RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 CHD4Q14839 1912 aa26.62■■□□□ 1.85
H2AFX-201ENST00000375167 NRKQ7Z2Y5 1582 aa26.6■■□□□ 1.85
H2AFX-201ENST00000375167 TRPM3Q9HCF6 1732 aaPredicted RBP26.58■■□□□ 1.85
H2AFX-201ENST00000375167 SPATA31A1Q5TZJ5 1347 aa26.57■■□□□ 1.84
H2AFX-201ENST00000375167 ALS2Q96Q42 1657 aa26.57■■□□□ 1.84
H2AFX-201ENST00000375167 ITGAEP38570 1179 aa26.56■■□□□ 1.84
H2AFX-201ENST00000375167 PRDM11Q9NQV5 511 aa26.54■■□□□ 1.84
H2AFX-201ENST00000375167 MYOM1P52179 1685 aa26.53■■□□□ 1.84
H2AFX-201ENST00000375167 CASZ1Q86V15 1759 aa26.53■■□□□ 1.84
H2AFX-201ENST00000375167 PDE3BQ13370 1112 aa26.53■■□□□ 1.84
H2AFX-201ENST00000375167 CRYBG1Q9Y4K1 1723 aa26.52■■□□□ 1.84
H2AFX-201ENST00000375167 ADGRF5Q8IZF2 1346 aa26.52■■□□□ 1.84
H2AFX-201ENST00000375167 TMEM132EQ6IEE7 984 aa26.51■■□□□ 1.83
H2AFX-201ENST00000375167 YTHDC2Q9H6S0 1430 aaKnown RBP26.51■■□□□ 1.83
H2AFX-201ENST00000375167 PMFBP1Q8TBY8 1022 aa26.49■■□□□ 1.83
H2AFX-201ENST00000375167 RGPD3A6NKT7 1758 aaPredicted RBP26.49■■□□□ 1.83
H2AFX-201ENST00000375167 RGPD4Q7Z3J3 1758 aa26.49■■□□□ 1.83
H2AFX-201ENST00000375167 GPRASP1Q5JY77 1395 aa26.48■■□□□ 1.83
H2AFX-201ENST00000375167 UTRNP46939 3433 aa26.48■■□□□ 1.83
H2AFX-201ENST00000375167 ANKARQ7Z5J8 1434 aa26.47■■□□□ 1.83
H2AFX-201ENST00000375167 STRN4Q9NRL3 753 aa26.47■■□□□ 1.83
H2AFX-201ENST00000375167 SIRT1Q96EB6 747 aa26.46■■□□□ 1.83
H2AFX-201ENST00000375167 GIGYF1O75420 1035 aaPredicted RBP26.44■■□□□ 1.82
H2AFX-201ENST00000375167 USP35Q9P2H5 1018 aa26.44■■□□□ 1.82
H2AFX-201ENST00000375167 BARGINQ6ZT62 677 aa26.43■■□□□ 1.82
H2AFX-201ENST00000375167 ANKRD30BQ9BXX2 1392 aa26.42■■□□□ 1.82
H2AFX-201ENST00000375167 KIAA0232Q92628 1395 aa26.41■■□□□ 1.82
H2AFX-201ENST00000375167 ZBTB7AO95365 584 aa26.41■■□□□ 1.82
H2AFX-201ENST00000375167 PIK3C2GO75747 1445 aa26.41■■□□□ 1.82
H2AFX-201ENST00000375167 PTGER2P43116 358 aa26.39■■□□□ 1.82
H2AFX-201ENST00000375167 SYT17Q9BSW7 474 aa26.39■■□□□ 1.82
H2AFX-201ENST00000375167 FHDC1Q9C0D6 1143 aaPredicted RBP26.39■■□□□ 1.82
H2AFX-201ENST00000375167 ANO8Q9HCE9 1232 aaPredicted RBP26.39■■□□□ 1.82
H2AFX-201ENST00000375167 ACIN1Q9UKV3 1341 aaKnown RBP26.38■■□□□ 1.81
H2AFX-201ENST00000375167 DLC1Q96QB1 1528 aa26.38■■□□□ 1.81
H2AFX-201ENST00000375167 C11orf95C9JLR9 678 aaPredicted RBP26.38■■□□□ 1.81
H2AFX-201ENST00000375167 CHRNA2Q15822 529 aa26.38■■□□□ 1.81
H2AFX-201ENST00000375167 SSH2Q76I76 1423 aa26.38■■□□□ 1.81
H2AFX-201ENST00000375167 PHRF1Q9P1Y6 1649 aaKnown RBP26.37■■□□□ 1.81
H2AFX-201ENST00000375167 SAFB2Q14151 953 aaKnown RBP eCLIP26.36■■□□□ 1.81
H2AFX-201ENST00000375167 CEP350Q5VT06 3117 aa26.35■■□□□ 1.81
H2AFX-201ENST00000375167 PAK3O75914 559 aaPredicted RBP26.34■■□□□ 1.81
H2AFX-201ENST00000375167 EVA1CP58658 441 aa26.34■■□□□ 1.81
H2AFX-201ENST00000375167 PDGFDQ9GZP0 370 aaPredicted RBP26.34■■□□□ 1.81
H2AFX-201ENST00000375167 ATF5Q9Y2D1 282 aaPredicted RBP26.34■■□□□ 1.81
H2AFX-201ENST00000375167 PARP4Q9UKK3 1724 aaKnown RBP26.34■■□□□ 1.81
H2AFX-201ENST00000375167 PLSCR1O15162 318 aa26.33■■□□□ 1.81
H2AFX-201ENST00000375167 RGL3Q3MIN7 710 aa26.33■■□□□ 1.81
H2AFX-201ENST00000375167 TCP11L2Q8N4U5 519 aa26.33■■□□□ 1.8
H2AFX-201ENST00000375167 PRAM1Q96QH2 718 aa26.33■■□□□ 1.8
H2AFX-201ENST00000375167 BCL11BQ9C0K0 894 aaPredicted RBP26.33■■□□□ 1.8
H2AFX-201ENST00000375167 OVOS2A0A0G2JMS6 1433 aa26.32■■□□□ 1.8
H2AFX-201ENST00000375167 OVOS2A0A0J9YW53 1432 aa26.32■■□□□ 1.8
H2AFX-201ENST00000375167 OVOS2Q6IE36 1432 aa26.32■■□□□ 1.8
H2AFX-201ENST00000375167 EIF3AQ14152 1382 aaKnown RBP26.31■■□□□ 1.8
H2AFX-201ENST00000375167 DHX57Q6P158 1386 aaKnown RBP26.31■■□□□ 1.8
H2AFX-201ENST00000375167 SLC4A1APQ9BWU0 796 aaKnown RBP26.31■■□□□ 1.8
H2AFX-201ENST00000375167 SBF2Q86WG5 1849 aa26.3■■□□□ 1.8
H2AFX-201ENST00000375167 SPATA31E1Q6ZUB1 1445 aa26.29■■□□□ 1.8
H2AFX-201ENST00000375167 PEAK1Q9H792 1746 aa26.29■■□□□ 1.8
H2AFX-201ENST00000375167 ZC3H6P61129 1189 aaKnown RBP26.28■■□□□ 1.8
H2AFX-201ENST00000375167 NGDNQ8NEJ9 315 aaKnown RBP26.28■■□□□ 1.8
H2AFX-201ENST00000375167 POGKQ9P215 609 aa26.27■■□□□ 1.8
H2AFX-201ENST00000375167 THRAP3Q9Y2W1 955 aaKnown RBP26.27■■□□□ 1.8
H2AFX-201ENST00000375167 TULP4Q9NRJ4 1543 aa26.27■■□□□ 1.8
H2AFX-201ENST00000375167 LARP1Q6PKG0 1096 aaKnown RBP26.26■■□□□ 1.79
H2AFX-201ENST00000375167 MTFR1LQ9H019 292 aa26.25■■□□□ 1.79
H2AFX-201ENST00000375167 STK32BQ9NY57 414 aa26.24■■□□□ 1.79
H2AFX-201ENST00000375167 ATP7BP35670 1465 aa26.23■■□□□ 1.79
H2AFX-201ENST00000375167 C14orf93Q9H972 538 aaKnown RBP26.23■■□□□ 1.79
H2AFX-201ENST00000375167 MAP3K5Q99683 1374 aa26.23■■□□□ 1.79
H2AFX-201ENST00000375167 GPR162Q16538 588 aa26.22■■□□□ 1.79
H2AFX-201ENST00000375167 PRR36Q9H6K5 1346 aa26.22■■□□□ 1.79
H2AFX-201ENST00000375167 LMO7Q8WWI1 1683 aa26.21■■□□□ 1.79
H2AFX-201ENST00000375167 SGIP1Q9BQI5 828 aa26.2■■□□□ 1.78
H2AFX-201ENST00000375167 HIRIP3Q9BW71 556 aaPredicted RBP26.2■■□□□ 1.78
H2AFX-201ENST00000375167 ITSN1Q15811 1721 aa26.2■■□□□ 1.78
H2AFX-201ENST00000375167 SHANK3Q9BYB0 1731 aa26.2■■□□□ 1.78
H2AFX-201ENST00000375167 LRRC37A3O60309 1634 aa26.19■■□□□ 1.78
H2AFX-201ENST00000375167 ARXQ96QS3 562 aa26.19■■□□□ 1.78
H2AFX-201ENST00000375167 SLC15A2Q16348 729 aa26.17■■□□□ 1.78
H2AFX-201ENST00000375167 CFAP70Q5T0N1 1121 aa26.16■■□□□ 1.78
H2AFX-201ENST00000375167 PROM2Q8N271 834 aa26.16■■□□□ 1.78
H2AFX-201ENST00000375167 NUTM2GQ5VZR2 741 aa26.14■■□□□ 1.78
H2AFX-201ENST00000375167 CPDO75976 1380 aa26.14■■□□□ 1.77
H2AFX-201ENST00000375167 MINK1Q8N4C8 1332 aaPredicted RBP26.13■■□□□ 1.77
H2AFX-201ENST00000375167 COL5A2P05997 1499 aaPredicted RBP26.12■■□□□ 1.77
H2AFX-201ENST00000375167 PTF1AQ7RTS3 328 aa26.12■■□□□ 1.77
H2AFX-201ENST00000375167 CRB1P82279 1406 aa26.12■■□□□ 1.77
H2AFX-201ENST00000375167 WASLO00401 505 aaPredicted RBP26.11■■□□□ 1.77
H2AFX-201ENST00000375167 DDB1Q16531 1140 aa26.11■■□□□ 1.77
H2AFX-201ENST00000375167 TXNRD1Q16881 649 aa26.11■■□□□ 1.77
H2AFX-201ENST00000375167 AKAP12Q02952 1782 aa26.11■■□□□ 1.77
H2AFX-201ENST00000375167 PELP1Q8IZL8 1130 aaKnown RBP26.08■■□□□ 1.77
H2AFX-201ENST00000375167 BCL9O00512 1426 aa26.06■■□□□ 1.76
H2AFX-201ENST00000375167 WNK3Q9BYP7 1800 aa26.06■■□□□ 1.76
H2AFX-201ENST00000375167 AATKQ6ZMQ8 1374 aa26.05■■□□□ 1.76
H2AFX-201ENST00000375167 HSPA6P17066 643 aa26.04■■□□□ 1.76
H2AFX-201ENST00000375167 TRAK1Q9UPV9 953 aa26.04■■□□□ 1.76
H2AFX-201ENST00000375167 KLHL34Q8N239 644 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 1019 ms