RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PTPRGP23470 1445 aa15.28■□□□□ 0.04
SMC4-202ENST00000357388 PDIA4P13667 645 aaKnown RBP15.28■□□□□ 0.04
SMC4-202ENST00000357388 SEPT7Q16181 437 aaKnown RBP15.28■□□□□ 0.04
SMC4-202ENST00000357388 ST20-MTHFSA0A0A6YYL1 179 aa15.27■□□□□ 0.04
SMC4-202ENST00000357388 PRPF40AO75400 957 aaKnown RBP15.27■□□□□ 0.04
SMC4-202ENST00000357388 CCDC181Q5TID7 509 aa15.27■□□□□ 0.04
SMC4-202ENST00000357388 TXLNAP40222 546 aa15.27■□□□□ 0.03
SMC4-202ENST00000357388 PPFIBP1Q86W92 1011 aa15.27■□□□□ 0.03
SMC4-202ENST00000357388 RUNDC1Q96C34 613 aa15.27■□□□□ 0.03
SMC4-202ENST00000357388 DHX57Q6P158 1386 aaKnown RBP15.27■□□□□ 0.03
SMC4-202ENST00000357388 NEFHP12036 1026 aa15.27■□□□□ 0.03
SMC4-202ENST00000357388 CCAR1Q8IX12 1150 aaKnown RBP15.27■□□□□ 0.03
SMC4-202ENST00000357388 CNTROBQ8N137 903 aa15.27■□□□□ 0.03
SMC4-202ENST00000357388 FBXO3Q9UK99 471 aa15.27■□□□□ 0.03
SMC4-202ENST00000357388 GNAI1P63096 354 aa15.27■□□□□ 0.03
SMC4-202ENST00000357388 APAF1O14727 1248 aa15.26■□□□□ 0.03
SMC4-202ENST00000357388 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
SMC4-202ENST00000357388 ZFYVE27Q5T4F4 411 aa15.26■□□□□ 0.03
SMC4-202ENST00000357388 RIC3Q7Z5B4 369 aa15.26■□□□□ 0.03
SMC4-202ENST00000357388 TTLL5Q6EMB2 1281 aa15.26■□□□□ 0.03
SMC4-202ENST00000357388 SAMD1Q6SPF0 538 aaPredicted RBP15.25■□□□□ 0.03
SMC4-202ENST00000357388 LRRCC1Q9C099 1032 aa15.25■□□□□ 0.03
SMC4-202ENST00000357388 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
SMC4-202ENST00000357388 LNPKQ9C0E8 428 aa15.25■□□□□ 0.03
SMC4-202ENST00000357388 USP47Q96K76 1375 aa15.25■□□□□ 0.03
SMC4-202ENST00000357388 WDR33Q9C0J8 1336 aaKnown RBP15.24■□□□□ 0.03
SMC4-202ENST00000357388 RIPK4P57078 832 aa15.24■□□□□ 0.03
SMC4-202ENST00000357388 SYCP1Q15431 976 aa15.24■□□□□ 0.03
SMC4-202ENST00000357388 ZSCAN30Q86W11 494 aa15.24■□□□□ 0.03
SMC4-202ENST00000357388 NLRP2Q9NX02 1062 aa15.24■□□□□ 0.03
SMC4-202ENST00000357388 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
SMC4-202ENST00000357388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.24■□□□□ 0.03
SMC4-202ENST00000357388 SF3B2Q13435 895 aaKnown RBP15.24■□□□□ 0.03
SMC4-202ENST00000357388 SART3Q15020 963 aaKnown RBP15.24■□□□□ 0.03
SMC4-202ENST00000357388 SERPINC1P01008 464 aa15.24■□□□□ 0.03
SMC4-202ENST00000357388 ENOX2Q16206 610 aaKnown RBP15.24■□□□□ 0.03
SMC4-202ENST00000357388 CCDC27Q2M243 656 aa15.24■□□□□ 0.03
SMC4-202ENST00000357388 MIA2Q96PC5 1412 aa15.24■□□□□ 0.03
SMC4-202ENST00000357388 IKQ13123 557 aaPredicted RBP15.23■□□□□ 0.03
SMC4-202ENST00000357388 MCM3P25205 808 aa15.23■□□□□ 0.03
SMC4-202ENST00000357388 DDX11Q96FC9 970 aa15.23■□□□□ 0.03
SMC4-202ENST00000357388 TBC1D2BQ9UPU7 963 aa15.23■□□□□ 0.03
SMC4-202ENST00000357388 WASHC4Q2M389 1173 aa15.23■□□□□ 0.03
SMC4-202ENST00000357388 SLC3A2P08195 630 aaKnown RBP15.23■□□□□ 0.03
SMC4-202ENST00000357388 NEUROD6Q96NK8 337 aa15.23■□□□□ 0.03
SMC4-202ENST00000357388 SLC26A8Q96RN1 970 aa15.23■□□□□ 0.03
SMC4-202ENST00000357388 TMCO3Q6UWJ1 677 aa15.22■□□□□ 0.03
SMC4-202ENST00000357388 FHOD3Q2V2M9 1422 aa15.22■□□□□ 0.03
SMC4-202ENST00000357388 HMGB2P26583 209 aaKnown RBP15.22■□□□□ 0.03
SMC4-202ENST00000357388 ANKRD1Q15327 319 aa15.22■□□□□ 0.03
SMC4-202ENST00000357388 TNMDQ9H2S6 317 aa15.22■□□□□ 0.03
SMC4-202ENST00000357388 STIM1Q13586 685 aa15.22■□□□□ 0.03
SMC4-202ENST00000357388 PAF1Q8N7H5 531 aa15.22■□□□□ 0.03
SMC4-202ENST00000357388 MICALCLQ6ZW33 695 aa15.21■□□□□ 0.03
SMC4-202ENST00000357388 SPC24Q8NBT2 197 aa15.21■□□□□ 0.03
SMC4-202ENST00000357388 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.03
SMC4-202ENST00000357388 STK38Q15208 465 aa15.21■□□□□ 0.03
SMC4-202ENST00000357388 SKIDA1Q1XH10 827 aa15.21■□□□□ 0.03
SMC4-202ENST00000357388 PDCL3Q9H2J4 239 aa15.21■□□□□ 0.03
SMC4-202ENST00000357388 UBXN4Q92575 508 aa15.21■□□□□ 0.03
SMC4-202ENST00000357388 NECTIN2Q92692 538 aa15.21■□□□□ 0.03
SMC4-202ENST00000357388 GCC1Q96CN9 775 aa15.21■□□□□ 0.03
SMC4-202ENST00000357388 TMEM132AQ24JP5 1023 aa15.2■□□□□ 0.02
SMC4-202ENST00000357388 CGNQ9P2M7 1197 aaKnown RBP15.2■□□□□ 0.02
SMC4-202ENST00000357388 MAP9Q49MG5 647 aa15.2■□□□□ 0.02
SMC4-202ENST00000357388 CCDC102AQ96A19 550 aa15.2■□□□□ 0.02
SMC4-202ENST00000357388 GPRASP1Q5JY77 1395 aa15.2■□□□□ 0.02
SMC4-202ENST00000357388 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMC4-202ENST00000357388 BRD4O60885 1362 aaPredicted RBP15.2■□□□□ 0.02
SMC4-202ENST00000357388 BCL11BQ9C0K0 894 aaPredicted RBP15.19■□□□□ 0.02
SMC4-202ENST00000357388 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
SMC4-202ENST00000357388 K7ELQ4 463 aaPredicted RBP15.19■□□□□ 0.02
SMC4-202ENST00000357388 KRT85P78386 507 aa15.19■□□□□ 0.02
SMC4-202ENST00000357388 NEK4P51957 841 aa15.19■□□□□ 0.02
SMC4-202ENST00000357388 CNTLNQ9NXG0 1405 aa15.19■□□□□ 0.02
SMC4-202ENST00000357388 SMTNL1A8MU46 457 aa15.18■□□□□ 0.02
SMC4-202ENST00000357388 GBP2P32456 591 aaPredicted RBP15.18■□□□□ 0.02
SMC4-202ENST00000357388 FOSBP53539 338 aa15.18■□□□□ 0.02
SMC4-202ENST00000357388 KIF6Q6ZMV9 814 aa15.18■□□□□ 0.02
SMC4-202ENST00000357388 CEP57L1Q8IYX8 460 aa15.18■□□□□ 0.02
SMC4-202ENST00000357388 CCDC148Q8NFR7 591 aa15.18■□□□□ 0.02
SMC4-202ENST00000357388 CDK5RAP3Q96JB5 506 aa15.18■□□□□ 0.02
SMC4-202ENST00000357388 FYB1O15117 783 aa15.18■□□□□ 0.02
SMC4-202ENST00000357388 CLASRPQ8N2M8 674 aaKnown RBP15.18■□□□□ 0.02
SMC4-202ENST00000357388 CENPHQ9H3R5 247 aa15.18■□□□□ 0.02
SMC4-202ENST00000357388 FILIP1Q7Z7B0 1213 aa15.18■□□□□ 0.02
SMC4-202ENST00000357388 ERICH4A6NGS2 130 aa15.17■□□□□ 0.02
SMC4-202ENST00000357388 FIBPO43427 364 aa15.17■□□□□ 0.02
SMC4-202ENST00000357388 UBTFL1P0CB47 393 aaPredicted RBP15.17■□□□□ 0.02
SMC4-202ENST00000357388 CRACR2AQ9BSW2 395 aa15.17■□□□□ 0.02
SMC4-202ENST00000357388 FAM69CQ0P6D2 419 aa15.17■□□□□ 0.02
SMC4-202ENST00000357388 GNL3LQ9NVN8 582 aaKnown RBP15.17■□□□□ 0.02
SMC4-202ENST00000357388 GNAI3P08754 354 aa15.17■□□□□ 0.02
SMC4-202ENST00000357388 ANKRD62A6NC57 917 aa15.16■□□□□ 0.02
SMC4-202ENST00000357388 PDE3AQ14432 1141 aa15.16■□□□□ 0.02
SMC4-202ENST00000357388 CCDC91Q7Z6B0 441 aa15.16■□□□□ 0.02
SMC4-202ENST00000357388 FMNL2Q96PY5 1086 aa15.16■□□□□ 0.02
SMC4-202ENST00000357388 ABCC8Q09428 1581 aa15.15■□□□□ 0.02
SMC4-202ENST00000357388 POTEB2H3BUK9 544 aa15.15■□□□□ 0.02
SMC4-202ENST00000357388 MCM4P33991 863 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms