RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 KRTAP29-1A8MX34 341 aaPredicted RBP0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 NBPF26B4DH59 902 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 OIP5O43482 229 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 UPP2O95045 317 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 APBA3O96018 575 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 AMHP03971 560 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 SPATA31C1P0DKV0 1188 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 SSTR4P31391 388 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 CD97P48960 835 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 CTSWP56202 376 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 WNT7BP56706 349 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 FOXK1P85037 733 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 PTSQ03393 145 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 TRIM32Q13049 653 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 HNRNPA0Q13151 305 aaKnown RBP0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 GAS6Q14393 721 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 ZNF124Q15973 351 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 ERFEQ4G0M1 354 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 ZNF648Q5T619 568 aaPredicted RBP0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 RIC3Q7Z5B4 369 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 PLPP6Q8IY26 295 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 MICALL1Q8N3F8 863 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 CCDC155Q8N6L0 562 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 ZSCAN18Q8TBC5 510 aaPredicted RBP0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 OXER1Q8TDS5 423 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 TRIM52Q96A61 297 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 ACDQ96AP0 544 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 TOX2Q96NM4 488 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 NACC1Q96RE7 527 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 SUV39H2Q9H5I1 410 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 DNMT3LQ9UJW3 386 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 NSFL1CQ9UNZ2 370 aaKnown RBP0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 IGF1RP08069 1367 aa0.3□□□□□ -2.36
TRAJ28-201ENST00000390509 MUC5BQ9HC84 5762 aaPredicted RBP0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 SPDYE3A6NKU9 549 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 KIAA1324LA8MWY0 1029 aaPredicted RBP0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 SHISA8B8ZZ34 492 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 ACTN4O43707 911 aaKnown RBP0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 FARP2O94887 1054 aaPredicted RBP0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 ADH1CP00326 375 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 BMP2P12643 396 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 JUNBP17275 347 aaPredicted RBP0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 AMPD1P23109 780 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 KRTAP10-6P60371 365 aaPredicted RBP0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 MAP3K9P80192 1104 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 KMT5BQ4FZB7 885 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 C6orf118Q5T5N4 469 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 LCE1EQ5T753 118 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 RC3H1Q5TC82 1133 aaKnown RBP0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 FOXR1Q6PIV2 292 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 LINC00114Q6XXX2 140 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 GGNQ86UU5 652 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 SIAH1Q8IUQ4 282 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 KSR1Q8IVT5 923 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 FBXO22Q8NEZ5 403 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 UPF1Q92900 1129 aaKnown RBP eCLIP0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 VWCEQ96DN2 955 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 MYRFLQ96LU7 910 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 TRERF1Q96PN7 1200 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 SLC4A9Q96Q91 983 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 OXCT2Q9BYC2 517 aaPredicted RBP0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 LMCD1Q9NZU5 365 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 SRRDQ9UH36 339 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 ADGRE2Q9UHX3 823 aa0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 SOS2Q07890 1332 aaPredicted RBP0.29□□□□□ -2.36
TRAJ28-201ENST00000390509 SENP3-EIF4A1A0A087X0R7 540 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 SLC35F4A4IF30 521 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 TTLL8A6PVC2 850 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 SMAPO00193 183 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 AKAP8O43823 692 aaKnown RBP0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 EVI5O60447 810 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 PHF14O94880 888 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 ADRB1P08588 477 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 INHBBP09529 407 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 TIMP2P16035 220 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 SYN1P17600 705 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 ITGB5P18084 799 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 MAP2K3P46734 347 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 DGKGP49619 791 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 WDR4P57081 412 aaKnown RBP0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 DSG2Q14126 1118 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 PRRT3Q5FWE3 981 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 C6orf132Q5T0Z8 1188 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 SWT1Q5T5J6 900 aaKnown RBP0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 GIGYF2Q6Y7W6 1299 aaKnown RBP0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 LCNL1Q6ZST4 164 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 BHLHA9Q7RTU4 235 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 SLC51AQ86UW1 340 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 LRRC56Q8IYG6 542 aaPredicted RBP0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 LINC00528Q8N1L1 170 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 TRIM41Q8WV44 630 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 TATDN2Q93075 761 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 RELTQ969Z4 430 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 SPSB2Q99619 263 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 SLC38A3Q99624 504 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 EPAS1Q99814 870 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 MENTQ9BUN1 341 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 SLC4A1APQ9BWU0 796 aaKnown RBP0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 TSKSQ9UJT2 592 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 GDF2Q9UK05 429 aaPredicted RBP0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms