RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 SMC2O95347 1197 aa10.79□□□□□ -0.68
CSMD2-205ENST00000373381 RSPH4AQ5TD94 716 aa10.79□□□□□ -0.68
CSMD2-205ENST00000373381 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
CSMD2-205ENST00000373381 ZWINTO95229 277 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 TRIM22Q8IYM9 498 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 RSPH6AQ9H0K4 717 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 GPRASP1Q5JY77 1395 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 CHMP4BP1P59074 171 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 NLRP13Q86W25 1043 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 SIN3AQ96ST3 1273 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 ZNF396Q96N95 335 aaPredicted RBP10.78□□□□□ -0.68
CSMD2-205ENST00000373381 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.78□□□□□ -0.68
CSMD2-205ENST00000373381 API5Q9BZZ5 524 aaKnown RBP10.78□□□□□ -0.68
CSMD2-205ENST00000373381 CFAP57Q96MR6 1250 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 CENPHQ9H3R5 247 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 FERP16591 822 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 DACH1Q9UI36 760 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 CCER2I3L3R5 266 aa10.78□□□□□ -0.68
CSMD2-205ENST00000373381 BRPF1P55201 1214 aaPredicted RBP10.78□□□□□ -0.68
CSMD2-205ENST00000373381 ZSCAN29Q8IWY8 852 aaPredicted RBP10.78□□□□□ -0.68
CSMD2-205ENST00000373381 CCDC158Q5M9N0 1113 aa10.77□□□□□ -0.68
CSMD2-205ENST00000373381 PPFIBP1Q86W92 1011 aa10.77□□□□□ -0.68
CSMD2-205ENST00000373381 RGS22Q8NE09 1264 aa10.77□□□□□ -0.69
CSMD2-205ENST00000373381 DDX19BQ9UMR2 479 aa10.77□□□□□ -0.69
CSMD2-205ENST00000373381 PDCP20941 246 aa10.77□□□□□ -0.69
CSMD2-205ENST00000373381 CNNM1Q9NRU3 951 aa10.77□□□□□ -0.69
CSMD2-205ENST00000373381 TRAK1Q9UPV9 953 aa10.77□□□□□ -0.69
CSMD2-205ENST00000373381 MPHOSPH6Q99547 160 aaKnown RBP10.77□□□□□ -0.69
CSMD2-205ENST00000373381 CCDC57Q2TAC2 916 aa10.76□□□□□ -0.69
CSMD2-205ENST00000373381 HOOK3Q86VS8 718 aa10.76□□□□□ -0.69
CSMD2-205ENST00000373381 CA8P35219 290 aa10.76□□□□□ -0.69
CSMD2-205ENST00000373381 NUCB2P80303 420 aa10.76□□□□□ -0.69
CSMD2-205ENST00000373381 TTC39AQ5SRH9 613 aa10.76□□□□□ -0.69
CSMD2-205ENST00000373381 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
CSMD2-205ENST00000373381 MPHOSPH8Q99549 860 aa10.76□□□□□ -0.69
CSMD2-205ENST00000373381 LRRC45Q96CN5 670 aa10.76□□□□□ -0.69
CSMD2-205ENST00000373381 GOLGA6L10A0A0M3HER8 536 aa10.76□□□□□ -0.69
CSMD2-205ENST00000373381 TSPYL4Q9UJ04 414 aa10.76□□□□□ -0.69
CSMD2-205ENST00000373381 AIMP1Q12904 312 aaKnown RBP10.76□□□□□ -0.69
CSMD2-205ENST00000373381 DZIP1LQ8IYY4 767 aaKnown RBP10.76□□□□□ -0.69
CSMD2-205ENST00000373381 HSPA5P11021 654 aaKnown RBP10.75□□□□□ -0.69
CSMD2-205ENST00000373381 CBX1P83916 185 aa10.75□□□□□ -0.69
CSMD2-205ENST00000373381 ELL2O00472 640 aaPredicted RBP10.75□□□□□ -0.69
CSMD2-205ENST00000373381 LETM1O95202 739 aaPredicted RBP10.75□□□□□ -0.69
CSMD2-205ENST00000373381 UBTFL1P0CB47 393 aaPredicted RBP10.75□□□□□ -0.69
CSMD2-205ENST00000373381 CRBNQ96SW2 442 aa10.75□□□□□ -0.69
CSMD2-205ENST00000373381 ZNF287Q9HBT7 754 aa10.75□□□□□ -0.69
CSMD2-205ENST00000373381 PSMD1Q99460 953 aa10.75□□□□□ -0.69
CSMD2-205ENST00000373381 FAM161AQ3B820 660 aa10.74□□□□□ -0.69
CSMD2-205ENST00000373381 NOL7Q9UMY1 257 aaKnown RBP10.74□□□□□ -0.69
CSMD2-205ENST00000373381 SEC63Q9UGP8 760 aaKnown RBP10.74□□□□□ -0.69
CSMD2-205ENST00000373381 FSD1Q9BTV5 496 aa10.74□□□□□ -0.69
CSMD2-205ENST00000373381 PIBF1Q8WXW3 757 aa10.74□□□□□ -0.69
CSMD2-205ENST00000373381 C16orf71Q8IYS4 520 aaPredicted RBP10.74□□□□□ -0.69
CSMD2-205ENST00000373381 CCDC69A6NI79 296 aa10.74□□□□□ -0.69
CSMD2-205ENST00000373381 ATP2B1P20020 1258 aa10.74□□□□□ -0.69
CSMD2-205ENST00000373381 RRP7AQ9Y3A4 280 aaKnown RBP10.74□□□□□ -0.69
CSMD2-205ENST00000373381 MIA2Q96PC5 1412 aa10.74□□□□□ -0.69
CSMD2-205ENST00000373381 CENPQQ7L2Z9 268 aaPredicted RBP10.74□□□□□ -0.69
CSMD2-205ENST00000373381 SLU7O95391 586 aaKnown RBP10.74□□□□□ -0.69
CSMD2-205ENST00000373381 CCDC66A2RUB6 948 aa10.73□□□□□ -0.69
CSMD2-205ENST00000373381 E9PSI1 815 aa10.73□□□□□ -0.69
CSMD2-205ENST00000373381 RBM42Q9BTD8 480 aaKnown RBP10.73□□□□□ -0.69
CSMD2-205ENST00000373381 FAM177BA6PVY3 158 aa10.73□□□□□ -0.69
CSMD2-205ENST00000373381 STRN4Q9NRL3 753 aa10.73□□□□□ -0.69
CSMD2-205ENST00000373381 KIF15Q9NS87 1388 aa10.73□□□□□ -0.69
CSMD2-205ENST00000373381 WDR78Q5VTH9 848 aa10.73□□□□□ -0.69
CSMD2-205ENST00000373381 BCCIPQ9P287 314 aaKnown RBP eCLIP10.73□□□□□ -0.69
CSMD2-205ENST00000373381 SETD5Q9C0A6 1442 aa10.73□□□□□ -0.69
CSMD2-205ENST00000373381 MTERF4Q7Z6M4 381 aaKnown RBP10.72□□□□□ -0.69
CSMD2-205ENST00000373381 ERLIN1O75477 346 aa10.72□□□□□ -0.69
CSMD2-205ENST00000373381 TRIM5Q9C035 493 aa10.72□□□□□ -0.69
CSMD2-205ENST00000373381 RFX1P22670 979 aa10.72□□□□□ -0.69
CSMD2-205ENST00000373381 CUL5Q93034 780 aa10.72□□□□□ -0.69
CSMD2-205ENST00000373381 ZNF397Q8NF99 534 aaPredicted RBP10.72□□□□□ -0.69
CSMD2-205ENST00000373381 VPS36Q86VN1 386 aa10.72□□□□□ -0.69
CSMD2-205ENST00000373381 EHMT1Q9H9B1 1298 aa10.72□□□□□ -0.69
CSMD2-205ENST00000373381 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.72□□□□□ -0.69
CSMD2-205ENST00000373381 SSBP05455 408 aaKnown RBP eCLIP10.71□□□□□ -0.69
CSMD2-205ENST00000373381 FERMT2Q96AC1 680 aa10.71□□□□□ -0.69
CSMD2-205ENST00000373381 ZMYND15Q9H091 742 aa10.71□□□□□ -0.69
CSMD2-205ENST00000373381 TSNARE1Q96NA8 513 aa10.71□□□□□ -0.69
CSMD2-205ENST00000373381 RAB3IL1Q8TBN0 382 aa10.71□□□□□ -0.69
CSMD2-205ENST00000373381 KDM4AO75164 1064 aa10.71□□□□□ -0.7
CSMD2-205ENST00000373381 CDKL5O76039 1030 aa10.71□□□□□ -0.7
CSMD2-205ENST00000373381 CCDC175P0C221 793 aa10.71□□□□□ -0.7
CSMD2-205ENST00000373381 FAM13BQ9NYF5 915 aa10.71□□□□□ -0.7
CSMD2-205ENST00000373381 DIAPH1O60610 1272 aaKnown RBP10.71□□□□□ -0.7
CSMD2-205ENST00000373381 SREK1Q8WXA9 508 aaKnown RBP10.71□□□□□ -0.7
CSMD2-205ENST00000373381 CCDC39Q9UFE4 941 aa10.7□□□□□ -0.7
CSMD2-205ENST00000373381 TAF4BQ92750 862 aa10.7□□□□□ -0.7
CSMD2-205ENST00000373381 DNAJC2Q99543 621 aaKnown RBP10.7□□□□□ -0.7
CSMD2-205ENST00000373381 SERPINC1P01008 464 aa10.7□□□□□ -0.7
CSMD2-205ENST00000373381 CCDC144AA2RUR9 1427 aa10.7□□□□□ -0.7
CSMD2-205ENST00000373381 ZSCAN25Q6NSZ9 544 aa10.7□□□□□ -0.7
CSMD2-205ENST00000373381 CCDC18Q5T9S5 1454 aa10.7□□□□□ -0.7
CSMD2-205ENST00000373381 UBAC1Q9BSL1 405 aa10.7□□□□□ -0.7
CSMD2-205ENST00000373381 GNAI1P63096 354 aa10.69□□□□□ -0.7
CSMD2-205ENST00000373381 MAP2K1Q02750 393 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-205ENST00000373381 FMN1Q68DA7 1419 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms