RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 ACBD3Q9H3P7 528 aa25.68■■□□□ 1.7
ANKRD28-201ENST00000399451 MBD3O95983 291 aa25.67■■□□□ 1.7
ANKRD28-201ENST00000399451 MCM2P49736 904 aa25.67■■□□□ 1.7
ANKRD28-201ENST00000399451 EXOSC9Q06265 439 aaKnown RBP25.67■■□□□ 1.7
ANKRD28-201ENST00000399451 TMEM132AQ24JP5 1023 aa25.67■■□□□ 1.7
ANKRD28-201ENST00000399451 RABEP1Q15276 862 aa25.67■■□□□ 1.7
ANKRD28-201ENST00000399451 CAVIN1Q6NZI2 390 aaKnown RBP25.67■■□□□ 1.7
ANKRD28-201ENST00000399451 GAS2L2Q8NHY3 880 aa25.67■■□□□ 1.7
ANKRD28-201ENST00000399451 KDM4AO75164 1064 aa25.66■■□□□ 1.7
ANKRD28-201ENST00000399451 CT47A1Q5JQC4 288 aaPredicted RBP25.66■■□□□ 1.7
ANKRD28-201ENST00000399451 AK7Q96M32 723 aa25.66■■□□□ 1.7
ANKRD28-201ENST00000399451 RUFY1Q96T51 708 aa25.66■■□□□ 1.7
ANKRD28-201ENST00000399451 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.66■■□□□ 1.79e-7■■■■■ 155.8
ANKRD28-201ENST00000399451 CLASRPQ8N2M8 674 aaKnown RBP25.66■■□□□ 1.7
ANKRD28-201ENST00000399451 RNF214Q8ND24 703 aa25.66■■□□□ 1.7
ANKRD28-201ENST00000399451 ERICH3Q5RHP9 1530 aa25.65■■□□□ 1.7
ANKRD28-201ENST00000399451 TOM1L2Q6ZVM7 507 aa25.65■■□□□ 1.7
ANKRD28-201ENST00000399451 TSPY26PQ9H489 355 aa25.65■■□□□ 1.7
ANKRD28-201ENST00000399451 XBP1P17861 261 aa25.65■■□□□ 1.7
ANKRD28-201ENST00000399451 THEMISQ8N1K5 641 aaPredicted RBP25.65■■□□□ 1.7
ANKRD28-201ENST00000399451 NAP1L1P55209 391 aaKnown RBP25.64■■□□□ 1.7
ANKRD28-201ENST00000399451 ODF2Q5BJF6 829 aa25.64■■□□□ 1.7
ANKRD28-201ENST00000399451 SURF6O75683 361 aaKnown RBP25.64■■□□□ 1.69
ANKRD28-201ENST00000399451 SDF4Q9BRK5 362 aa25.64■■□□□ 1.69
ANKRD28-201ENST00000399451 HIP1O00291 1037 aa25.63■■□□□ 1.69
ANKRD28-201ENST00000399451 DDX54Q8TDD1 881 aaKnown RBP25.63■■□□□ 1.69
ANKRD28-201ENST00000399451 PRKAR2BP31323 418 aa25.63■■□□□ 1.69
ANKRD28-201ENST00000399451 NEK4P51957 841 aa25.63■■□□□ 1.69
ANKRD28-201ENST00000399451 PATL2C9JE40 543 aaKnown RBP25.63■■□□□ 1.69
ANKRD28-201ENST00000399451 AFAP1Q8N556 730 aa25.63■■□□□ 1.69
ANKRD28-201ENST00000399451 NOB1Q9ULX3 412 aaKnown RBP25.63■■□□□ 1.69
ANKRD28-201ENST00000399451 TWISTNBQ3B726 338 aaPredicted RBP25.62■■□□□ 1.69
ANKRD28-201ENST00000399451 DNAJC2Q99543 621 aaKnown RBP25.62■■□□□ 1.69
ANKRD28-201ENST00000399451 CNNM1Q9NRU3 951 aa25.62■■□□□ 1.69
ANKRD28-201ENST00000399451 EPS15P42566 896 aa25.62■■□□□ 1.69
ANKRD28-201ENST00000399451 PDILTQ8N807 584 aa25.62■■□□□ 1.69
ANKRD28-201ENST00000399451 CABP4P57796 275 aa25.61■■□□□ 1.69
ANKRD28-201ENST00000399451 CFAP70Q5T0N1 1121 aa25.61■■□□□ 1.69
ANKRD28-201ENST00000399451 SLC3A2P08195 630 aaKnown RBP25.61■■□□□ 1.69
ANKRD28-201ENST00000399451 WWC2Q6AWC2 1192 aa25.61■■□□□ 1.69
ANKRD28-201ENST00000399451 SART3Q15020 963 aaKnown RBP25.61■■□□□ 1.69
ANKRD28-201ENST00000399451 AKNAQ7Z591 1439 aa25.61■■□□□ 1.69
ANKRD28-201ENST00000399451 PRPF40AO75400 957 aaKnown RBP25.61■■□□□ 1.69
ANKRD28-201ENST00000399451 C1orf115Q9H7X2 142 aa25.6■■□□□ 1.69
ANKRD28-201ENST00000399451 CDR1P51861 262 aa25.6■■□□□ 1.69
ANKRD28-201ENST00000399451 MTERF4Q7Z6M4 381 aaKnown RBP25.6■■□□□ 1.69
ANKRD28-201ENST00000399451 HFM1A2PYH4 1435 aa25.6■■□□□ 1.69
ANKRD28-201ENST00000399451 CCDC173Q0VFZ6 552 aa25.59■■□□□ 1.69
ANKRD28-201ENST00000399451 PRAM1Q96QH2 718 aa25.59■■□□□ 1.69
ANKRD28-201ENST00000399451 TRIM5Q9C035 493 aa25.59■■□□□ 1.69
ANKRD28-201ENST00000399451 ERC1Q8IUD2 1116 aa25.59■■□□□ 1.69
ANKRD28-201ENST00000399451 GNAI2P04899 355 aa25.58■■□□□ 1.69
ANKRD28-201ENST00000399451 PDCP20941 246 aa25.58■■□□□ 1.69
ANKRD28-201ENST00000399451 HSP90B2PQ58FF3 399 aa25.58■■□□□ 1.69
ANKRD28-201ENST00000399451 TTC39AQ5SRH9 613 aa25.58■■□□□ 1.69
ANKRD28-201ENST00000399451 CFTRP13569 1480 aa25.58■■□□□ 1.69
ANKRD28-201ENST00000399451 EHBP1L1Q8N3D4 1523 aa25.58■■□□□ 1.69
ANKRD28-201ENST00000399451 GNL3LQ9NVN8 582 aaKnown RBP25.58■■□□□ 1.68
ANKRD28-201ENST00000399451 ARAP1Q96P48 1450 aa25.57■■□□□ 1.68
ANKRD28-201ENST00000399451 BCAR3O75815 825 aa25.57■■□□□ 1.68
ANKRD28-201ENST00000399451 KIAA1107Q9UPP5 1409 aa25.57■■□□□ 1.68
ANKRD28-201ENST00000399451 KINO60870 393 aaKnown RBP25.57■■□□□ 1.68
ANKRD28-201ENST00000399451 ATP2B2Q01814 1243 aa25.56■■□□□ 1.68
ANKRD28-201ENST00000399451 MAP7D2Q96T17 732 aa25.56■■□□□ 1.68
ANKRD28-201ENST00000399451 RRP12Q5JTH9 1297 aaKnown RBP25.56■■□□□ 1.68
ANKRD28-201ENST00000399451 ZFYVE27Q5T4F4 411 aa25.56■■□□□ 1.68
ANKRD28-201ENST00000399451 TSR2Q969E8 191 aaKnown RBP25.54■■□□□ 1.68
ANKRD28-201ENST00000399451 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
ANKRD28-201ENST00000399451 ZNF396Q96N95 335 aaPredicted RBP25.54■■□□□ 1.68
ANKRD28-201ENST00000399451 SMC2O95347 1197 aa25.54■■□□□ 1.68
ANKRD28-201ENST00000399451 RBM5P52756 815 aaKnown RBP eCLIP25.53■■□□□ 1.68
ANKRD28-201ENST00000399451 NBPF1Q3BBV0 1214 aa25.53■■□□□ 1.68
ANKRD28-201ENST00000399451 NOM1Q5C9Z4 860 aaKnown RBP25.53■■□□□ 1.68
ANKRD28-201ENST00000399451 CT47B1P0C2W7 299 aaPredicted RBP25.53■■□□□ 1.68
ANKRD28-201ENST00000399451 BACH2Q9BYV9 841 aa25.53■■□□□ 1.68
ANKRD28-201ENST00000399451 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
ANKRD28-201ENST00000399451 ANKLE2Q86XL3 938 aa25.53■■□□□ 1.68
ANKRD28-201ENST00000399451 BCL11BQ9C0K0 894 aaPredicted RBP25.53■■□□□ 1.68
ANKRD28-201ENST00000399451 SPG7Q9UQ90 795 aa25.53■■□□□ 1.68
ANKRD28-201ENST00000399451 CAGE1Q8TC20 777 aa25.52■■□□□ 1.68
ANKRD28-201ENST00000399451 CCP110O43303 1012 aa25.52■■□□□ 1.68
ANKRD28-201ENST00000399451 WDR63Q8IWG1 891 aa25.52■■□□□ 1.68
ANKRD28-201ENST00000399451 CCDC158Q5M9N0 1113 aa25.52■■□□□ 1.68
ANKRD28-201ENST00000399451 EFCAB5A4FU69 1503 aa25.51■■□□□ 1.67
ANKRD28-201ENST00000399451 CDK5RAP3Q96JB5 506 aa25.51■■□□□ 1.67
ANKRD28-201ENST00000399451 CCT4P50991 539 aaKnown RBP25.5■■□□□ 1.67
ANKRD28-201ENST00000399451 FIBPO43427 364 aa25.5■■□□□ 1.67
ANKRD28-201ENST00000399451 OFD1O75665 1012 aa25.5■■□□□ 1.67
ANKRD28-201ENST00000399451 ERCC4Q92889 916 aaPredicted RBP25.5■■□□□ 1.67
ANKRD28-201ENST00000399451 C9orf84Q5VXU9 1444 aa25.49■■□□□ 1.67
ANKRD28-201ENST00000399451 K7ELQ4 463 aaPredicted RBP25.49■■□□□ 1.67
ANKRD28-201ENST00000399451 BRPF3Q9ULD4 1205 aa25.49■■□□□ 1.67
ANKRD28-201ENST00000399451 ERBINQ96RT1 1412 aa25.49■■□□□ 1.67
ANKRD28-201ENST00000399451 PNISRQ8TF01 805 aaKnown RBP25.49■■□□□ 1.67
ANKRD28-201ENST00000399451 CDK19Q9BWU1 502 aa25.49■■□□□ 1.67
ANKRD28-201ENST00000399451 SLC4A2P04920 1241 aa25.49■■□□□ 1.67
ANKRD28-201ENST00000399451 AEBP1Q8IUX7 1158 aa25.48■■□□□ 1.67
ANKRD28-201ENST00000399451 GRIN2BQ13224 1484 aa25.48■■□□□ 1.67
ANKRD28-201ENST00000399451 LRRCC1Q9C099 1032 aa25.48■■□□□ 1.67
ANKRD28-201ENST00000399451 PAF1Q8N7H5 531 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms