAP1GDS1-204ENST00000408900 ANKARQ7Z5J8 1434 aa8.75□□□□□ -1.01
RAP1GDS1-204ENST00000408900 INSRP06213 1382 aa8.75□□□□□ -1.01
RAP1GDS1-204ENST00000408900 PPM1GO15355 546 aaPredicted RBP8.74□□□□□ -1.01
RAP1GDS1-204ENST00000408900 COG3Q96JB2 828 aa8.74□□□□□ -1.01
RAP1GDS1-204ENST00000408900 POLKQ9UBT6 870 aa8.74□□□□□ -1.01
RAP1GDS1-204ENST00000408900 STRCQ7RTU9 1775 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms