RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 SPDYE4A6NLX3 237 aa9.82□□□□□ -0.84
RTL3-201ENST00000321110 CYP2E1P05181 493 aaPredicted RBP9.82□□□□□ -0.84
RTL3-201ENST00000321110 DZIP1LQ8IYY4 767 aaKnown RBP9.82□□□□□ -0.84
RTL3-201ENST00000321110 ZBTB22O15209 634 aa9.82□□□□□ -0.84
RTL3-201ENST00000321110 TSPY4P0CV99 314 aa9.82□□□□□ -0.84
RTL3-201ENST00000321110 TSPY10P0CW01 314 aa9.82□□□□□ -0.84
RTL3-201ENST00000321110 LRSAM1Q6UWE0 723 aa9.82□□□□□ -0.84
RTL3-201ENST00000321110 PRIMPOLQ96LW4 560 aa9.82□□□□□ -0.84
RTL3-201ENST00000321110 ZNF830Q96NB3 372 aaPredicted RBP9.82□□□□□ -0.84
RTL3-201ENST00000321110 TMEM63CQ9P1W3 806 aa9.82□□□□□ -0.84
RTL3-201ENST00000321110 CCDC141Q6ZP82 1450 aa9.81□□□□□ -0.84
RTL3-201ENST00000321110 SYCE3A1L190 88 aa9.81□□□□□ -0.84
RTL3-201ENST00000321110 HMGN5P82970 282 aaKnown RBP9.81□□□□□ -0.84
RTL3-201ENST00000321110 DNTTIP2Q5QJE6 756 aaKnown RBP9.81□□□□□ -0.84
RTL3-201ENST00000321110 FTSJ3Q8IY81 847 aaKnown RBP9.81□□□□□ -0.84
RTL3-201ENST00000321110 RNF214Q8ND24 703 aa9.81□□□□□ -0.84
RTL3-201ENST00000321110 PHF23Q9BUL5 403 aaPredicted RBP9.81□□□□□ -0.84
RTL3-201ENST00000321110 PRPF40AO75400 957 aaKnown RBP9.81□□□□□ -0.84
RTL3-201ENST00000321110 ZKSCAN2Q63HK3 967 aa9.81□□□□□ -0.84
RTL3-201ENST00000321110 LNPKQ9C0E8 428 aa9.81□□□□□ -0.84
RTL3-201ENST00000321110 ERCC6L2Q5T890 1561 aa9.81□□□□□ -0.84
RTL3-201ENST00000321110 NUCB1Q02818 461 aa9.8□□□□□ -0.84
RTL3-201ENST00000321110 NSFL1CQ9UNZ2 370 aaKnown RBP9.8□□□□□ -0.84
RTL3-201ENST00000321110 KIF16BQ96L93 1317 aa9.8□□□□□ -0.84
RTL3-201ENST00000321110 EIF2AK4Q9P2K8 1649 aaKnown RBP9.8□□□□□ -0.84
RTL3-201ENST00000321110 CHAMP1Q96JM3 812 aa9.8□□□□□ -0.84
RTL3-201ENST00000321110 BCL2L12Q9HB09 334 aa9.8□□□□□ -0.84
RTL3-201ENST00000321110 PTMAP06454 111 aaKnown RBP9.79□□□□□ -0.84
RTL3-201ENST00000321110 TCP11L2Q8N4U5 519 aa9.79□□□□□ -0.84
RTL3-201ENST00000321110 MPNDQ8N594 471 aa9.79□□□□□ -0.84
RTL3-201ENST00000321110 CGNQ9P2M7 1197 aaKnown RBP9.79□□□□□ -0.84
RTL3-201ENST00000321110 SAMD9LQ8IVG5 1584 aa9.79□□□□□ -0.84
RTL3-201ENST00000321110 CDC42BPBQ9Y5S2 1711 aa9.79□□□□□ -0.84
RTL3-201ENST00000321110 TRIM27P14373 513 aa9.79□□□□□ -0.84
RTL3-201ENST00000321110 NUCB2P80303 420 aa9.79□□□□□ -0.84
RTL3-201ENST00000321110 BMP2KLQ5H9B9 411 aa9.79□□□□□ -0.84
RTL3-201ENST00000321110 C17orf53Q8N3J3 647 aaPredicted RBP9.79□□□□□ -0.84
RTL3-201ENST00000321110 KIF3AQ9Y496 699 aa9.79□□□□□ -0.84
RTL3-201ENST00000321110 IQSEC2Q5JU85 1478 aa9.79□□□□□ -0.84
RTL3-201ENST00000321110 PREX2Q70Z35 1606 aa9.79□□□□□ -0.84
RTL3-201ENST00000321110 RNF17Q9BXT8 1623 aaKnown RBP9.79□□□□□ -0.84
RTL3-201ENST00000321110 HNRNPMP52272 730 aaKnown RBP eCLIP9.78□□□□□ -0.84
RTL3-201ENST00000321110 TBC1D9Q6ZT07 1266 aa9.78□□□□□ -0.84
RTL3-201ENST00000321110 ITPRIPQ8IWB1 547 aa9.78□□□□□ -0.84
RTL3-201ENST00000321110 WDR63Q8IWG1 891 aa9.78□□□□□ -0.84
RTL3-201ENST00000321110 OSCARQ8IYS5 282 aa9.78□□□□□ -0.84
RTL3-201ENST00000321110 PIBF1Q8WXW3 757 aa9.78□□□□□ -0.84
RTL3-201ENST00000321110 AK9Q5TCS8 1911 aa9.78□□□□□ -0.84
RTL3-201ENST00000321110 MYOM1P52179 1685 aa9.78□□□□□ -0.84
RTL3-201ENST00000321110 U2AF2P26368 475 aaKnown RBP eCLIP9.78□□□□□ -0.84
RTL3-201ENST00000321110 NOLC1Q14978 699 aaKnown RBP eCLIP9.78□□□□□ -0.84
RTL3-201ENST00000321110 PDCL2Q8N4E4 241 aa9.78□□□□□ -0.84
RTL3-201ENST00000321110 TAF3Q5VWG9 929 aa9.77□□□□□ -0.85
RTL3-201ENST00000321110 CHD1LQ86WJ1 897 aa9.77□□□□□ -0.85
RTL3-201ENST00000321110 RUNDC1Q96C34 613 aa9.77□□□□□ -0.85
RTL3-201ENST00000321110 ZDHHC9Q9Y397 364 aa9.77□□□□□ -0.85
RTL3-201ENST00000321110 POLR3AO14802 1390 aaPredicted RBP9.77□□□□□ -0.85
RTL3-201ENST00000321110 KANK1Q14678 1352 aa9.77□□□□□ -0.85
RTL3-201ENST00000321110 CDCA8Q53HL2 280 aa9.77□□□□□ -0.85
RTL3-201ENST00000321110 PLCD3Q8N3E9 789 aa9.77□□□□□ -0.85
RTL3-201ENST00000321110 CARD14Q9BXL6 1004 aa9.77□□□□□ -0.85
RTL3-201ENST00000321110 DDX19BQ9UMR2 479 aa9.77□□□□□ -0.85
RTL3-201ENST00000321110 MYO5CQ9NQX4 1742 aa9.76□□□□□ -0.85
RTL3-201ENST00000321110 UNC13BO14795 1591 aa9.76□□□□□ -0.85
RTL3-201ENST00000321110 ZBTB40Q9NUA8 1239 aa9.76□□□□□ -0.85
RTL3-201ENST00000321110 FKBP5Q13451 457 aaPredicted RBP9.75□□□□□ -0.85
RTL3-201ENST00000321110 ZGPATQ8N5A5 531 aaKnown RBP9.75□□□□□ -0.85
RTL3-201ENST00000321110 SMC4Q9NTJ3 1288 aa9.75□□□□□ -0.85
RTL3-201ENST00000321110 CFAP74Q9C0B2 1584 aa9.75□□□□□ -0.85
RTL3-201ENST00000321110 TMEM57Q8N5G2 664 aa9.75□□□□□ -0.85
RTL3-201ENST00000321110 ANKRD7Q92527 254 aa9.75□□□□□ -0.85
RTL3-201ENST00000321110 TTC12Q9H892 705 aaPredicted RBP9.75□□□□□ -0.85
RTL3-201ENST00000321110 MAST1Q9Y2H9 1570 aa9.75□□□□□ -0.85
RTL3-201ENST00000321110 RSPH4AQ5TD94 716 aa9.74□□□□□ -0.85
RTL3-201ENST00000321110 ATF7IPQ6VMQ6 1270 aa9.74□□□□□ -0.85
RTL3-201ENST00000321110 ZNF771Q7L3S4 317 aaPredicted RBP9.74□□□□□ -0.85
RTL3-201ENST00000321110 TSR2Q969E8 191 aaKnown RBP9.74□□□□□ -0.85
RTL3-201ENST00000321110 SPTLC3Q9NUV7 552 aa9.74□□□□□ -0.85
RTL3-201ENST00000321110 IQGAP1P46940 1657 aa9.74□□□□□ -0.85
RTL3-201ENST00000321110 SHPRHQ149N8 1683 aa9.74□□□□□ -0.85
RTL3-201ENST00000321110 SSH1Q8WYL5 1049 aa9.74□□□□□ -0.85
RTL3-201ENST00000321110 SYCP2Q9BX26 1530 aa9.73□□□□□ -0.85
RTL3-201ENST00000321110 IRX5P78411 483 aaPredicted RBP9.73□□□□□ -0.85
RTL3-201ENST00000321110 RABEP1Q15276 862 aa9.73□□□□□ -0.85
RTL3-201ENST00000321110 CCDC27Q2M243 656 aa9.73□□□□□ -0.85
RTL3-201ENST00000321110 TSPY26PQ9H489 355 aa9.73□□□□□ -0.85
RTL3-201ENST00000321110 IQGAP3Q86VI3 1631 aa9.73□□□□□ -0.85
RTL3-201ENST00000321110 RIOK3O14730 519 aaKnown RBP9.72□□□□□ -0.85
RTL3-201ENST00000321110 NOB1Q9ULX3 412 aaKnown RBP9.72□□□□□ -0.85
RTL3-201ENST00000321110 EXOSC9Q06265 439 aaKnown RBP9.72□□□□□ -0.85
RTL3-201ENST00000321110 ANKRD45Q5TZF3 282 aa9.72□□□□□ -0.85
RTL3-201ENST00000321110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.72□□□□□ -0.85
RTL3-201ENST00000321110 CWC22Q9HCG8 908 aaKnown RBP9.72□□□□□ -0.85
RTL3-201ENST00000321110 SCAF11Q99590 1463 aaKnown RBP9.72□□□□□ -0.85
RTL3-201ENST00000321110 FOXD4L5Q5VV16 416 aaPredicted RBP9.71□□□□□ -0.85
RTL3-201ENST00000321110 FOXD4L4Q8WXT5 416 aaPredicted RBP9.71□□□□□ -0.85
RTL3-201ENST00000321110 USP25Q9UHP3 1055 aa9.71□□□□□ -0.85
RTL3-201ENST00000321110 TTC37Q6PGP7 1564 aa9.71□□□□□ -0.85
RTL3-201ENST00000321110 MBD3O95983 291 aa9.71□□□□□ -0.86
RTL3-201ENST00000321110 FEZ1Q99689 392 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms