RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CDC45O75419 566 aa13.92□□□□□ -0.18
COL4A5-201ENST00000328300 TRDNQ13061 729 aa13.92□□□□□ -0.18
COL4A5-201ENST00000328300 SPRYD3Q8NCJ5 442 aa13.92□□□□□ -0.18
COL4A5-201ENST00000328300 NOS1P29475 1434 aa13.92□□□□□ -0.18
COL4A5-201ENST00000328300 FAM184AQ8NB25 1140 aa13.92□□□□□ -0.18
COL4A5-201ENST00000328300 TSHZ2Q9NRE2 1034 aa13.92□□□□□ -0.18
COL4A5-201ENST00000328300 RALGAPBQ86X10 1494 aa13.92□□□□□ -0.18
COL4A5-201ENST00000328300 SLC26A8Q96RN1 970 aa13.92□□□□□ -0.18
COL4A5-201ENST00000328300 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
COL4A5-201ENST00000328300 WASLO00401 505 aaPredicted RBP13.91□□□□□ -0.18
COL4A5-201ENST00000328300 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
COL4A5-201ENST00000328300 SLKQ9H2G2 1235 aaPredicted RBP13.91□□□□□ -0.18
COL4A5-201ENST00000328300 UHRF1BP1LA0JNW5 1464 aa13.91□□□□□ -0.18
COL4A5-201ENST00000328300 H3BQV1 296 aa13.91□□□□□ -0.18
COL4A5-201ENST00000328300 NFE2L2Q16236 605 aa13.91□□□□□ -0.18
COL4A5-201ENST00000328300 IFFO2Q5TF58 517 aa13.91□□□□□ -0.18
COL4A5-201ENST00000328300 ZNF530Q6P9A1 599 aaPredicted RBP13.91□□□□□ -0.18
COL4A5-201ENST00000328300 TTC21BQ7Z4L5 1316 aa13.9□□□□□ -0.18
COL4A5-201ENST00000328300 AMOTQ4VCS5 1084 aa13.9□□□□□ -0.18
COL4A5-201ENST00000328300 NUTM2GQ5VZR2 741 aa13.9□□□□□ -0.18
COL4A5-201ENST00000328300 IDI1Q13907 227 aa13.9□□□□□ -0.18
COL4A5-201ENST00000328300 TRIM34Q9BYJ4 488 aa13.9□□□□□ -0.18
COL4A5-201ENST00000328300 ANKRD36BQ8N2N9 1353 aa13.9□□□□□ -0.18
COL4A5-201ENST00000328300 EXOSC9Q06265 439 aaKnown RBP13.9□□□□□ -0.18
COL4A5-201ENST00000328300 CLASRPQ8N2M8 674 aaKnown RBP13.89□□□□□ -0.19
COL4A5-201ENST00000328300 RBM33Q96EV2 1170 aaKnown RBP13.89□□□□□ -0.19
COL4A5-201ENST00000328300 ARHGEF12Q9NZN5 1544 aa13.89□□□□□ -0.19
COL4A5-201ENST00000328300 GNAI2P04899 355 aa13.89□□□□□ -0.19
COL4A5-201ENST00000328300 CABP4P57796 275 aa13.89□□□□□ -0.19
COL4A5-201ENST00000328300 CNTROBQ8N137 903 aa13.89□□□□□ -0.19
COL4A5-201ENST00000328300 SF3A1Q15459 793 aaKnown RBP13.89□□□□□ -0.19
COL4A5-201ENST00000328300 GOLGA6L3A6NEY3 463 aa13.88□□□□□ -0.19
COL4A5-201ENST00000328300 TRIM29Q14134 588 aa13.88□□□□□ -0.19
COL4A5-201ENST00000328300 MSH5O43196 834 aa13.88□□□□□ -0.19
COL4A5-201ENST00000328300 PRDM11Q9NQV5 511 aa13.88□□□□□ -0.19
COL4A5-201ENST00000328300 TOM1L2Q6ZVM7 507 aa13.88□□□□□ -0.19
COL4A5-201ENST00000328300 PSMA5P28066 241 aa13.87□□□□□ -0.19
COL4A5-201ENST00000328300 HDGFL1Q5TGJ6 251 aa13.87□□□□□ -0.19
COL4A5-201ENST00000328300 FANCIQ9NVI1 1328 aa13.87□□□□□ -0.19
COL4A5-201ENST00000328300 RASSF8Q8NHQ8 419 aa13.87□□□□□ -0.19
COL4A5-201ENST00000328300 ERICH2A1L162 156 aa13.87□□□□□ -0.19
COL4A5-201ENST00000328300 PHF8Q9UPP1 1060 aa13.87□□□□□ -0.19
COL4A5-201ENST00000328300 ADGRF5Q8IZF2 1346 aa13.87□□□□□ -0.19
COL4A5-201ENST00000328300 ADGRL2O95490 1459 aa13.87□□□□□ -0.19
COL4A5-201ENST00000328300 ANO2Q9NQ90 1003 aa13.86□□□□□ -0.19
COL4A5-201ENST00000328300 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.86□□□□□ -0.19
COL4A5-201ENST00000328300 SAMD9Q5K651 1589 aa13.86□□□□□ -0.19
COL4A5-201ENST00000328300 AMOTL2Q9Y2J4 779 aa13.86□□□□□ -0.19
COL4A5-201ENST00000328300 DISP1Q96F81 1524 aa13.86□□□□□ -0.19
COL4A5-201ENST00000328300 MCM2P49736 904 aa13.86□□□□□ -0.19
COL4A5-201ENST00000328300 NUCB2P80303 420 aa13.86□□□□□ -0.19
COL4A5-201ENST00000328300 SRCIN1Q9C0H9 1055 aa13.86□□□□□ -0.19
COL4A5-201ENST00000328300 TTC21AQ8NDW8 1320 aa13.86□□□□□ -0.19
COL4A5-201ENST00000328300 IFT57Q9NWB7 429 aa13.86□□□□□ -0.19
COL4A5-201ENST00000328300 TBC1D2BQ9UPU7 963 aa13.86□□□□□ -0.19
COL4A5-201ENST00000328300 DNMT1P26358 1616 aaKnown RBP13.86□□□□□ -0.19
COL4A5-201ENST00000328300 GNAT3A8MTJ3 354 aa13.85□□□□□ -0.19
COL4A5-201ENST00000328300 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
COL4A5-201ENST00000328300 ALDH1L2Q3SY69 923 aa13.85□□□□□ -0.19
COL4A5-201ENST00000328300 MARCH6O60337 910 aa13.85□□□□□ -0.19
COL4A5-201ENST00000328300 CFAP74Q9C0B2 1584 aa13.84□□□□□ -0.19
COL4A5-201ENST00000328300 CPLX1O14810 134 aa13.84□□□□□ -0.19
COL4A5-201ENST00000328300 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
COL4A5-201ENST00000328300 ATF7IPQ6VMQ6 1270 aa13.84□□□□□ -0.19
COL4A5-201ENST00000328300 CHMP5Q9NZZ3 219 aa13.84□□□□□ -0.19
COL4A5-201ENST00000328300 PANK1Q8TE04 598 aa13.84□□□□□ -0.19
COL4A5-201ENST00000328300 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
COL4A5-201ENST00000328300 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
COL4A5-201ENST00000328300 AIMP1Q12904 312 aaKnown RBP13.83□□□□□ -0.2
COL4A5-201ENST00000328300 RPAP2Q8IXW5 612 aaPredicted RBP13.83□□□□□ -0.2
COL4A5-201ENST00000328300 NEO1Q92859 1461 aa13.82□□□□□ -0.2
COL4A5-201ENST00000328300 TULP1O00294 542 aaPredicted RBP13.82□□□□□ -0.2
COL4A5-201ENST00000328300 SLC4A2P04920 1241 aa13.82□□□□□ -0.2
COL4A5-201ENST00000328300 TMPOP42166 694 aaKnown RBP13.82□□□□□ -0.2
COL4A5-201ENST00000328300 RALYLQ86SE5 291 aaKnown RBP13.82□□□□□ -0.2
COL4A5-201ENST00000328300 MVPQ14764 893 aaKnown RBP13.82□□□□□ -0.2
COL4A5-201ENST00000328300 RIMS2Q9UQ26 1411 aa13.81□□□□□ -0.2
COL4A5-201ENST00000328300 TRAPPC8Q9Y2L5 1435 aa13.81□□□□□ -0.2
COL4A5-201ENST00000328300 APPP05067 770 aa13.81□□□□□ -0.2
COL4A5-201ENST00000328300 CADPS2Q86UW7 1296 aa13.81□□□□□ -0.2
COL4A5-201ENST00000328300 STRN4Q9NRL3 753 aa13.81□□□□□ -0.2
COL4A5-201ENST00000328300 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
COL4A5-201ENST00000328300 SLFN5Q08AF3 891 aa13.81□□□□□ -0.2
COL4A5-201ENST00000328300 IL16Q14005 1332 aa13.81□□□□□ -0.2
COL4A5-201ENST00000328300 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
COL4A5-201ENST00000328300 NOB1Q9ULX3 412 aaKnown RBP13.81□□□□□ -0.2
COL4A5-201ENST00000328300 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
COL4A5-201ENST00000328300 SURF6O75683 361 aaKnown RBP13.81□□□□□ -0.2
COL4A5-201ENST00000328300 FBXO31Q5XUX0 539 aaPredicted RBP13.81□□□□□ -0.2
COL4A5-201ENST00000328300 ZSCAN25Q6NSZ9 544 aa13.81□□□□□ -0.2
COL4A5-201ENST00000328300 CLSTN1O94985 981 aa13.8□□□□□ -0.2
COL4A5-201ENST00000328300 TPM2P07951 284 aa13.8□□□□□ -0.2
COL4A5-201ENST00000328300 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL4A5-201ENST00000328300 SLC3A2P08195 630 aaKnown RBP13.8□□□□□ -0.2
COL4A5-201ENST00000328300 RBM42Q9BTD8 480 aaKnown RBP13.8□□□□□ -0.2
COL4A5-201ENST00000328300 C22orf23Q9BZE7 217 aa13.8□□□□□ -0.2
COL4A5-201ENST00000328300 LNPKQ9C0E8 428 aa13.8□□□□□ -0.2
COL4A5-201ENST00000328300 CTDP1Q9Y5B0 961 aaPredicted RBP13.8□□□□□ -0.2
COL4A5-201ENST00000328300 CCDC158Q5M9N0 1113 aa13.8□□□□□ -0.2
COL4A5-201ENST00000328300 NEUROD6Q96NK8 337 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms