RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 SLC19A1P41440 591 aa5.47□□□□□ -1.53
RNU6-428P-201ENST00000362942 C14orf37Q86TY3 774 aa5.47□□□□□ -1.53
RNU6-428P-201ENST00000362942 HMX1Q9NP08 348 aaPredicted RBP5.47□□□□□ -1.53
RNU6-428P-201ENST00000362942 WNT7BP56706 349 aa5.46□□□□□ -1.54
RNU6-428P-201ENST00000362942 PTK2Q05397 1052 aa5.46□□□□□ -1.54
RNU6-428P-201ENST00000362942 TRIM32Q13049 653 aa5.46□□□□□ -1.54
RNU6-428P-201ENST00000362942 PDXDC2PQ6P474 469 aa5.46□□□□□ -1.54
RNU6-428P-201ENST00000362942 GJD4Q96KN9 370 aaPredicted RBP5.46□□□□□ -1.54
RNU6-428P-201ENST00000362942 GPSM3Q9Y4H4 160 aa5.46□□□□□ -1.54
RNU6-428P-201ENST00000362942 AGERQ15109 404 aa5.45□□□□□ -1.54
RNU6-428P-201ENST00000362942 WASHC4Q2M389 1173 aa5.45□□□□□ -1.54
RNU6-428P-201ENST00000362942 BPHLQ86WA6 291 aaPredicted RBP5.45□□□□□ -1.54
RNU6-428P-201ENST00000362942 TRIM34Q9BYJ4 488 aa5.45□□□□□ -1.54
RNU6-428P-201ENST00000362942 PRKD2Q9BZL6 878 aa5.45□□□□□ -1.54
RNU6-428P-201ENST00000362942 ABL2P42684 1182 aa5.44□□□□□ -1.54
RNU6-428P-201ENST00000362942 PTCRAQ6ISU1 281 aaPredicted RBP5.44□□□□□ -1.54
RNU6-428P-201ENST00000362942 ZNF598Q86UK7 904 aaKnown RBP5.44□□□□□ -1.54
RNU6-428P-201ENST00000362942 ZNF511Q8NB15 262 aa5.44□□□□□ -1.54
RNU6-428P-201ENST00000362942 BAP1Q92560 729 aa5.44□□□□□ -1.54
RNU6-428P-201ENST00000362942 A6NJR5 290 aa5.43□□□□□ -1.54
RNU6-428P-201ENST00000362942 MCCD1P59942 119 aaPredicted RBP5.43□□□□□ -1.54
RNU6-428P-201ENST00000362942 PLA2G2CQ5R387 149 aa5.43□□□□□ -1.54
RNU6-428P-201ENST00000362942 SPRYD7Q5W111 196 aa5.43□□□□□ -1.54
RNU6-428P-201ENST00000362942 LIAT1Q6ZQX7 453 aa5.43□□□□□ -1.54
RNU6-428P-201ENST00000362942 ZBTB33Q86T24 672 aa5.43□□□□□ -1.54
RNU6-428P-201ENST00000362942 ARHGAP9Q9BRR9 750 aa5.43□□□□□ -1.54
RNU6-428P-201ENST00000362942 GDPD2Q9HCC8 539 aa5.43□□□□□ -1.54
RNU6-428P-201ENST00000362942 TBC1D2BQ9UPU7 963 aa5.43□□□□□ -1.54
RNU6-428P-201ENST00000362942 COG6Q9Y2V7 657 aa5.43□□□□□ -1.54
RNU6-428P-201ENST00000362942 ZBBXA8MT70 800 aa5.42□□□□□ -1.54
RNU6-428P-201ENST00000362942 VARSP26640 1264 aaKnown RBP5.42□□□□□ -1.54
RNU6-428P-201ENST00000362942 LINC01559Q495D7 138 aa5.42□□□□□ -1.54
RNU6-428P-201ENST00000362942 ZNF697Q5TEC3 545 aa5.42□□□□□ -1.54
RNU6-428P-201ENST00000362942 EHBP1Q8NDI1 1231 aa5.42□□□□□ -1.54
RNU6-428P-201ENST00000362942 EPS8L1Q8TE68 723 aa5.42□□□□□ -1.54
RNU6-428P-201ENST00000362942 TRIM52Q96A61 297 aa5.42□□□□□ -1.54
RNU6-428P-201ENST00000362942 ZMYND15Q9H091 742 aa5.42□□□□□ -1.54
RNU6-428P-201ENST00000362942 SOX11P35716 441 aa5.41□□□□□ -1.54
RNU6-428P-201ENST00000362942 SH3BP2P78314 561 aa5.41□□□□□ -1.54
RNU6-428P-201ENST00000362942 EIF4G2P78344 907 aaKnown RBP eCLIP5.41□□□□□ -1.54
RNU6-428P-201ENST00000362942 NR1H3Q13133 447 aa5.41□□□□□ -1.54
RNU6-428P-201ENST00000362942 PROSER2Q86WR7 435 aaPredicted RBP5.41□□□□□ -1.54
RNU6-428P-201ENST00000362942 FAM174AQ8TBP5 190 aa5.41□□□□□ -1.54
RNU6-428P-201ENST00000362942 CDV3Q9UKY7 258 aaKnown RBP5.41□□□□□ -1.54
RNU6-428P-201ENST00000362942 MAGEB6P1A0A0J9YX57 407 aa5.4□□□□□ -1.54
RNU6-428P-201ENST00000362942 WNT7AO00755 349 aa5.4□□□□□ -1.54
RNU6-428P-201ENST00000362942 RC3H1Q5TC82 1133 aaKnown RBP5.4□□□□□ -1.54
RNU6-428P-201ENST00000362942 SH3BP5LQ7L8J4 393 aa5.4□□□□□ -1.54
RNU6-428P-201ENST00000362942 SH3RF1Q7Z6J0 888 aa5.39□□□□□ -1.55
RNU6-428P-201ENST00000362942 DZIP3Q86Y13 1208 aaKnown RBP5.39□□□□□ -1.55
RNU6-428P-201ENST00000362942 CLUAP1Q96AJ1 413 aa5.39□□□□□ -1.55
RNU6-428P-201ENST00000362942 SLC10A4Q96EP9 437 aa5.39□□□□□ -1.55
RNU6-428P-201ENST00000362942 POM121Q96HA1 1249 aa5.39□□□□□ -1.55
RNU6-428P-201ENST00000362942 SKOR1P84550 965 aa5.38□□□□□ -1.55
RNU6-428P-201ENST00000362942 NBPF20Q3BBV1 942 aa5.38□□□□□ -1.55
RNU6-428P-201ENST00000362942 CCDC125Q86Z20 511 aa5.38□□□□□ -1.55
RNU6-428P-201ENST00000362942 MPNDQ8N594 471 aa5.38□□□□□ -1.55
RNU6-428P-201ENST00000362942 FOXJ1Q92949 421 aa5.38□□□□□ -1.55
RNU6-428P-201ENST00000362942 CARD14Q9BXL6 1004 aa5.38□□□□□ -1.55
RNU6-428P-201ENST00000362942 FBXO45P0C2W1 286 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 PRR20EP86478 221 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 PRR20CP86479 221 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 PRR20DP86480 221 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 PRR20BP86481 221 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 PRR20AP86496 221 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 FOXC1Q12948 553 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 SEMA3FQ13275 785 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 ERFEQ4G0M1 354 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 TRMT44Q8IYL2 757 aaKnown RBP5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 CYP4X1Q8N118 509 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 ADAM32Q8TC27 787 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 EMID1Q96A84 441 aaPredicted RBP5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 C1QTNF2Q9BXJ5 285 aa5.37□□□□□ -1.55
RNU6-428P-201ENST00000362942 TTC24A2A3L6 582 aaPredicted RBP5.36□□□□□ -1.55
RNU6-428P-201ENST00000362942 TRAK2O60296 914 aa5.36□□□□□ -1.55
RNU6-428P-201ENST00000362942 VAC14Q08AM6 782 aa5.36□□□□□ -1.55
RNU6-428P-201ENST00000362942 IRF5Q13568 498 aa5.36□□□□□ -1.55
RNU6-428P-201ENST00000362942 LAPTM4AQ15012 233 aa5.36□□□□□ -1.55
RNU6-428P-201ENST00000362942 RNF20Q5VTR2 975 aa5.36□□□□□ -1.55
RNU6-428P-201ENST00000362942 SNIP1Q8TAD8 396 aaKnown RBP5.36□□□□□ -1.55
RNU6-428P-201ENST00000362942 MRGPRX2Q96LB1 330 aa5.36□□□□□ -1.55
RNU6-428P-201ENST00000362942 MAP4K5Q9Y4K4 846 aa5.36□□□□□ -1.55
RNU6-428P-201ENST00000362942 PCDHB9Q9Y5E1 797 aa5.36□□□□□ -1.55
RNU6-428P-201ENST00000362942 VASH1Q7L8A9 365 aaPredicted RBP5.35□□□□□ -1.55
RNU6-428P-201ENST00000362942 FNBP4Q8N3X1 1017 aaPredicted RBP5.35□□□□□ -1.55
RNU6-428P-201ENST00000362942 WASF2Q9Y6W5 498 aa5.35□□□□□ -1.55
RNU6-428P-201ENST00000362942 GDF9O60383 454 aa5.34□□□□□ -1.55
RNU6-428P-201ENST00000362942 GPR37L1O60883 481 aa5.34□□□□□ -1.55
RNU6-428P-201ENST00000362942 DHX9Q08211 1270 aaKnown RBP5.34□□□□□ -1.55
RNU6-428P-201ENST00000362942 NR5A1Q13285 461 aa5.34□□□□□ -1.55
RNU6-428P-201ENST00000362942 ARID5BQ14865 1188 aa5.34□□□□□ -1.55
RNU6-428P-201ENST00000362942 C4orf48Q5BLP8 95 aa5.34□□□□□ -1.55
RNU6-428P-201ENST00000362942 SEPT12Q8IYM1 358 aa5.34□□□□□ -1.55
RNU6-428P-201ENST00000362942 CDK15Q96Q40 435 aa5.34□□□□□ -1.55
RNU6-428P-201ENST00000362942 PDZRN3Q9UPQ7 1066 aa5.34□□□□□ -1.55
RNU6-428P-201ENST00000362942 SIAH2O43255 324 aa5.33□□□□□ -1.56
RNU6-428P-201ENST00000362942 ALDH1A1P00352 501 aa5.33□□□□□ -1.56
RNU6-428P-201ENST00000362942 SLFNL1Q499Z3 407 aa5.33□□□□□ -1.56
RNU6-428P-201ENST00000362942 PKD2L1Q9P0L9 805 aa5.33□□□□□ -1.56
RNU6-428P-201ENST00000362942 TIMELESSQ9UNS1 1208 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms