RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NUCB2P80303 420 aa21.75■■□□□ 1.07
SNX27-202ENST00000368841 RBM10P98175 930 aaKnown RBP21.75■■□□□ 1.07
SNX27-202ENST00000368841 CCDC85AQ96PX6 553 aaPredicted RBP21.75■■□□□ 1.07
SNX27-202ENST00000368841 HSP90AB4PQ58FF6 505 aa21.75■■□□□ 1.07
SNX27-202ENST00000368841 NUP133Q8WUM0 1156 aa21.74■■□□□ 1.07
SNX27-202ENST00000368841 BICDL1Q6ZP65 573 aa21.74■■□□□ 1.07
SNX27-202ENST00000368841 FAM177A1Q8N128 213 aaPredicted RBP21.74■■□□□ 1.07
SNX27-202ENST00000368841 NFKBIBQ15653 356 aa21.74■■□□□ 1.07
SNX27-202ENST00000368841 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.74■■□□□ 1.07
SNX27-202ENST00000368841 NAT10Q9H0A0 1025 aaKnown RBP21.74■■□□□ 1.07
SNX27-202ENST00000368841 MAGEC2Q9UBF1 373 aaPredicted RBP21.74■■□□□ 1.07
SNX27-202ENST00000368841 XPCQ01831 940 aaPredicted RBP21.73■■□□□ 1.07
SNX27-202ENST00000368841 NEK4P51957 841 aa21.73■■□□□ 1.07
SNX27-202ENST00000368841 PSMA5P28066 241 aa21.73■■□□□ 1.07
SNX27-202ENST00000368841 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.72■■□□□ 1.07
SNX27-202ENST00000368841 ANKRD62A6NC57 917 aa21.72■■□□□ 1.07
SNX27-202ENST00000368841 ARGLU1Q9NWB6 273 aaPredicted RBP21.72■■□□□ 1.07
SNX27-202ENST00000368841 KIF7Q2M1P5 1343 aa21.71■■□□□ 1.07
SNX27-202ENST00000368841 PRKAR2BP31323 418 aa21.71■■□□□ 1.07
SNX27-202ENST00000368841 EXOSC9Q06265 439 aaKnown RBP21.71■■□□□ 1.07
SNX27-202ENST00000368841 SART3Q15020 963 aaKnown RBP21.71■■□□□ 1.07
SNX27-202ENST00000368841 WWC2Q6AWC2 1192 aa21.71■■□□□ 1.07
SNX27-202ENST00000368841 CCDC30Q5VVM6 783 aa21.71■■□□□ 1.07
SNX27-202ENST00000368841 HSP90B2PQ58FF3 399 aa21.71■■□□□ 1.07
SNX27-202ENST00000368841 TXNDC2Q86VQ3 553 aa21.71■■□□□ 1.07
SNX27-202ENST00000368841 TANGO6Q9C0B7 1094 aa21.71■■□□□ 1.07
SNX27-202ENST00000368841 SYCP1Q15431 976 aa21.7■■□□□ 1.06
SNX27-202ENST00000368841 SEPT11Q9NVA2 429 aaKnown RBP21.7■■□□□ 1.06
SNX27-202ENST00000368841 CCDC173Q0VFZ6 552 aa21.69■■□□□ 1.06
SNX27-202ENST00000368841 CHMP4BP1P59074 171 aa21.69■■□□□ 1.06
SNX27-202ENST00000368841 CLASRPQ8N2M8 674 aaKnown RBP21.69■■□□□ 1.06
SNX27-202ENST00000368841 FKBP4Q02790 459 aaKnown RBP eCLIP21.68■■□□□ 1.06
SNX27-202ENST00000368841 MATR3P43243 847 aaKnown RBP eCLIP21.68■■□□□ 1.062e-6■□□□□ 11.3
SNX27-202ENST00000368841 TSPY26PQ9H489 355 aa21.68■■□□□ 1.06
SNX27-202ENST00000368841 CCDC39Q9UFE4 941 aa21.68■■□□□ 1.06
SNX27-202ENST00000368841 NEFHP12036 1026 aa21.68■■□□□ 1.06
SNX27-202ENST00000368841 PDZRN3Q9UPQ7 1066 aa21.68■■□□□ 1.06
SNX27-202ENST00000368841 CALRP27797 417 aaKnown RBP21.68■■□□□ 1.06
SNX27-202ENST00000368841 CDR1P51861 262 aa21.68■■□□□ 1.06
SNX27-202ENST00000368841 CABP4P57796 275 aa21.68■■□□□ 1.06
SNX27-202ENST00000368841 KINO60870 393 aaKnown RBP21.67■■□□□ 1.06
SNX27-202ENST00000368841 BCAR3O75815 825 aa21.67■■□□□ 1.06
SNX27-202ENST00000368841 H0YHG0 523 aa21.67■■□□□ 1.06
SNX27-202ENST00000368841 SLC4A2P04920 1241 aa21.66■■□□□ 1.06
SNX27-202ENST00000368841 FAM193AP78312 1265 aa21.66■■□□□ 1.06
SNX27-202ENST00000368841 CCDC158Q5M9N0 1113 aa21.66■■□□□ 1.06
SNX27-202ENST00000368841 MIA2Q96PC5 1412 aa21.66■■□□□ 1.06
SNX27-202ENST00000368841 PRAM1Q96QH2 718 aa21.66■■□□□ 1.06
SNX27-202ENST00000368841 STK38Q15208 465 aa21.66■■□□□ 1.06
SNX27-202ENST00000368841 TOM1L2Q6ZVM7 507 aa21.66■■□□□ 1.06
SNX27-202ENST00000368841 ACBD3Q9H3P7 528 aa21.65■■□□□ 1.06
SNX27-202ENST00000368841 TRAK2O60296 914 aa21.65■■□□□ 1.06
SNX27-202ENST00000368841 AXDND1Q5T1B0 1012 aaPredicted RBP21.65■■□□□ 1.06
SNX27-202ENST00000368841 CNTLNQ9NXG0 1405 aa21.65■■□□□ 1.06
SNX27-202ENST00000368841 SERPINC1P01008 464 aa21.65■■□□□ 1.06
SNX27-202ENST00000368841 SLC3A2P08195 630 aaKnown RBP21.65■■□□□ 1.06
SNX27-202ENST00000368841 TWISTNBQ3B726 338 aaPredicted RBP21.65■■□□□ 1.06
SNX27-202ENST00000368841 TCP11L2Q8N4U5 519 aa21.65■■□□□ 1.06
SNX27-202ENST00000368841 PDCL3Q9H2J4 239 aa21.65■■□□□ 1.06
SNX27-202ENST00000368841 CCDC69A6NI79 296 aa21.64■■□□□ 1.06
SNX27-202ENST00000368841 CENPHQ9H3R5 247 aa21.64■■□□□ 1.06
SNX27-202ENST00000368841 ZSCAN29Q8IWY8 852 aaPredicted RBP21.64■■□□□ 1.05
SNX27-202ENST00000368841 DCAF8L1A6NGE4 600 aa21.64■■□□□ 1.05
SNX27-202ENST00000368841 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
SNX27-202ENST00000368841 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
SNX27-202ENST00000368841 SSBP05455 408 aaKnown RBP eCLIP21.63■■□□□ 1.05
SNX27-202ENST00000368841 PROSER2Q86WR7 435 aaPredicted RBP21.63■■□□□ 1.05
SNX27-202ENST00000368841 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
SNX27-202ENST00000368841 GPRASP1Q5JY77 1395 aa21.62■■□□□ 1.05
SNX27-202ENST00000368841 TXLNAP40222 546 aa21.62■■□□□ 1.05
SNX27-202ENST00000368841 FILIP1LQ4L180 1135 aa21.62■■□□□ 1.05
SNX27-202ENST00000368841 OSCARQ8IYS5 282 aa21.62■■□□□ 1.05
SNX27-202ENST00000368841 PLEKHO1Q53GL0 409 aaPredicted RBP21.61■■□□□ 1.05
SNX27-202ENST00000368841 BRPF3Q9ULD4 1205 aa21.61■■□□□ 1.05
SNX27-202ENST00000368841 SMARCE1Q969G3 411 aa21.61■■□□□ 1.05
SNX27-202ENST00000368841 ARHGAP5Q13017 1502 aa21.61■■□□□ 1.05
SNX27-202ENST00000368841 SULT6B1Q6IMI4 303 aa21.61■■□□□ 1.05
SNX27-202ENST00000368841 DEF6Q9H4E7 631 aa21.61■■□□□ 1.05
SNX27-202ENST00000368841 MPHOSPH10O00566 681 aaKnown RBP21.6■■□□□ 1.05
SNX27-202ENST00000368841 GNAI2P04899 355 aa21.6■■□□□ 1.05
SNX27-202ENST00000368841 RRS1Q15050 365 aaKnown RBP21.6■■□□□ 1.05
SNX27-202ENST00000368841 USP5P45974 858 aa21.6■■□□□ 1.05
SNX27-202ENST00000368841 TSPYL1Q9H0U9 437 aa21.6■■□□□ 1.05
SNX27-202ENST00000368841 SMG6Q86US8 1419 aaKnown RBP21.6■■□□□ 1.05
SNX27-202ENST00000368841 MIS18AQ9NYP9 233 aa21.59■■□□□ 1.05
SNX27-202ENST00000368841 ME1P48163 572 aa21.59■■□□□ 1.05
SNX27-202ENST00000368841 ENOX2Q16206 610 aaKnown RBP21.59■■□□□ 1.05
SNX27-202ENST00000368841 NOM1Q5C9Z4 860 aaKnown RBP21.59■■□□□ 1.05
SNX27-202ENST00000368841 SF3B2Q13435 895 aaKnown RBP21.59■■□□□ 1.05
SNX27-202ENST00000368841 TATP17735 454 aaPredicted RBP21.58■■□□□ 1.05
SNX27-202ENST00000368841 HDGFL1Q5TGJ6 251 aa21.58■■□□□ 1.05
SNX27-202ENST00000368841 CWC27Q6UX04 472 aaKnown RBP21.58■■□□□ 1.04
SNX27-202ENST00000368841 FANCD2Q9BXW9 1451 aa21.58■■□□□ 1.04
SNX27-202ENST00000368841 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
SNX27-202ENST00000368841 AACSQ86V21 672 aa21.57■■□□□ 1.04
SNX27-202ENST00000368841 ZNF396Q96N95 335 aaPredicted RBP21.57■■□□□ 1.04
SNX27-202ENST00000368841 TAX1BP1Q86VP1 789 aa21.57■■□□□ 1.04
SNX27-202ENST00000368841 CDK19Q9BWU1 502 aa21.57■■□□□ 1.04
SNX27-202ENST00000368841 GAS2L2Q8NHY3 880 aa21.57■■□□□ 1.04
SNX27-202ENST00000368841 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms