RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 ERBB4Q15303 1308 aa21.5■■□□□ 1.03
CDK11B-201ENST00000340677 CARD11Q9BXL7 1154 aa21.5■■□□□ 1.03
CDK11B-201ENST00000340677 TMC1Q8TDI8 760 aa21.49■■□□□ 1.03
CDK11B-201ENST00000340677 DNAJC2Q99543 621 aaKnown RBP21.49■■□□□ 1.03
CDK11B-201ENST00000340677 GEMIN8Q9NWZ8 242 aaKnown RBP21.48■■□□□ 1.03
CDK11B-201ENST00000340677 POGKQ9P215 609 aa21.48■■□□□ 1.03
CDK11B-201ENST00000340677 CCDC7Q96M83 1385 aa21.47■■□□□ 1.03
CDK11B-201ENST00000340677 TMEM131LA2VDJ0 1609 aa21.47■■□□□ 1.03
CDK11B-201ENST00000340677 XRCC6P12956 609 aaKnown RBP eCLIP21.47■■□□□ 1.03
CDK11B-201ENST00000340677 SH3BP1Q9Y3L3 701 aa21.47■■□□□ 1.03
CDK11B-201ENST00000340677 IRF6O14896 467 aa21.46■■□□□ 1.03
CDK11B-201ENST00000340677 EP400NLQ6ZTU2 488 aa21.46■■□□□ 1.03
CDK11B-201ENST00000340677 SETBP1Q9Y6X0 1596 aa21.45■■□□□ 1.02
CDK11B-201ENST00000340677 YY1AP1Q9H869 796 aa21.45■■□□□ 1.02
CDK11B-201ENST00000340677 MYO5BQ9ULV0 1848 aa21.44■■□□□ 1.02
CDK11B-201ENST00000340677 NEXMIFQ5QGS0 1516 aa21.44■■□□□ 1.02
CDK11B-201ENST00000340677 ZFYVE9O95405 1425 aa21.44■■□□□ 1.02
CDK11B-201ENST00000340677 MPNDQ8N594 471 aa21.44■■□□□ 1.02
CDK11B-201ENST00000340677 KDM5AP29375 1690 aaKnown RBP21.43■■□□□ 1.02
CDK11B-201ENST00000340677 ZNF526Q8TF50 670 aaPredicted RBP21.43■■□□□ 1.02
CDK11B-201ENST00000340677 CCDC94Q9BW85 323 aaPredicted RBP21.43■■□□□ 1.02
CDK11B-201ENST00000340677 TERF1P54274 439 aa21.42■■□□□ 1.02
CDK11B-201ENST00000340677 CDCA8Q53HL2 280 aa21.42■■□□□ 1.02
CDK11B-201ENST00000340677 PANK2Q9BZ23 570 aa21.4■■□□□ 1.02
CDK11B-201ENST00000340677 PIK3C2GO75747 1445 aa21.39■■□□□ 1.02
CDK11B-201ENST00000340677 HNRNPUQ00839 825 aaKnown RBP eCLIP21.39■■□□□ 1.01
CDK11B-201ENST00000340677 NBPF1Q3BBV0 1214 aa21.39■■□□□ 1.01
CDK11B-201ENST00000340677 SCAF11Q99590 1463 aaKnown RBP21.39■■□□□ 1.01
CDK11B-201ENST00000340677 SEMA3FQ13275 785 aa21.38■■□□□ 1.01
CDK11B-201ENST00000340677 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
CDK11B-201ENST00000340677 IDI1Q13907 227 aa21.37■■□□□ 1.01
CDK11B-201ENST00000340677 ZMYM3Q14202 1370 aa21.36■■□□□ 1.01
CDK11B-201ENST00000340677 NBPF20Q3BBV1 942 aa21.36■■□□□ 1.01
CDK11B-201ENST00000340677 MYO3AQ8NEV4 1616 aa21.36■■□□□ 1.01
CDK11B-201ENST00000340677 GOLGA6L3A6NEY3 463 aa21.35■■□□□ 1.01
CDK11B-201ENST00000340677 TRIM44Q96DX7 344 aaPredicted RBP21.35■■□□□ 1.01
CDK11B-201ENST00000340677 FER1L4A9Z1Z3 1794 aa21.35■■□□□ 1.01
CDK11B-201ENST00000340677 ESF1Q9H501 851 aaKnown RBP21.35■■□□□ 1.01
CDK11B-201ENST00000340677 ST20-MTHFSA0A0A6YYL1 179 aa21.34■■□□□ 1.01
CDK11B-201ENST00000340677 ADGRF5Q8IZF2 1346 aa21.34■■□□□ 1.01
CDK11B-201ENST00000340677 SLC4A3P48751 1232 aa21.33■■□□□ 1.01
CDK11B-201ENST00000340677 ANAPC15P60006 121 aa21.33■■□□□ 1.01
CDK11B-201ENST00000340677 SETQ01105 290 aaPredicted RBP21.33■■□□□ 1.01
CDK11B-201ENST00000340677 PDE4AP27815 886 aa21.33■■□□□ 1
CDK11B-201ENST00000340677 CEP120Q8N960 986 aa21.33■■□□□ 1
CDK11B-201ENST00000340677 EIF3AQ14152 1382 aaKnown RBP21.33■■□□□ 1
CDK11B-201ENST00000340677 GPATCH11Q8N954 259 aa21.32■■□□□ 1
CDK11B-201ENST00000340677 LOC102724159A0A0B4J2E5 919 aa21.32■■□□□ 1
CDK11B-201ENST00000340677 CHGAP10645 457 aaKnown RBP21.32■■□□□ 1
CDK11B-201ENST00000340677 PWP2Q15269 919 aaKnown RBP21.32■■□□□ 1
CDK11B-201ENST00000340677 BANK1Q8NDB2 785 aa21.32■■□□□ 1
CDK11B-201ENST00000340677 FBXO31Q5XUX0 539 aaPredicted RBP21.31■■□□□ 1
CDK11B-201ENST00000340677 MLECQ14165 292 aa21.31■■□□□ 1
CDK11B-201ENST00000340677 ADGRB1O14514 1584 aa21.31■■□□□ 1
CDK11B-201ENST00000340677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.3■■□□□ 1
CDK11B-201ENST00000340677 KCNJ4P48050 445 aa21.3■■□□□ 1
CDK11B-201ENST00000340677 C3P01024 1663 aa21.29■■□□□ 1
CDK11B-201ENST00000340677 OFD1O75665 1012 aa21.29■■□□□ 1
CDK11B-201ENST00000340677 BACH2Q9BYV9 841 aa21.29■■□□□ 1
CDK11B-201ENST00000340677 C14orf93Q9H972 538 aaKnown RBP21.29■■□□□ 1
CDK11B-201ENST00000340677 A2ML1A8K2U0 1454 aa21.29■■□□□ 1
CDK11B-201ENST00000340677 FSD2A1L4K1 749 aa21.28■■□□□ 1
CDK11B-201ENST00000340677 TCERG1O14776 1098 aaKnown RBP21.28■■□□□ 1
CDK11B-201ENST00000340677 TESK2Q96S53 571 aa21.28■■□□□ 1
CDK11B-201ENST00000340677 CWC22Q9HCG8 908 aaKnown RBP21.27■■□□□ 1
CDK11B-201ENST00000340677 TNRQ92752 1358 aa21.26■□□□□ 0.99
CDK11B-201ENST00000340677 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
CDK11B-201ENST00000340677 SBNO2Q9Y2G9 1366 aa21.25■□□□□ 0.99
CDK11B-201ENST00000340677 CFAP70Q5T0N1 1121 aa21.25■□□□□ 0.99
CDK11B-201ENST00000340677 UBR1Q8IWV7 1749 aa21.25■□□□□ 0.99
CDK11B-201ENST00000340677 LMOD3Q0VAK6 560 aa21.24■□□□□ 0.99
CDK11B-201ENST00000340677 HSP90AB3PQ58FF7 597 aa21.23■□□□□ 0.99
CDK11B-201ENST00000340677 TRIM6-TRIM34B2RNG4 842 aa21.23■□□□□ 0.99
CDK11B-201ENST00000340677 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.23■□□□□ 0.99
CDK11B-201ENST00000340677 TRIM34Q9BYJ4 488 aa21.23■□□□□ 0.99
CDK11B-201ENST00000340677 STK26Q9P289 416 aa21.23■□□□□ 0.99
CDK11B-201ENST00000340677 ZNF692Q9BU19 519 aaPredicted RBP21.22■□□□□ 0.99
CDK11B-201ENST00000340677 PLCB2Q00722 1185 aa21.22■□□□□ 0.99
CDK11B-201ENST00000340677 TMF1P82094 1093 aa21.21■□□□□ 0.99
CDK11B-201ENST00000340677 ARHGEF28Q8N1W1 1705 aaKnown RBP21.2■□□□□ 0.98
CDK11B-201ENST00000340677 CBX1P83916 185 aa21.2■□□□□ 0.98
CDK11B-201ENST00000340677 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
CDK11B-201ENST00000340677 UQCRHLA0A096LP55 91 aa21.19■□□□□ 0.98
CDK11B-201ENST00000340677 ZNF500O60304 480 aaPredicted RBP21.19■□□□□ 0.98
CDK11B-201ENST00000340677 UQCRHP07919 91 aa21.19■□□□□ 0.98
CDK11B-201ENST00000340677 ADAMTSL3P82987 1691 aa21.19■□□□□ 0.98
CDK11B-201ENST00000340677 RIMS2Q9UQ26 1411 aa21.19■□□□□ 0.98
CDK11B-201ENST00000340677 SETD1AO15047 1707 aaKnown RBP21.19■□□□□ 0.98
CDK11B-201ENST00000340677 DYNC1I1O14576 645 aa21.19■□□□□ 0.98
CDK11B-201ENST00000340677 QRICH2Q9H0J4 1663 aa21.18■□□□□ 0.98
CDK11B-201ENST00000340677 STAG3Q9UJ98 1225 aa21.18■□□□□ 0.98
CDK11B-201ENST00000340677 DISP3Q9P2K9 1392 aa21.17■□□□□ 0.98
CDK11B-201ENST00000340677 NBPF11Q86T75 865 aa21.17■□□□□ 0.98
CDK11B-201ENST00000340677 ALKQ9UM73 1620 aa21.17■□□□□ 0.98
CDK11B-201ENST00000340677 ASXL1Q8IXJ9 1541 aa21.17■□□□□ 0.98
CDK11B-201ENST00000340677 CT47A1Q5JQC4 288 aaPredicted RBP21.17■□□□□ 0.98
CDK11B-201ENST00000340677 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.17■□□□□ 0.98
CDK11B-201ENST00000340677 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
CDK11B-201ENST00000340677 CC2D2BQ6DHV5 1058 aa21.16■□□□□ 0.98
CDK11B-201ENST00000340677 R3HCC1Q9Y3T6 440 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms