RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 DISP2A7MBM2 1401 aa31.69■■■□□ 2.66
CNEP1R1-201ENST00000389134 TNS1Q9HBL0 1735 aaKnown RBP31.68■■■□□ 2.66
CNEP1R1-201ENST00000389134 THSD7AQ9UPZ6 1657 aa31.67■■■□□ 2.66
CNEP1R1-201ENST00000389134 FAM182BQ5T319 152 aa31.67■■■□□ 2.66
CNEP1R1-201ENST00000389134 CRYBG1Q9Y4K1 1723 aa31.66■■■□□ 2.66
CNEP1R1-201ENST00000389134 R3HDM1Q15032 1099 aaKnown RBP31.66■■■□□ 2.66
CNEP1R1-201ENST00000389134 HIRIP3Q9BW71 556 aaPredicted RBP31.64■■■□□ 2.66
CNEP1R1-201ENST00000389134 TULP4Q9NRJ4 1543 aa31.63■■■□□ 2.65
CNEP1R1-201ENST00000389134 ADGRB1O14514 1584 aa31.62■■■□□ 2.65
CNEP1R1-201ENST00000389134 PRR36Q9H6K5 1346 aa31.62■■■□□ 2.65
CNEP1R1-201ENST00000389134 PRDM11Q9NQV5 511 aa31.62■■■□□ 2.65
CNEP1R1-201ENST00000389134 TRAK1Q9UPV9 953 aa31.62■■■□□ 2.65
CNEP1R1-201ENST00000389134 MINK1Q8N4C8 1332 aaPredicted RBP31.6■■■□□ 2.65
CNEP1R1-201ENST00000389134 PAK3O75914 559 aaPredicted RBP31.6■■■□□ 2.65
CNEP1R1-201ENST00000389134 NGDNQ8NEJ9 315 aaKnown RBP31.6■■■□□ 2.65
CNEP1R1-201ENST00000389134 WASLO00401 505 aaPredicted RBP31.59■■■□□ 2.65
CNEP1R1-201ENST00000389134 EZH2Q15910 746 aaKnown RBP31.59■■■□□ 2.65
CNEP1R1-201ENST00000389134 FAM196AQ6ZSG2 479 aa31.58■■■□□ 2.65
CNEP1R1-201ENST00000389134 SPATA31A1Q5TZJ5 1347 aa31.57■■■□□ 2.64
CNEP1R1-201ENST00000389134 ITSN1Q15811 1721 aa31.56■■■□□ 2.64
CNEP1R1-201ENST00000389134 CAMKK2Q96RR4 588 aa31.55■■■□□ 2.64
CNEP1R1-201ENST00000389134 TRIM37O94972 964 aa31.54■■■□□ 2.64
CNEP1R1-201ENST00000389134 PARD3Q8TEW0 1356 aa31.53■■■□□ 2.64
CNEP1R1-201ENST00000389134 KIAA0232Q92628 1395 aa31.52■■■□□ 2.64
CNEP1R1-201ENST00000389134 STRN4Q9NRL3 753 aa31.5■■■□□ 2.63
CNEP1R1-201ENST00000389134 PHRF1Q9P1Y6 1649 aaKnown RBP31.49■■■□□ 2.63
CNEP1R1-201ENST00000389134 APBA3O96018 575 aa31.49■■■□□ 2.63
CNEP1R1-201ENST00000389134 CHRNA2Q15822 529 aa31.48■■■□□ 2.63
CNEP1R1-201ENST00000389134 ATP7BP35670 1465 aa31.46■■■□□ 2.63
CNEP1R1-201ENST00000389134 RREB1Q92766 1687 aa31.45■■■□□ 2.63
CNEP1R1-201ENST00000389134 STAC3Q96MF2 364 aa31.45■■■□□ 2.63
CNEP1R1-201ENST00000389134 KDM2AQ9Y2K7 1162 aa31.45■■■□□ 2.63
CNEP1R1-201ENST00000389134 BARGINQ6ZT62 677 aa31.44■■■□□ 2.62
CNEP1R1-201ENST00000389134 NUDT16Q96DE0 195 aaKnown RBP31.44■■■□□ 2.62
CNEP1R1-201ENST00000389134 EVA1CP58658 441 aa31.43■■■□□ 2.62
CNEP1R1-201ENST00000389134 ZC3H6P61129 1189 aaKnown RBP31.43■■■□□ 2.62
CNEP1R1-201ENST00000389134 PDE3BQ13370 1112 aa31.43■■■□□ 2.62
CNEP1R1-201ENST00000389134 DCAF11Q8TEB1 546 aa31.43■■■□□ 2.62
CNEP1R1-201ENST00000389134 ARHGEF28Q8N1W1 1705 aaKnown RBP31.43■■■□□ 2.62
CNEP1R1-201ENST00000389134 USP35Q9P2H5 1018 aa31.42■■■□□ 2.62
CNEP1R1-201ENST00000389134 NUP188Q5SRE5 1749 aa31.41■■■□□ 2.62
CNEP1R1-201ENST00000389134 NBPF8Q3BBV2 869 aa31.4■■■□□ 2.62
CNEP1R1-201ENST00000389134 NBPF14Q5TI25 921 aa31.4■■■□□ 2.62
CNEP1R1-201ENST00000389134 SSH2Q76I76 1423 aa31.39■■■□□ 2.62
CNEP1R1-201ENST00000389134 NUTM2GQ5VZR2 741 aa31.37■■■□□ 2.61
CNEP1R1-201ENST00000389134 POLR3AO14802 1390 aaPredicted RBP31.35■■■□□ 2.61
CNEP1R1-201ENST00000389134 TCP11L2Q8N4U5 519 aa31.35■■■□□ 2.61
CNEP1R1-201ENST00000389134 CDK19Q9BWU1 502 aa31.34■■■□□ 2.61
CNEP1R1-201ENST00000389134 TOPAZ1Q8N9V7 1692 aa31.33■■■□□ 2.61
CNEP1R1-201ENST00000389134 CAMTA1Q9Y6Y1 1673 aa31.33■■■□□ 2.61
CNEP1R1-201ENST00000389134 YY1P25490 414 aa31.33■■■□□ 2.61
CNEP1R1-201ENST00000389134 RAB3GAP2Q9H2M9 1393 aa31.32■■■□□ 2.6
CNEP1R1-201ENST00000389134 ACEP12821 1306 aa31.32■■■□□ 2.6
CNEP1R1-201ENST00000389134 LARP1Q6PKG0 1096 aaKnown RBP31.32■■■□□ 2.6
CNEP1R1-201ENST00000389134 THRAP3Q9Y2W1 955 aaKnown RBP31.32■■■□□ 2.6
CNEP1R1-201ENST00000389134 CCDC61Q9Y6R9 512 aa31.32■■■□□ 2.6
CNEP1R1-201ENST00000389134 CPDO75976 1380 aa31.31■■■□□ 2.6
CNEP1R1-201ENST00000389134 NRKQ7Z2Y5 1582 aa31.31■■■□□ 2.6
CNEP1R1-201ENST00000389134 LMO7Q8WWI1 1683 aa31.3■■■□□ 2.6
CNEP1R1-201ENST00000389134 C11orf95C9JLR9 678 aaPredicted RBP31.3■■■□□ 2.6
CNEP1R1-201ENST00000389134 ABTB2Q8N961 1025 aa31.3■■■□□ 2.6
CNEP1R1-201ENST00000389134 PLEKHG3A1L390 1219 aa31.29■■■□□ 2.6
CNEP1R1-201ENST00000389134 SPON1Q9HCB6 807 aa31.29■■■□□ 2.6
CNEP1R1-201ENST00000389134 PARP4Q9UKK3 1724 aaKnown RBP31.29■■■□□ 2.6
CNEP1R1-201ENST00000389134 PPP1R1BQ9UD71 204 aaPredicted RBP31.27■■■□□ 2.6
CNEP1R1-201ENST00000389134 USP19O94966 1318 aa31.25■■■□□ 2.59
CNEP1R1-201ENST00000389134 DCAF8L1A6NGE4 600 aa31.25■■■□□ 2.59
CNEP1R1-201ENST00000389134 KCNQ2O43526 872 aa31.24■■■□□ 2.59
CNEP1R1-201ENST00000389134 SBF2Q86WG5 1849 aa31.24■■■□□ 2.59
CNEP1R1-201ENST00000389134 NLRP13Q86W25 1043 aa31.23■■■□□ 2.59
CNEP1R1-201ENST00000389134 RGPD3A6NKT7 1758 aaPredicted RBP31.22■■■□□ 2.59
CNEP1R1-201ENST00000389134 RGPD4Q7Z3J3 1758 aa31.22■■■□□ 2.59
CNEP1R1-201ENST00000389134 NINLQ9Y2I6 1382 aa31.21■■■□□ 2.59
CNEP1R1-201ENST00000389134 GCP02774 474 aa31.21■■■□□ 2.59
CNEP1R1-201ENST00000389134 COL5A2P05997 1499 aaPredicted RBP31.19■■■□□ 2.58
CNEP1R1-201ENST00000389134 KIAA1210Q9ULL0 1709 aa31.18■■■□□ 2.58
CNEP1R1-201ENST00000389134 OVOS2A0A0G2JMS6 1433 aa31.17■■■□□ 2.58
CNEP1R1-201ENST00000389134 OVOS2A0A0J9YW53 1432 aa31.17■■■□□ 2.58
CNEP1R1-201ENST00000389134 OVOS2Q6IE36 1432 aa31.17■■■□□ 2.58
CNEP1R1-201ENST00000389134 PEAK1Q9H792 1746 aa31.17■■■□□ 2.58
CNEP1R1-201ENST00000389134 CRB1P82279 1406 aa31.16■■■□□ 2.58
CNEP1R1-201ENST00000389134 PLSCR1O15162 318 aa31.15■■■□□ 2.58
CNEP1R1-201ENST00000389134 BRD4O60885 1362 aaPredicted RBP31.15■■■□□ 2.58
CNEP1R1-201ENST00000389134 PPIP5K1Q6PFW1 1433 aa31.11■■■□□ 2.57
CNEP1R1-201ENST00000389134 SRPK2P78362 688 aaKnown RBP31.1■■■□□ 2.57
CNEP1R1-201ENST00000389134 LRRC37A3O60309 1634 aa31.09■■■□□ 2.57
CNEP1R1-201ENST00000389134 DDB1Q16531 1140 aa31.09■■■□□ 2.57
CNEP1R1-201ENST00000389134 CASZ1Q86V15 1759 aa31.09■■■□□ 2.57
CNEP1R1-201ENST00000389134 AATKQ6ZMQ8 1374 aa31.08■■■□□ 2.57
CNEP1R1-201ENST00000389134 BCL11BQ9C0K0 894 aaPredicted RBP31.07■■■□□ 2.56
CNEP1R1-201ENST00000389134 ZBTB7CA1YPR0 619 aa31.06■■■□□ 2.56
CNEP1R1-201ENST00000389134 AKAP12Q02952 1782 aa31.06■■■□□ 2.56
CNEP1R1-201ENST00000389134 WNK3Q9BYP7 1800 aa31.05■■■□□ 2.56
CNEP1R1-201ENST00000389134 NLRP6P59044 892 aa31.05■■■□□ 2.56
CNEP1R1-201ENST00000389134 TOM1L2Q6ZVM7 507 aa31.04■■■□□ 2.56
CNEP1R1-201ENST00000389134 ANO8Q9HCE9 1232 aaPredicted RBP31.04■■■□□ 2.56
CNEP1R1-201ENST00000389134 COL18A1P39060 1754 aa31.03■■■□□ 2.56
CNEP1R1-201ENST00000389134 CABP2Q9NPB3 220 aa31.03■■■□□ 2.56
CNEP1R1-201ENST00000389134 SLIT3O75094 1523 aa31.03■■■□□ 2.56
CNEP1R1-201ENST00000389134 NBPF1Q3BBV0 1214 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms