RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 NOL10Q9BSC4 688 aaKnown RBP20.59■□□□□ 0.89
SIN3A-203ENST00000394949 NOB1Q9ULX3 412 aaKnown RBP20.59■□□□□ 0.89
SIN3A-203ENST00000394949 HIP1O00291 1037 aa20.58■□□□□ 0.89
SIN3A-203ENST00000394949 ATF3P18847 181 aa20.58■□□□□ 0.89
SIN3A-203ENST00000394949 SAFBQ15424 915 aaKnown RBP eCLIP20.58■□□□□ 0.89
SIN3A-203ENST00000394949 PDCL2Q8N4E4 241 aa20.58■□□□□ 0.89
SIN3A-203ENST00000394949 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.89
SIN3A-203ENST00000394949 NECTIN2Q92692 538 aa20.58■□□□□ 0.89
SIN3A-203ENST00000394949 ZNF428Q96B54 188 aa20.58■□□□□ 0.89
SIN3A-203ENST00000394949 AMOTL1Q8IY63 956 aa20.58■□□□□ 0.88
SIN3A-203ENST00000394949 PCMTD1Q96MG8 357 aaPredicted RBP20.58■□□□□ 0.88
SIN3A-203ENST00000394949 SYNJ2O15056 1496 aa20.57■□□□□ 0.88
SIN3A-203ENST00000394949 FIBPO43427 364 aa20.57■□□□□ 0.88
SIN3A-203ENST00000394949 HMOX1P09601 288 aa20.57■□□□□ 0.88
SIN3A-203ENST00000394949 CABP2Q9NPB3 220 aa20.57■□□□□ 0.88
SIN3A-203ENST00000394949 PDIA4P13667 645 aaKnown RBP20.57■□□□□ 0.88
SIN3A-203ENST00000394949 NLRP6P59044 892 aa20.57■□□□□ 0.88
SIN3A-203ENST00000394949 CFAP70Q5T0N1 1121 aa20.57■□□□□ 0.88
SIN3A-203ENST00000394949 SYNJ1O43426 1573 aa20.56■□□□□ 0.88
SIN3A-203ENST00000394949 CCDC27Q2M243 656 aa20.56■□□□□ 0.88
SIN3A-203ENST00000394949 CLASRPQ8N2M8 674 aaKnown RBP20.56■□□□□ 0.88
SIN3A-203ENST00000394949 PDCL3Q9H2J4 239 aa20.55■□□□□ 0.88
SIN3A-203ENST00000394949 ERBINQ96RT1 1412 aa20.55■□□□□ 0.88
SIN3A-203ENST00000394949 TWISTNBQ3B726 338 aaPredicted RBP20.55■□□□□ 0.88
SIN3A-203ENST00000394949 LEKR1Q6ZMV7 388 aa20.54■□□□□ 0.88
SIN3A-203ENST00000394949 NBPF1Q3BBV0 1214 aa20.54■□□□□ 0.88
SIN3A-203ENST00000394949 ZNF396Q96N95 335 aaPredicted RBP20.54■□□□□ 0.88
SIN3A-203ENST00000394949 VPS53Q5VIR6 699 aa20.53■□□□□ 0.88
SIN3A-203ENST00000394949 NCBP3Q53F19 620 aaKnown RBP20.53■□□□□ 0.88
SIN3A-203ENST00000394949 FBXW7Q969H0 707 aa20.53■□□□□ 0.88
SIN3A-203ENST00000394949 NLRP2Q9NX02 1062 aa20.53■□□□□ 0.88
SIN3A-203ENST00000394949 SYTL4Q96C24 671 aaPredicted RBP20.53■□□□□ 0.88
SIN3A-203ENST00000394949 KRT85P78386 507 aa20.52■□□□□ 0.88
SIN3A-203ENST00000394949 RALYLQ86SE5 291 aaKnown RBP20.52■□□□□ 0.88
SIN3A-203ENST00000394949 APPP05067 770 aa20.52■□□□□ 0.88
SIN3A-203ENST00000394949 SPC24Q8NBT2 197 aa20.52■□□□□ 0.88
SIN3A-203ENST00000394949 ARHGAP5Q13017 1502 aa20.52■□□□□ 0.88
SIN3A-203ENST00000394949 SMC2O95347 1197 aa20.52■□□□□ 0.87
SIN3A-203ENST00000394949 GNAI2P04899 355 aa20.51■□□□□ 0.87
SIN3A-203ENST00000394949 ANKRD1Q15327 319 aa20.51■□□□□ 0.87
SIN3A-203ENST00000394949 NAIPQ13075 1403 aa20.51■□□□□ 0.87
SIN3A-203ENST00000394949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.51■□□□□ 0.87
SIN3A-203ENST00000394949 CCDC30Q5VVM6 783 aa20.51■□□□□ 0.87
SIN3A-203ENST00000394949 VPS37DQ86XT2 251 aa20.51■□□□□ 0.87
SIN3A-203ENST00000394949 PDILTQ8N807 584 aa20.5■□□□□ 0.87
SIN3A-203ENST00000394949 GAS2L2Q8NHY3 880 aa20.5■□□□□ 0.87
SIN3A-203ENST00000394949 TNMDQ9H2S6 317 aa20.5■□□□□ 0.87
SIN3A-203ENST00000394949 SURF6O75683 361 aaKnown RBP20.5■□□□□ 0.87
SIN3A-203ENST00000394949 NFXL1Q6ZNB6 911 aa20.5■□□□□ 0.87
SIN3A-203ENST00000394949 SRCIN1Q9C0H9 1055 aa20.5■□□□□ 0.87
SIN3A-203ENST00000394949 PRKAR2BP31323 418 aa20.5■□□□□ 0.87
SIN3A-203ENST00000394949 RIC3Q7Z5B4 369 aa20.5■□□□□ 0.87
SIN3A-203ENST00000394949 UBE2Q2Q8WVN8 375 aa20.5■□□□□ 0.87
SIN3A-203ENST00000394949 TSR2Q969E8 191 aaKnown RBP20.5■□□□□ 0.87
SIN3A-203ENST00000394949 PRG4Q92954 1404 aaPredicted RBP20.49■□□□□ 0.87
SIN3A-203ENST00000394949 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
SIN3A-203ENST00000394949 CYP46A1Q9Y6A2 500 aa20.49■□□□□ 0.87
SIN3A-203ENST00000394949 ERICH2A1L162 156 aa20.49■□□□□ 0.87
SIN3A-203ENST00000394949 MCM5P33992 734 aa20.49■□□□□ 0.87
SIN3A-203ENST00000394949 FSD1Q9BTV5 496 aa20.49■□□□□ 0.87
SIN3A-203ENST00000394949 ERC1Q8IUD2 1116 aa20.48■□□□□ 0.87
SIN3A-203ENST00000394949 C1orf115Q9H7X2 142 aa20.48■□□□□ 0.87
SIN3A-203ENST00000394949 GPRASP1Q5JY77 1395 aa20.48■□□□□ 0.87
SIN3A-203ENST00000394949 CCT4P50991 539 aaKnown RBP20.48■□□□□ 0.87
SIN3A-203ENST00000394949 H0YHG0 523 aa20.48■□□□□ 0.87
SIN3A-203ENST00000394949 TXNDC2Q86VQ3 553 aa20.48■□□□□ 0.87
SIN3A-203ENST00000394949 SLC52A1Q9NWF4 448 aa20.48■□□□□ 0.87
SIN3A-203ENST00000394949 SMARCE1Q969G3 411 aa20.47■□□□□ 0.87
SIN3A-203ENST00000394949 ZSCAN31Q96LW9 406 aaPredicted RBP20.47■□□□□ 0.87
SIN3A-203ENST00000394949 DHX16O60231 1041 aaKnown RBP20.46■□□□□ 0.87
SIN3A-203ENST00000394949 NCOA1Q15788 1441 aa20.46■□□□□ 0.87
SIN3A-203ENST00000394949 WWC1Q8IX03 1113 aa20.46■□□□□ 0.87
SIN3A-203ENST00000394949 DCTN1Q14203 1278 aa20.46■□□□□ 0.87
SIN3A-203ENST00000394949 LRRCC1Q9C099 1032 aa20.46■□□□□ 0.87
SIN3A-203ENST00000394949 FILIP1LQ4L180 1135 aa20.46■□□□□ 0.87
SIN3A-203ENST00000394949 TBC1D2Q9BYX2 928 aa20.46■□□□□ 0.87
SIN3A-203ENST00000394949 KIF2AO00139 706 aaPredicted RBP20.45■□□□□ 0.86
SIN3A-203ENST00000394949 FOSBP53539 338 aa20.45■□□□□ 0.86
SIN3A-203ENST00000394949 RPAP2Q8IXW5 612 aaPredicted RBP20.45■□□□□ 0.86
SIN3A-203ENST00000394949 TRIM34Q9BYJ4 488 aa20.45■□□□□ 0.86
SIN3A-203ENST00000394949 CALRP27797 417 aaKnown RBP20.45■□□□□ 0.86
SIN3A-203ENST00000394949 JMYQ8N9B5 988 aa20.45■□□□□ 0.86
SIN3A-203ENST00000394949 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
SIN3A-203ENST00000394949 NKTRP30414 1462 aaKnown RBP20.44■□□□□ 0.86
SIN3A-203ENST00000394949 RDXP35241 583 aaKnown RBP20.44■□□□□ 0.86
SIN3A-203ENST00000394949 PIP4K2AP48426 406 aaPredicted RBP20.44■□□□□ 0.86
SIN3A-203ENST00000394949 ERLIN1O75477 346 aa20.44■□□□□ 0.86
SIN3A-203ENST00000394949 CAGE1Q8TC20 777 aa20.44■□□□□ 0.86
SIN3A-203ENST00000394949 C9orf84Q5VXU9 1444 aa20.44■□□□□ 0.86
SIN3A-203ENST00000394949 MAP3K1Q13233 1512 aa20.43■□□□□ 0.86
SIN3A-203ENST00000394949 NUP62CLQ9H1M0 184 aa20.43■□□□□ 0.86
SIN3A-203ENST00000394949 EIF3JO75822 258 aaKnown RBP20.43■□□□□ 0.86
SIN3A-203ENST00000394949 PDE4CQ08493 712 aa20.43■□□□□ 0.86
SIN3A-203ENST00000394949 ABTB2Q8N961 1025 aa20.43■□□□□ 0.86
SIN3A-203ENST00000394949 PODXL2Q9NZ53 605 aa20.43■□□□□ 0.86
SIN3A-203ENST00000394949 DAPK1P53355 1430 aa20.43■□□□□ 0.86
SIN3A-203ENST00000394949 TROQ12816 1431 aaPredicted RBP20.43■□□□□ 0.86
SIN3A-203ENST00000394949 XBP1P17861 261 aa20.43■□□□□ 0.86
SIN3A-203ENST00000394949 STK38Q15208 465 aa20.43■□□□□ 0.86
SIN3A-203ENST00000394949 PLEKHO1Q53GL0 409 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms