RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 KIF16BQ96L93 1317 aa11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 CCDC144AA2RUR9 1427 aa11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
HMGCLL1-204ENST00000370852 NUCB1Q02818 461 aa11.6□□□□□ -0.55
HMGCLL1-204ENST00000370852 HDAC1Q13547 482 aaPredicted RBP11.6□□□□□ -0.55
HMGCLL1-204ENST00000370852 TMEM57Q8N5G2 664 aa11.6□□□□□ -0.55
HMGCLL1-204ENST00000370852 C1orf115Q9H7X2 142 aa11.6□□□□□ -0.55
HMGCLL1-204ENST00000370852 KIF3AQ9Y496 699 aa11.6□□□□□ -0.55
HMGCLL1-204ENST00000370852 HNRNPMP52272 730 aaKnown RBP eCLIP11.6□□□□□ -0.55
HMGCLL1-204ENST00000370852 SHROOM2Q13796 1616 aa11.6□□□□□ -0.55
HMGCLL1-204ENST00000370852 NUP153P49790 1475 aaKnown RBP11.59□□□□□ -0.55
HMGCLL1-204ENST00000370852 GTF2F1P35269 517 aaKnown RBP eCLIP11.59□□□□□ -0.55
HMGCLL1-204ENST00000370852 NAA30Q147X3 362 aaPredicted RBP11.59□□□□□ -0.55
HMGCLL1-204ENST00000370852 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
HMGCLL1-204ENST00000370852 KCNJ4P48050 445 aa11.59□□□□□ -0.55
HMGCLL1-204ENST00000370852 ANKRD45Q5TZF3 282 aa11.59□□□□□ -0.55
HMGCLL1-204ENST00000370852 CHD1LQ86WJ1 897 aa11.59□□□□□ -0.55
HMGCLL1-204ENST00000370852 SMC4Q9NTJ3 1288 aa11.59□□□□□ -0.55
HMGCLL1-204ENST00000370852 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.55
HMGCLL1-204ENST00000370852 RIOK3O14730 519 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-204ENST00000370852 ZBTB9Q96C00 473 aa11.58□□□□□ -0.56
HMGCLL1-204ENST00000370852 USP25Q9UHP3 1055 aa11.58□□□□□ -0.56
HMGCLL1-204ENST00000370852 NOB1Q9ULX3 412 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-204ENST00000370852 HMGN5P82970 282 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-204ENST00000370852 PIBF1Q8WXW3 757 aa11.58□□□□□ -0.56
HMGCLL1-204ENST00000370852 SSH1Q8WYL5 1049 aa11.58□□□□□ -0.56
HMGCLL1-204ENST00000370852 ARHGAP31Q2M1Z3 1444 aa11.57□□□□□ -0.56
HMGCLL1-204ENST00000370852 EXOSC9Q06265 439 aaKnown RBP11.57□□□□□ -0.56
HMGCLL1-204ENST00000370852 GDPD2Q9HCC8 539 aa11.57□□□□□ -0.56
HMGCLL1-204ENST00000370852 C9orf84Q5VXU9 1444 aa11.57□□□□□ -0.56
HMGCLL1-204ENST00000370852 PRIMPOLQ96LW4 560 aa11.57□□□□□ -0.56
HMGCLL1-204ENST00000370852 TRERF1Q96PN7 1200 aa11.57□□□□□ -0.56
HMGCLL1-204ENST00000370852 ITSN2Q9NZM3 1697 aa11.56□□□□□ -0.56
HMGCLL1-204ENST00000370852 ZBTB40Q9NUA8 1239 aa11.56□□□□□ -0.56
HMGCLL1-204ENST00000370852 MYO5CQ9NQX4 1742 aa11.56□□□□□ -0.56
HMGCLL1-204ENST00000370852 GRIN2AQ12879 1464 aa11.56□□□□□ -0.56
HMGCLL1-204ENST00000370852 SMARCA5O60264 1052 aaPredicted RBP11.56□□□□□ -0.56
HMGCLL1-204ENST00000370852 GADD45BO75293 160 aaPredicted RBP11.56□□□□□ -0.56
HMGCLL1-204ENST00000370852 PYCARDQ9ULZ3 195 aa11.56□□□□□ -0.56
HMGCLL1-204ENST00000370852 PDS5BQ9NTI5 1447 aa11.55□□□□□ -0.56
HMGCLL1-204ENST00000370852 BMP2KLQ5H9B9 411 aa11.55□□□□□ -0.56
HMGCLL1-204ENST00000370852 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
HMGCLL1-204ENST00000370852 RUNDC1Q96C34 613 aa11.55□□□□□ -0.56
HMGCLL1-204ENST00000370852 MYOM1P52179 1685 aa11.55□□□□□ -0.56
HMGCLL1-204ENST00000370852 PTPRGP23470 1445 aa11.54□□□□□ -0.56
HMGCLL1-204ENST00000370852 SLFN14P0C7P3 912 aa11.54□□□□□ -0.56
HMGCLL1-204ENST00000370852 NUCB2P80303 420 aa11.54□□□□□ -0.56
HMGCLL1-204ENST00000370852 FKBP5Q13451 457 aaPredicted RBP11.54□□□□□ -0.56
HMGCLL1-204ENST00000370852 ANKRD7Q92527 254 aa11.54□□□□□ -0.56
HMGCLL1-204ENST00000370852 PHF23Q9BUL5 403 aaPredicted RBP11.54□□□□□ -0.56
HMGCLL1-204ENST00000370852 TSPY26PQ9H489 355 aa11.54□□□□□ -0.56
HMGCLL1-204ENST00000370852 ADCY5O95622 1261 aa11.54□□□□□ -0.56
HMGCLL1-204ENST00000370852 GSPT1P15170 499 aaKnown RBP11.54□□□□□ -0.56
HMGCLL1-204ENST00000370852 AP5Z1O43299 807 aa11.53□□□□□ -0.56
HMGCLL1-204ENST00000370852 CDK11BP21127 795 aaKnown RBP11.53□□□□□ -0.56
HMGCLL1-204ENST00000370852 PLCB2Q00722 1185 aa11.53□□□□□ -0.56
HMGCLL1-204ENST00000370852 IQGAP2Q13576 1575 aa11.53□□□□□ -0.56
HMGCLL1-204ENST00000370852 ATF7IPQ6VMQ6 1270 aa11.53□□□□□ -0.56
HMGCLL1-204ENST00000370852 DDX19BQ9UMR2 479 aa11.53□□□□□ -0.56
HMGCLL1-204ENST00000370852 ERICH4A6NGS2 130 aa11.52□□□□□ -0.56
HMGCLL1-204ENST00000370852 CAPN2P17655 700 aa11.52□□□□□ -0.56
HMGCLL1-204ENST00000370852 KCNF1Q9H3M0 494 aa11.52□□□□□ -0.56
HMGCLL1-204ENST00000370852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.57
HMGCLL1-204ENST00000370852 WDR63Q8IWG1 891 aa11.52□□□□□ -0.57
HMGCLL1-204ENST00000370852 C16orf71Q8IYS4 520 aaPredicted RBP11.52□□□□□ -0.57
HMGCLL1-204ENST00000370852 ZFP91Q96JP5 570 aaPredicted RBP11.52□□□□□ -0.57
HMGCLL1-204ENST00000370852 CDC42BPAQ5VT25 1732 aa11.52□□□□□ -0.57
HMGCLL1-204ENST00000370852 TSPY4P0CV99 314 aa11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 TSPY10P0CW01 314 aa11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 NCBP1Q09161 790 aaKnown RBP11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 NOL8Q76FK4 1167 aaKnown RBP11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 ST7Q9NRC1 585 aa11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 SHPRHQ149N8 1683 aa11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 LAMC1P11047 1609 aa11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 SYNMO15061 1565 aa11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 URB2Q14146 1524 aaKnown RBP11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 SPTLC3Q9NUV7 552 aa11.51□□□□□ -0.57
HMGCLL1-204ENST00000370852 SIRT2Q8IXJ6 389 aa11.5□□□□□ -0.57
HMGCLL1-204ENST00000370852 SPC24Q8NBT2 197 aa11.5□□□□□ -0.57
HMGCLL1-204ENST00000370852 TROQ12816 1431 aaPredicted RBP11.5□□□□□ -0.57
HMGCLL1-204ENST00000370852 CFAP74Q9C0B2 1584 aa11.5□□□□□ -0.57
HMGCLL1-204ENST00000370852 DTNBO60941 627 aa11.5□□□□□ -0.57
HMGCLL1-204ENST00000370852 AEBP1Q8IUX7 1158 aa11.5□□□□□ -0.57
HMGCLL1-204ENST00000370852 PPIP5K1Q6PFW1 1433 aa11.5□□□□□ -0.57
HMGCLL1-204ENST00000370852 HCLS1P14317 486 aaPredicted RBP11.49□□□□□ -0.57
HMGCLL1-204ENST00000370852 OTUD7AQ8TE49 926 aaPredicted RBP11.49□□□□□ -0.57
HMGCLL1-204ENST00000370852 CHMP4CQ96CF2 233 aa11.49□□□□□ -0.57
HMGCLL1-204ENST00000370852 USP26Q9BXU7 913 aa11.49□□□□□ -0.57
HMGCLL1-204ENST00000370852 CTNNA3Q9UI47 895 aa11.49□□□□□ -0.57
HMGCLL1-204ENST00000370852 CCDC141Q6ZP82 1450 aa11.49□□□□□ -0.57
HMGCLL1-204ENST00000370852 OGFRQ9NZT2 677 aa11.49□□□□□ -0.57
HMGCLL1-204ENST00000370852 ATAD2Q6PL18 1390 aa11.49□□□□□ -0.57
HMGCLL1-204ENST00000370852 MTHFSP49914 203 aa11.48□□□□□ -0.57
HMGCLL1-204ENST00000370852 RABEP1Q15276 862 aa11.48□□□□□ -0.57
HMGCLL1-204ENST00000370852 CDC45O75419 566 aa11.48□□□□□ -0.57
HMGCLL1-204ENST00000370852 CDCA8Q53HL2 280 aa11.48□□□□□ -0.57
HMGCLL1-204ENST00000370852 MORC1Q86VD1 984 aa11.48□□□□□ -0.57
HMGCLL1-204ENST00000370852 POLR3AO14802 1390 aaPredicted RBP11.48□□□□□ -0.57
HMGCLL1-204ENST00000370852 CTIFO43310 598 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms