RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TRHP20396 242 aaPredicted RBP10.28□□□□□ -0.76
PTPRR-203ENST00000378778 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.28□□□□□ -0.76
PTPRR-203ENST00000378778 MTERF4Q7Z6M4 381 aaKnown RBP10.28□□□□□ -0.76
PTPRR-203ENST00000378778 VSIG10Q8N0Z9 540 aa10.28□□□□□ -0.76
PTPRR-203ENST00000378778 DMRT2Q9Y5R5 561 aa10.28□□□□□ -0.76
PTPRR-203ENST00000378778 QRICH2Q9H0J4 1663 aa10.27□□□□□ -0.76
PTPRR-203ENST00000378778 MORC1Q86VD1 984 aa10.27□□□□□ -0.76
PTPRR-203ENST00000378778 FTSJ3Q8IY81 847 aaKnown RBP10.27□□□□□ -0.76
PTPRR-203ENST00000378778 CARD14Q9BXL6 1004 aa10.27□□□□□ -0.76
PTPRR-203ENST00000378778 IPO8O15397 1037 aaKnown RBP10.27□□□□□ -0.77
PTPRR-203ENST00000378778 TRAPPC8Q9Y2L5 1435 aa10.26□□□□□ -0.77
PTPRR-203ENST00000378778 BRPF1P55201 1214 aaPredicted RBP10.26□□□□□ -0.77
PTPRR-203ENST00000378778 PANK2Q9BZ23 570 aa10.26□□□□□ -0.77
PTPRR-203ENST00000378778 NSD3Q9BZ95 1437 aa10.26□□□□□ -0.77
PTPRR-203ENST00000378778 RLBP1P12271 317 aa10.26□□□□□ -0.77
PTPRR-203ENST00000378778 ZSCAN30Q86W11 494 aa10.26□□□□□ -0.77
PTPRR-203ENST00000378778 EFCAB6Q5THR3 1501 aa10.25□□□□□ -0.77
PTPRR-203ENST00000378778 OFD1O75665 1012 aa10.25□□□□□ -0.77
PTPRR-203ENST00000378778 MCM5P33992 734 aa10.25□□□□□ -0.77
PTPRR-203ENST00000378778 BMP2KLQ5H9B9 411 aa10.25□□□□□ -0.77
PTPRR-203ENST00000378778 ANKRD26Q9UPS8 1709 aa10.25□□□□□ -0.77
PTPRR-203ENST00000378778 ADGRB3O60242 1522 aa10.25□□□□□ -0.77
PTPRR-203ENST00000378778 MED14O60244 1454 aa10.25□□□□□ -0.77
PTPRR-203ENST00000378778 ALDH1L2Q3SY69 923 aa10.25□□□□□ -0.77
PTPRR-203ENST00000378778 MFAP1P55081 439 aaKnown RBP10.24□□□□□ -0.77
PTPRR-203ENST00000378778 NUCB1Q02818 461 aa10.24□□□□□ -0.77
PTPRR-203ENST00000378778 KLHL40Q2TBA0 621 aa10.24□□□□□ -0.77
PTPRR-203ENST00000378778 TNPO1Q92973 898 aaKnown RBP10.24□□□□□ -0.77
PTPRR-203ENST00000378778 PPLO60437 1756 aa10.24□□□□□ -0.77
PTPRR-203ENST00000378778 HSP90AB1P08238 724 aaKnown RBP10.24□□□□□ -0.77
PTPRR-203ENST00000378778 NOS1P29475 1434 aa10.24□□□□□ -0.77
PTPRR-203ENST00000378778 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
PTPRR-203ENST00000378778 ATF7IPQ6VMQ6 1270 aa10.23□□□□□ -0.77
PTPRR-203ENST00000378778 GCC1Q96CN9 775 aa10.23□□□□□ -0.77
PTPRR-203ENST00000378778 ZMYND15Q9H091 742 aa10.23□□□□□ -0.77
PTPRR-203ENST00000378778 ATP7AQ04656 1500 aa10.23□□□□□ -0.77
PTPRR-203ENST00000378778 RPGRIP1LQ68CZ1 1315 aa10.23□□□□□ -0.77
PTPRR-203ENST00000378778 ZNF445P59923 1031 aa10.23□□□□□ -0.77
PTPRR-203ENST00000378778 CALD1Q05682 793 aaKnown RBP10.23□□□□□ -0.77
PTPRR-203ENST00000378778 PPIP5K1Q6PFW1 1433 aa10.23□□□□□ -0.77
PTPRR-203ENST00000378778 RIMBP3CA6NJZ7 1639 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 RIMBP3BA6NNM3 1639 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 ZCCHC11Q5TAX3 1644 aaKnown RBP10.22□□□□□ -0.77
PTPRR-203ENST00000378778 MROH1Q8NDA8 1641 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 RIMBP3Q9UFD9 1639 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 CSPP1Q1MSJ5 1256 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 HOMEZQ8IX15 550 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 GZF1Q9H116 711 aaPredicted RBP10.22□□□□□ -0.77
PTPRR-203ENST00000378778 K7ELQ4 463 aaPredicted RBP10.22□□□□□ -0.77
PTPRR-203ENST00000378778 NUCB2P80303 420 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 CYB5RLQ6IPT4 315 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 ZBTB40Q9NUA8 1239 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 ANKRD36BQ8N2N9 1353 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 CDC42BPGQ6DT37 1551 aa10.22□□□□□ -0.77
PTPRR-203ENST00000378778 KLHL34Q8N239 644 aa10.21□□□□□ -0.77
PTPRR-203ENST00000378778 MROH2AA6NES4 1674 aa10.21□□□□□ -0.77
PTPRR-203ENST00000378778 ADGRB1O14514 1584 aa10.21□□□□□ -0.77
PTPRR-203ENST00000378778 KIF24Q5T7B8 1368 aa10.21□□□□□ -0.77
PTPRR-203ENST00000378778 PIK3R4Q99570 1358 aa10.21□□□□□ -0.77
PTPRR-203ENST00000378778 ZNF500O60304 480 aaPredicted RBP10.21□□□□□ -0.78
PTPRR-203ENST00000378778 MSNP26038 577 aaKnown RBP10.21□□□□□ -0.78
PTPRR-203ENST00000378778 ABCA9Q8IUA7 1624 aa10.21□□□□□ -0.78
PTPRR-203ENST00000378778 NASPP49321 788 aaPredicted RBP10.2□□□□□ -0.78
PTPRR-203ENST00000378778 ARHGAP45Q92619 1136 aa10.2□□□□□ -0.78
PTPRR-203ENST00000378778 ASXL2Q76L83 1435 aa10.2□□□□□ -0.78
PTPRR-203ENST00000378778 CWC22Q9HCG8 908 aaKnown RBP10.2□□□□□ -0.78
PTPRR-203ENST00000378778 SMC4Q9NTJ3 1288 aa10.2□□□□□ -0.78
PTPRR-203ENST00000378778 ERBB4Q15303 1308 aa10.2□□□□□ -0.78
PTPRR-203ENST00000378778 TRIM27P14373 513 aa10.2□□□□□ -0.78
PTPRR-203ENST00000378778 CHD1LQ86WJ1 897 aa10.2□□□□□ -0.78
PTPRR-203ENST00000378778 COL3A1P02461 1466 aaPredicted RBP10.19□□□□□ -0.78
PTPRR-203ENST00000378778 RABEP1Q15276 862 aa10.19□□□□□ -0.78
PTPRR-203ENST00000378778 KIAA1211Q6ZU35 1233 aa10.19□□□□□ -0.78
PTPRR-203ENST00000378778 MTHFSP49914 203 aa10.18□□□□□ -0.78
PTPRR-203ENST00000378778 CFAP70Q5T0N1 1121 aa10.18□□□□□ -0.78
PTPRR-203ENST00000378778 PIAS4Q8N2W9 510 aaPredicted RBP10.18□□□□□ -0.78
PTPRR-203ENST00000378778 CNKSR2Q8WXI2 1034 aa10.18□□□□□ -0.78
PTPRR-203ENST00000378778 PDLIM2Q96JY6 352 aa10.18□□□□□ -0.78
PTPRR-203ENST00000378778 GAS2L3Q86XJ1 694 aa10.18□□□□□ -0.78
PTPRR-203ENST00000378778 ITPRIPQ8IWB1 547 aa10.18□□□□□ -0.78
PTPRR-203ENST00000378778 C14orf93Q9H972 538 aaKnown RBP10.18□□□□□ -0.78
PTPRR-203ENST00000378778 NOL7Q9UMY1 257 aaKnown RBP10.18□□□□□ -0.78
PTPRR-203ENST00000378778 FRMPD1Q5SYB0 1578 aa10.17□□□□□ -0.78
PTPRR-203ENST00000378778 CHD1O14646 1710 aa10.17□□□□□ -0.78
PTPRR-203ENST00000378778 ARHGEF28Q8N1W1 1705 aaKnown RBP10.17□□□□□ -0.78
PTPRR-203ENST00000378778 ZFYVE9O95405 1425 aa10.17□□□□□ -0.78
PTPRR-203ENST00000378778 PTCH1Q13635 1447 aa10.17□□□□□ -0.78
PTPRR-203ENST00000378778 KIF2CQ99661 725 aa10.17□□□□□ -0.78
PTPRR-203ENST00000378778 EVC2Q86UK5 1308 aa10.17□□□□□ -0.78
PTPRR-203ENST00000378778 DYNC1I1O14576 645 aa10.16□□□□□ -0.78
PTPRR-203ENST00000378778 CDC45O75419 566 aa10.16□□□□□ -0.78
PTPRR-203ENST00000378778 SPRYD3Q8NCJ5 442 aa10.16□□□□□ -0.78
PTPRR-203ENST00000378778 SSH1Q8WYL5 1049 aa10.16□□□□□ -0.78
PTPRR-203ENST00000378778 PLEKHF1Q96S99 279 aa10.16□□□□□ -0.78
PTPRR-203ENST00000378778 ADGRF5Q8IZF2 1346 aa10.16□□□□□ -0.78
PTPRR-203ENST00000378778 CLTCQ00610 1675 aaKnown RBP10.16□□□□□ -0.78
PTPRR-203ENST00000378778 BAG4O95429 457 aaKnown RBP10.16□□□□□ -0.78
PTPRR-203ENST00000378778 TMPOP42166 694 aaKnown RBP10.16□□□□□ -0.78
PTPRR-203ENST00000378778 TNNQ9UQP3 1299 aa10.16□□□□□ -0.78
PTPRR-203ENST00000378778 EXOSC9Q06265 439 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms