RNA–Protein interactions for RNA: ENST00000393883.6

ZNF559-202, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-202ENST00000393883 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
ZNF559-202ENST00000393883 DDX54Q8TDD1 881 aaKnown RBP17.64■□□□□ 0.41
ZNF559-202ENST00000393883 CNNM1Q9NRU3 951 aa17.64■□□□□ 0.41
ZNF559-202ENST00000393883 TCP11L2Q8N4U5 519 aa17.64■□□□□ 0.41
ZNF559-202ENST00000393883 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.64■□□□□ 0.41
ZNF559-202ENST00000393883 FOXD4L1Q9NU39 408 aa17.64■□□□□ 0.41
ZNF559-202ENST00000393883 HDGFL1Q5TGJ6 251 aa17.63■□□□□ 0.41
ZNF559-202ENST00000393883 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
ZNF559-202ENST00000393883 LRPPRCP42704 1394 aaKnown RBP17.63■□□□□ 0.41
ZNF559-202ENST00000393883 PLIN1O60240 522 aa17.63■□□□□ 0.41
ZNF559-202ENST00000393883 IKQ13123 557 aaPredicted RBP17.63■□□□□ 0.41
ZNF559-202ENST00000393883 AKNAQ7Z591 1439 aa17.63■□□□□ 0.41
ZNF559-202ENST00000393883 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
ZNF559-202ENST00000393883 CCDC70Q6NSX1 233 aa17.62■□□□□ 0.41
ZNF559-202ENST00000393883 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
ZNF559-202ENST00000393883 FSD1Q9BTV5 496 aa17.62■□□□□ 0.41
ZNF559-202ENST00000393883 CCT4P50991 539 aaKnown RBP17.61■□□□□ 0.41
ZNF559-202ENST00000393883 SULT6B1Q6IMI4 303 aa17.61■□□□□ 0.41
ZNF559-202ENST00000393883 SMC3Q9UQE7 1217 aa17.61■□□□□ 0.41
ZNF559-202ENST00000393883 PPP1R1BQ9UD71 204 aaPredicted RBP17.61■□□□□ 0.41
ZNF559-202ENST00000393883 IQGAP2Q13576 1575 aa17.61■□□□□ 0.41
ZNF559-202ENST00000393883 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
ZNF559-202ENST00000393883 TWISTNBQ3B726 338 aaPredicted RBP17.61■□□□□ 0.41
ZNF559-202ENST00000393883 SURF6O75683 361 aaKnown RBP17.6■□□□□ 0.41
ZNF559-202ENST00000393883 PPP2R1AP30153 589 aa17.6■□□□□ 0.41
ZNF559-202ENST00000393883 EXOC6Q8TAG9 804 aa17.6■□□□□ 0.41
ZNF559-202ENST00000393883 ZSCAN25Q6NSZ9 544 aa17.6■□□□□ 0.41
ZNF559-202ENST00000393883 FAM177BA6PVY3 158 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 FYB1O15117 783 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 STARD3NLO95772 234 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 GNAI2P04899 355 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 NACAP1Q9BZK3 213 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 CDC45O75419 566 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 RSPH6AQ9H0K4 717 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 ZNF652Q9Y2D9 606 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 DDX49Q9Y6V7 483 aaKnown RBP17.59■□□□□ 0.41
ZNF559-202ENST00000393883 WWC2Q6AWC2 1192 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 MPHOSPH8Q99549 860 aa17.59■□□□□ 0.41
ZNF559-202ENST00000393883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.58■□□□□ 0.41
ZNF559-202ENST00000393883 PCMTD1Q96MG8 357 aaPredicted RBP17.58■□□□□ 0.41
ZNF559-202ENST00000393883 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.41
ZNF559-202ENST00000393883 ADGRL1O94910 1474 aa17.58■□□□□ 0.4
ZNF559-202ENST00000393883 TTC39AQ5SRH9 613 aa17.58■□□□□ 0.4
ZNF559-202ENST00000393883 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
ZNF559-202ENST00000393883 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
ZNF559-202ENST00000393883 NUCB2P80303 420 aa17.57■□□□□ 0.4
ZNF559-202ENST00000393883 SRCIN1Q9C0H9 1055 aa17.57■□□□□ 0.4
ZNF559-202ENST00000393883 CCDC73Q6ZRK6 1079 aa17.57■□□□□ 0.4
ZNF559-202ENST00000393883 FOXD4L5Q5VV16 416 aaPredicted RBP17.57■□□□□ 0.4
ZNF559-202ENST00000393883 BICD2Q8TD16 824 aa17.57■□□□□ 0.4
ZNF559-202ENST00000393883 FOXD4L4Q8WXT5 416 aaPredicted RBP17.57■□□□□ 0.4
ZNF559-202ENST00000393883 SLC12A5Q9H2X9 1139 aa17.57■□□□□ 0.4
ZNF559-202ENST00000393883 PDE4AP27815 886 aa17.56■□□□□ 0.4
ZNF559-202ENST00000393883 NUDT16Q96DE0 195 aaKnown RBP17.56■□□□□ 0.4
ZNF559-202ENST00000393883 CCDC57Q2TAC2 916 aa17.56■□□□□ 0.4
ZNF559-202ENST00000393883 DENND4BO75064 1496 aaPredicted RBP17.55■□□□□ 0.4
ZNF559-202ENST00000393883 PDE4CQ08493 712 aa17.55■□□□□ 0.4
ZNF559-202ENST00000393883 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
ZNF559-202ENST00000393883 CUL7Q14999 1698 aa17.54■□□□□ 0.4
ZNF559-202ENST00000393883 GCC1Q96CN9 775 aa17.54■□□□□ 0.4
ZNF559-202ENST00000393883 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.54■□□□□ 0.4
ZNF559-202ENST00000393883 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
ZNF559-202ENST00000393883 WDR63Q8IWG1 891 aa17.54■□□□□ 0.4
ZNF559-202ENST00000393883 FCHSD2O94868 740 aa17.54■□□□□ 0.4
ZNF559-202ENST00000393883 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
ZNF559-202ENST00000393883 WDHD1O75717 1129 aaPredicted RBP17.53■□□□□ 0.4
ZNF559-202ENST00000393883 AMOTQ4VCS5 1084 aa17.53■□□□□ 0.4
ZNF559-202ENST00000393883 TMOD2Q9NZR1 351 aa17.53■□□□□ 0.4
ZNF559-202ENST00000393883 PLB1Q6P1J6 1458 aa17.53■□□□□ 0.4
ZNF559-202ENST00000393883 VPS37CA5D8V6 355 aaPredicted RBP17.52■□□□□ 0.4
ZNF559-202ENST00000393883 MCM2P49736 904 aa17.52■□□□□ 0.39
ZNF559-202ENST00000393883 NBPF1Q3BBV0 1214 aa17.52■□□□□ 0.39
ZNF559-202ENST00000393883 SLC4A2P04920 1241 aa17.52■□□□□ 0.39
ZNF559-202ENST00000393883 DNAJC2Q99543 621 aaKnown RBP17.51■□□□□ 0.39
ZNF559-202ENST00000393883 BTBD11A6QL63 1104 aa17.51■□□□□ 0.39
ZNF559-202ENST00000393883 PDCP20941 246 aa17.51■□□□□ 0.39
ZNF559-202ENST00000393883 IGHMBP2P38935 993 aaKnown RBP17.51■□□□□ 0.39
ZNF559-202ENST00000393883 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
ZNF559-202ENST00000393883 KIF14Q15058 1648 aa17.51■□□□□ 0.39
ZNF559-202ENST00000393883 PHF8Q9UPP1 1060 aa17.5■□□□□ 0.39
ZNF559-202ENST00000393883 TXLNAP40222 546 aa17.5■□□□□ 0.39
ZNF559-202ENST00000393883 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
ZNF559-202ENST00000393883 TIAM1Q13009 1591 aa17.5■□□□□ 0.39
ZNF559-202ENST00000393883 TEX14Q8IWB6 1497 aa17.5■□□□□ 0.39
ZNF559-202ENST00000393883 TMOD3Q9NYL9 352 aa17.5■□□□□ 0.39
ZNF559-202ENST00000393883 CHMP5Q9NZZ3 219 aa17.5■□□□□ 0.39
ZNF559-202ENST00000393883 CADPS2Q86UW7 1296 aa17.49■□□□□ 0.39
ZNF559-202ENST00000393883 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
ZNF559-202ENST00000393883 ZC3H6P61129 1189 aaKnown RBP17.49■□□□□ 0.39
ZNF559-202ENST00000393883 PKNOX2Q96KN3 472 aa17.49■□□□□ 0.39
ZNF559-202ENST00000393883 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
ZNF559-202ENST00000393883 ZPR1O75312 459 aa17.48■□□□□ 0.39
ZNF559-202ENST00000393883 HSP90AA2PQ14568 343 aaPredicted RBP17.48■□□□□ 0.39
ZNF559-202ENST00000393883 HSP90AB3PQ58FF7 597 aa17.48■□□□□ 0.39
ZNF559-202ENST00000393883 SASS6Q6UVJ0 657 aa17.48■□□□□ 0.39
ZNF559-202ENST00000393883 CT47A1Q5JQC4 288 aaPredicted RBP17.47■□□□□ 0.39
ZNF559-202ENST00000393883 CDK5RAP3Q96JB5 506 aa17.47■□□□□ 0.39
ZNF559-202ENST00000393883 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
ZNF559-202ENST00000393883 NGLY1Q96IV0 654 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms