RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 DYNC1I1O14576 645 aa14.75□□□□□ -0.05
SRGAP3-202ENST00000383836 XBP1P17861 261 aa14.74□□□□□ -0.05
SRGAP3-202ENST00000383836 G3BP1Q13283 466 aaKnown RBP eCLIP14.74□□□□□ -0.05
SRGAP3-202ENST00000383836 RIPK4P57078 832 aa14.74□□□□□ -0.05
SRGAP3-202ENST00000383836 FAM177A1Q8N128 213 aaPredicted RBP14.74□□□□□ -0.05
SRGAP3-202ENST00000383836 SEPT7Q16181 437 aaKnown RBP14.74□□□□□ -0.05
SRGAP3-202ENST00000383836 PRDM2Q13029 1718 aa14.74□□□□□ -0.05
SRGAP3-202ENST00000383836 MPNDQ8N594 471 aa14.74□□□□□ -0.05
SRGAP3-202ENST00000383836 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
SRGAP3-202ENST00000383836 BRPF1P55201 1214 aaPredicted RBP14.73□□□□□ -0.05
SRGAP3-202ENST00000383836 MSH5O43196 834 aa14.73□□□□□ -0.05
SRGAP3-202ENST00000383836 GBP3Q9H0R5 595 aa14.73□□□□□ -0.05
SRGAP3-202ENST00000383836 TIGD1Q96MW7 591 aa14.73□□□□□ -0.05
SRGAP3-202ENST00000383836 DACH1Q9UI36 760 aa14.73□□□□□ -0.05
SRGAP3-202ENST00000383836 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
SRGAP3-202ENST00000383836 NEFHP12036 1026 aa14.72□□□□□ -0.05
SRGAP3-202ENST00000383836 DNAJC2Q99543 621 aaKnown RBP14.72□□□□□ -0.05
SRGAP3-202ENST00000383836 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
SRGAP3-202ENST00000383836 RBM33Q96EV2 1170 aaKnown RBP14.72□□□□□ -0.05
SRGAP3-202ENST00000383836 PDZRN3Q9UPQ7 1066 aa14.72□□□□□ -0.05
SRGAP3-202ENST00000383836 CLASRPQ8N2M8 674 aaKnown RBP14.72□□□□□ -0.05
SRGAP3-202ENST00000383836 SCAPERQ9BY12 1400 aa14.72□□□□□ -0.05
SRGAP3-202ENST00000383836 KRT85P78386 507 aa14.71□□□□□ -0.05
SRGAP3-202ENST00000383836 ANKRD18AQ8IVF6 992 aa14.71□□□□□ -0.05
SRGAP3-202ENST00000383836 KIF18AQ8NI77 898 aa14.71□□□□□ -0.05
SRGAP3-202ENST00000383836 ZFYVE27Q5T4F4 411 aa14.71□□□□□ -0.05
SRGAP3-202ENST00000383836 PTPN14Q15678 1187 aa14.71□□□□□ -0.05
SRGAP3-202ENST00000383836 MAP9Q49MG5 647 aa14.71□□□□□ -0.05
SRGAP3-202ENST00000383836 CRACR2AQ9BSW2 395 aa14.71□□□□□ -0.05
SRGAP3-202ENST00000383836 EVC2Q86UK5 1308 aa14.71□□□□□ -0.06
SRGAP3-202ENST00000383836 JMYQ8N9B5 988 aa14.71□□□□□ -0.06
SRGAP3-202ENST00000383836 SYCE3A1L190 88 aa14.7□□□□□ -0.06
SRGAP3-202ENST00000383836 DHX16O60231 1041 aaKnown RBP14.7□□□□□ -0.06
SRGAP3-202ENST00000383836 TRIM34Q9BYJ4 488 aa14.7□□□□□ -0.06
SRGAP3-202ENST00000383836 PDE3AQ14432 1141 aa14.7□□□□□ -0.06
SRGAP3-202ENST00000383836 MCM3P25205 808 aa14.7□□□□□ -0.06
SRGAP3-202ENST00000383836 GGT6Q6P531 493 aa14.7□□□□□ -0.06
SRGAP3-202ENST00000383836 DHX37Q8IY37 1157 aaKnown RBP14.7□□□□□ -0.06
SRGAP3-202ENST00000383836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.7□□□□□ -0.06
SRGAP3-202ENST00000383836 GCC1Q96CN9 775 aa14.7□□□□□ -0.06
SRGAP3-202ENST00000383836 FKBP5Q13451 457 aaPredicted RBP14.69□□□□□ -0.06
SRGAP3-202ENST00000383836 MCM5P33992 734 aa14.69□□□□□ -0.06
SRGAP3-202ENST00000383836 NOL10Q9BSC4 688 aaKnown RBP14.69□□□□□ -0.06
SRGAP3-202ENST00000383836 HIP1O00291 1037 aa14.69□□□□□ -0.06
SRGAP3-202ENST00000383836 BBXQ8WY36 941 aaPredicted RBP14.69□□□□□ -0.06
SRGAP3-202ENST00000383836 TXLNAP40222 546 aa14.69□□□□□ -0.06
SRGAP3-202ENST00000383836 GNAI1P63096 354 aa14.69□□□□□ -0.06
SRGAP3-202ENST00000383836 TAX1BP1Q86VP1 789 aa14.69□□□□□ -0.06
SRGAP3-202ENST00000383836 STK38Q15208 465 aa14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 MICALCLQ6ZW33 695 aa14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 FILIP1Q7Z7B0 1213 aa14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 ANKRD1Q15327 319 aa14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 SLC26A8Q96RN1 970 aa14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 CCDC43Q96MW1 224 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 COG3Q96JB2 828 aa14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 LRRFIP2Q9Y608 721 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 DIAPH1O60610 1272 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 CEBPZQ03701 1054 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 C1orf141Q5JVX7 400 aa14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 NUP62CLQ9H1M0 184 aa14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 DDX58O95786 925 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 GTF2A1P52655 376 aaPredicted RBP14.68□□□□□ -0.06
SRGAP3-202ENST00000383836 XPCQ01831 940 aaPredicted RBP14.67□□□□□ -0.06
SRGAP3-202ENST00000383836 RSPH4AQ5TD94 716 aa14.67□□□□□ -0.06
SRGAP3-202ENST00000383836 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.67□□□□□ -0.06
SRGAP3-202ENST00000383836 CEP57L1Q8IYX8 460 aa14.67□□□□□ -0.06
SRGAP3-202ENST00000383836 CCDC148Q8NFR7 591 aa14.67□□□□□ -0.06
SRGAP3-202ENST00000383836 IPO4Q8TEX9 1081 aaKnown RBP14.67□□□□□ -0.06
SRGAP3-202ENST00000383836 TICAM2Q86XR7 235 aa14.67□□□□□ -0.06
SRGAP3-202ENST00000383836 ME1P48163 572 aa14.67□□□□□ -0.06
SRGAP3-202ENST00000383836 TRAK1Q9UPV9 953 aa14.66□□□□□ -0.06
SRGAP3-202ENST00000383836 IRX3P78415 501 aaPredicted RBP14.66□□□□□ -0.06
SRGAP3-202ENST00000383836 EZRP15311 586 aaKnown RBP14.66□□□□□ -0.06
SRGAP3-202ENST00000383836 CARMIL2Q6F5E8 1435 aa14.66□□□□□ -0.06
SRGAP3-202ENST00000383836 CFAP45Q9UL16 551 aa14.66□□□□□ -0.06
SRGAP3-202ENST00000383836 PDIA4P13667 645 aaKnown RBP14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 CASQ1P31415 396 aa14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 LTV1Q96GA3 475 aaPredicted RBP14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 SMTNL1A8MU46 457 aa14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 EIF2S2P20042 333 aaKnown RBP14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 GBP2P32456 591 aaPredicted RBP14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 NBPF1Q3BBV0 1214 aa14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 STIM1Q13586 685 aa14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 MAP3K11Q16584 847 aa14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 MIA2Q96PC5 1412 aa14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 GTF2F1P35269 517 aaKnown RBP eCLIP14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 TEFQ10587 303 aa14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 NGDNQ8NEJ9 315 aaKnown RBP14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 KIF21AQ7Z4S6 1674 aa14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 POLR3GO15318 223 aaPredicted RBP14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 TRERF1Q96PN7 1200 aa14.65□□□□□ -0.06
SRGAP3-202ENST00000383836 ZSCAN12O43309 604 aa14.64□□□□□ -0.07
SRGAP3-202ENST00000383836 UPF3BQ9BZI7 483 aaKnown RBP14.64□□□□□ -0.07
SRGAP3-202ENST00000383836 WASHC2AQ641Q2 1341 aa14.64□□□□□ -0.07
SRGAP3-202ENST00000383836 ANKRD62A6NC57 917 aa14.64□□□□□ -0.07
SRGAP3-202ENST00000383836 SYCP1Q15431 976 aa14.64□□□□□ -0.07
SRGAP3-202ENST00000383836 SPATA32Q96LK8 384 aa14.64□□□□□ -0.07
SRGAP3-202ENST00000383836 PRIMPOLQ96LW4 560 aa14.64□□□□□ -0.07
SRGAP3-202ENST00000383836 CYP46A1Q9Y6A2 500 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms