RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 TMEM63CQ9P1W3 806 aa21.09■□□□□ 0.97
PTPA-207ENST00000393370 KIF16BQ96L93 1317 aa21.08■□□□□ 0.97
PTPA-207ENST00000393370 ITPRIPQ8IWB1 547 aa21.08■□□□□ 0.97
PTPA-207ENST00000393370 NUP160Q12769 1436 aa21.07■□□□□ 0.96
PTPA-207ENST00000393370 VGLL3A8MV65 326 aa21.07■□□□□ 0.96
PTPA-207ENST00000393370 CYP2E1P05181 493 aaPredicted RBP21.07■□□□□ 0.96
PTPA-207ENST00000393370 NUCB1Q02818 461 aa21.07■□□□□ 0.96
PTPA-207ENST00000393370 CDCA8Q53HL2 280 aa21.07■□□□□ 0.96
PTPA-207ENST00000393370 SHANK2Q9UPX8 1470 aa21.07■□□□□ 0.96
PTPA-207ENST00000393370 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
PTPA-207ENST00000393370 HMGN5P82970 282 aaKnown RBP21.06■□□□□ 0.96
PTPA-207ENST00000393370 WDR63Q8IWG1 891 aa21.06■□□□□ 0.96
PTPA-207ENST00000393370 TRIM27P14373 513 aa21.06■□□□□ 0.96
PTPA-207ENST00000393370 NUCB2P80303 420 aa21.06■□□□□ 0.96
PTPA-207ENST00000393370 BMP2KLQ5H9B9 411 aa21.06■□□□□ 0.96
PTPA-207ENST00000393370 MPNDQ8N594 471 aa21.06■□□□□ 0.96
PTPA-207ENST00000393370 NSFL1CQ9UNZ2 370 aaKnown RBP21.06■□□□□ 0.96
PTPA-207ENST00000393370 MYO5CQ9NQX4 1742 aa21.05■□□□□ 0.96
PTPA-207ENST00000393370 RAPGEF6Q8TEU7 1601 aa21.05■□□□□ 0.96
PTPA-207ENST00000393370 RUNDC1Q96C34 613 aa21.05■□□□□ 0.96
PTPA-207ENST00000393370 CHAMP1Q96JM3 812 aa21.05■□□□□ 0.96
PTPA-207ENST00000393370 CDC42BPAQ5VT25 1732 aa21.05■□□□□ 0.96
PTPA-207ENST00000393370 ZBTB22O15209 634 aa21.05■□□□□ 0.96
PTPA-207ENST00000393370 TBC1D9Q6ZT07 1266 aa21.05■□□□□ 0.96
PTPA-207ENST00000393370 KIF3AQ9Y496 699 aa21.05■□□□□ 0.96
PTPA-207ENST00000393370 IPO4Q8TEX9 1081 aaKnown RBP21.04■□□□□ 0.96
PTPA-207ENST00000393370 DDX19BQ9UMR2 479 aa21.04■□□□□ 0.96
PTPA-207ENST00000393370 CHD1O14646 1710 aa21.04■□□□□ 0.96
PTPA-207ENST00000393370 BCL2L12Q9HB09 334 aa21.04■□□□□ 0.96
PTPA-207ENST00000393370 CHD1LQ86WJ1 897 aa21.03■□□□□ 0.96
PTPA-207ENST00000393370 ZNF830Q96NB3 372 aaPredicted RBP21.03■□□□□ 0.96
PTPA-207ENST00000393370 CGNQ9P2M7 1197 aaKnown RBP21.03■□□□□ 0.96
PTPA-207ENST00000393370 RNF17Q9BXT8 1623 aaKnown RBP21.02■□□□□ 0.96
PTPA-207ENST00000393370 MYOM1P52179 1685 aa21.02■□□□□ 0.96
PTPA-207ENST00000393370 JPH4Q96JJ6 628 aa21.02■□□□□ 0.96
PTPA-207ENST00000393370 NOLC1Q14978 699 aaKnown RBP eCLIP21.02■□□□□ 0.96
PTPA-207ENST00000393370 C17orf53Q8N3J3 647 aaPredicted RBP21.02■□□□□ 0.96
PTPA-207ENST00000393370 PIBF1Q8WXW3 757 aa21.01■□□□□ 0.95
PTPA-207ENST00000393370 CARD14Q9BXL6 1004 aa21.01■□□□□ 0.95
PTPA-207ENST00000393370 SMC4Q9NTJ3 1288 aa21.01■□□□□ 0.95
PTPA-207ENST00000393370 POLR3AO14802 1390 aaPredicted RBP21.01■□□□□ 0.95
PTPA-207ENST00000393370 PDCL2Q8N4E4 241 aa21.01■□□□□ 0.95
PTPA-207ENST00000393370 HNRNPMP52272 730 aaKnown RBP eCLIP21■□□□□ 0.952e-7■■□□□ 14.1
PTPA-207ENST00000393370 IQSEC2Q5JU85 1478 aa21■□□□□ 0.95
PTPA-207ENST00000393370 U2AF2P26368 475 aaKnown RBP eCLIP21■□□□□ 0.95
PTPA-207ENST00000393370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.95
PTPA-207ENST00000393370 ZBTB40Q9NUA8 1239 aa20.99■□□□□ 0.95
PTPA-207ENST00000393370 DISP1Q96F81 1524 aa20.99■□□□□ 0.95
PTPA-207ENST00000393370 TAF3Q5VWG9 929 aa20.98■□□□□ 0.95
PTPA-207ENST00000393370 KANK1Q14678 1352 aa20.98■□□□□ 0.95
PTPA-207ENST00000393370 TMEM57Q8N5G2 664 aa20.98■□□□□ 0.95
PTPA-207ENST00000393370 ZDHHC9Q9Y397 364 aa20.98■□□□□ 0.95
PTPA-207ENST00000393370 ATF7IPQ6VMQ6 1270 aa20.97■□□□□ 0.95
PTPA-207ENST00000393370 TSR2Q969E8 191 aaKnown RBP20.97■□□□□ 0.95
PTPA-207ENST00000393370 KIAA0556O60303 1618 aa20.97■□□□□ 0.95
PTPA-207ENST00000393370 ZGPATQ8N5A5 531 aaKnown RBP20.97■□□□□ 0.95
PTPA-207ENST00000393370 OSCARQ8IYS5 282 aa20.96■□□□□ 0.95
PTPA-207ENST00000393370 SSH1Q8WYL5 1049 aa20.96■□□□□ 0.95
PTPA-207ENST00000393370 TTC12Q9H892 705 aaPredicted RBP20.96■□□□□ 0.95
PTPA-207ENST00000393370 PLCD3Q8N3E9 789 aa20.95■□□□□ 0.94
PTPA-207ENST00000393370 IQGAP1P46940 1657 aa20.95■□□□□ 0.94
PTPA-207ENST00000393370 ANKRD45Q5TZF3 282 aa20.95■□□□□ 0.94
PTPA-207ENST00000393370 ZNF771Q7L3S4 317 aaPredicted RBP20.95■□□□□ 0.94
PTPA-207ENST00000393370 NOB1Q9ULX3 412 aaKnown RBP20.95■□□□□ 0.94
PTPA-207ENST00000393370 CCDC27Q2M243 656 aa20.94■□□□□ 0.94
PTPA-207ENST00000393370 CFAP74Q9C0B2 1584 aa20.94■□□□□ 0.94
PTPA-207ENST00000393370 FKBP5Q13451 457 aaPredicted RBP20.94■□□□□ 0.94
PTPA-207ENST00000393370 RABEP1Q15276 862 aa20.94■□□□□ 0.94
PTPA-207ENST00000393370 TSPY26PQ9H489 355 aa20.93■□□□□ 0.94
PTPA-207ENST00000393370 SHPRHQ149N8 1683 aa20.93■□□□□ 0.94
PTPA-207ENST00000393370 EXOSC9Q06265 439 aaKnown RBP20.92■□□□□ 0.94
PTPA-207ENST00000393370 FOXD4L5Q5VV16 416 aaPredicted RBP20.91■□□□□ 0.94
PTPA-207ENST00000393370 FOXD4L4Q8WXT5 416 aaPredicted RBP20.91■□□□□ 0.94
PTPA-207ENST00000393370 CWC22Q9HCG8 908 aaKnown RBP20.91■□□□□ 0.94
PTPA-207ENST00000393370 SCAF11Q99590 1463 aaKnown RBP20.91■□□□□ 0.94
PTPA-207ENST00000393370 ANKRD7Q92527 254 aa20.91■□□□□ 0.94
PTPA-207ENST00000393370 SPTLC3Q9NUV7 552 aa20.91■□□□□ 0.94
PTPA-207ENST00000393370 PLB1Q6P1J6 1458 aa20.89■□□□□ 0.93
PTPA-207ENST00000393370 RIOK3O14730 519 aaKnown RBP20.89■□□□□ 0.93
PTPA-207ENST00000393370 CDC45O75419 566 aa20.88■□□□□ 0.93
PTPA-207ENST00000393370 MBD3O95983 291 aa20.88■□□□□ 0.93
PTPA-207ENST00000393370 CDK11BP21127 795 aaKnown RBP20.88■□□□□ 0.93
PTPA-207ENST00000393370 USP25Q9UHP3 1055 aa20.88■□□□□ 0.93
PTPA-207ENST00000393370 CT47B1P0C2W7 299 aaPredicted RBP20.88■□□□□ 0.93
PTPA-207ENST00000393370 IRX5P78411 483 aaPredicted RBP20.87■□□□□ 0.93
PTPA-207ENST00000393370 TAF7LQ5H9L4 462 aa20.86■□□□□ 0.93
PTPA-207ENST00000393370 KDM5AP29375 1690 aaKnown RBP20.86■□□□□ 0.93
PTPA-207ENST00000393370 MORC1Q86VD1 984 aa20.85■□□□□ 0.93
PTPA-207ENST00000393370 FEZ1Q99689 392 aa20.85■□□□□ 0.93
PTPA-207ENST00000393370 CEP152O94986 1710 aa20.85■□□□□ 0.93
PTPA-207ENST00000393370 MADDQ8WXG6 1647 aa20.85■□□□□ 0.93
PTPA-207ENST00000393370 MAPK8IP2Q13387 824 aaPredicted RBP20.84■□□□□ 0.93
PTPA-207ENST00000393370 OGFRQ9NZT2 677 aa20.84■□□□□ 0.93
PTPA-207ENST00000393370 ADCY5O95622 1261 aa20.84■□□□□ 0.93
PTPA-207ENST00000393370 GSPT1P15170 499 aaKnown RBP20.84■□□□□ 0.93
PTPA-207ENST00000393370 KCNJ4P48050 445 aa20.84■□□□□ 0.93
PTPA-207ENST00000393370 PPIP5K1Q6PFW1 1433 aa20.83■□□□□ 0.93
PTPA-207ENST00000393370 USP26Q9BXU7 913 aa20.83■□□□□ 0.93
PTPA-207ENST00000393370 C1orf115Q9H7X2 142 aa20.83■□□□□ 0.93
PTPA-207ENST00000393370 CTIFO43310 598 aaKnown RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms