RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 KNDC1Q76NI1 1749 aa19.97■□□□□ 0.79
SYCN-201ENST00000318438 PMFBP1Q8TBY8 1022 aa19.97■□□□□ 0.79
SYCN-201ENST00000318438 IFT172Q9UG01 1749 aa19.96■□□□□ 0.79
SYCN-201ENST00000318438 RRBP1Q9P2E9 1410 aaKnown RBP19.96■□□□□ 0.79
SYCN-201ENST00000318438 YTHDC2Q9H6S0 1430 aaKnown RBP19.94■□□□□ 0.78
SYCN-201ENST00000318438 SPATA31A1Q5TZJ5 1347 aa19.94■□□□□ 0.78
SYCN-201ENST00000318438 PRDM11Q9NQV5 511 aa19.92■□□□□ 0.78
SYCN-201ENST00000318438 C1QTNF8P60827 252 aa19.91■□□□□ 0.78
SYCN-201ENST00000318438 SAFB2Q14151 953 aaKnown RBP eCLIP19.91■□□□□ 0.78
SYCN-201ENST00000318438 TRPM3Q9HCF6 1732 aaPredicted RBP19.9■□□□□ 0.78
SYCN-201ENST00000318438 RGL3Q3MIN7 710 aa19.9■□□□□ 0.78
SYCN-201ENST00000318438 STRN4Q9NRL3 753 aa19.9■□□□□ 0.78
SYCN-201ENST00000318438 CEP350Q5VT06 3117 aa19.89■□□□□ 0.77
SYCN-201ENST00000318438 ALS2Q96Q42 1657 aa19.88■□□□□ 0.77
SYCN-201ENST00000318438 USP35Q9P2H5 1018 aa19.88■□□□□ 0.77
SYCN-201ENST00000318438 PIK3C2GO75747 1445 aa19.87■□□□□ 0.77
SYCN-201ENST00000318438 PDE3BQ13370 1112 aa19.87■□□□□ 0.77
SYCN-201ENST00000318438 CHRNA2Q15822 529 aa19.87■□□□□ 0.77
SYCN-201ENST00000318438 SIRT1Q96EB6 747 aa19.87■□□□□ 0.77
SYCN-201ENST00000318438 SLC4A1APQ9BWU0 796 aaKnown RBP19.86■□□□□ 0.77
SYCN-201ENST00000318438 NRKQ7Z2Y5 1582 aa19.86■□□□□ 0.77
SYCN-201ENST00000318438 GPRASP1Q5JY77 1395 aa19.85■□□□□ 0.77
SYCN-201ENST00000318438 KIAA0232Q92628 1395 aa19.85■□□□□ 0.77
SYCN-201ENST00000318438 ANKRD30BQ9BXX2 1392 aa19.85■□□□□ 0.77
SYCN-201ENST00000318438 PRAM1Q96QH2 718 aa19.85■□□□□ 0.77
SYCN-201ENST00000318438 CRYBG1Q9Y4K1 1723 aa19.85■□□□□ 0.77
SYCN-201ENST00000318438 ANKARQ7Z5J8 1434 aa19.85■□□□□ 0.77
SYCN-201ENST00000318438 ACIN1Q9UKV3 1341 aaKnown RBP19.84■□□□□ 0.77
SYCN-201ENST00000318438 PDGFDQ9GZP0 370 aaPredicted RBP19.84■□□□□ 0.77
SYCN-201ENST00000318438 ANO8Q9HCE9 1232 aaPredicted RBP19.83■□□□□ 0.77
SYCN-201ENST00000318438 SPATA31E1Q6ZUB1 1445 aa19.83■□□□□ 0.76
SYCN-201ENST00000318438 PAK3O75914 559 aaPredicted RBP19.82■□□□□ 0.76
SYCN-201ENST00000318438 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
SYCN-201ENST00000318438 ZBTB7AO95365 584 aa19.81■□□□□ 0.76
SYCN-201ENST00000318438 BARGINQ6ZT62 677 aa19.81■□□□□ 0.76
SYCN-201ENST00000318438 MYOM1P52179 1685 aa19.8■□□□□ 0.76
SYCN-201ENST00000318438 CASZ1Q86V15 1759 aa19.79■□□□□ 0.76
SYCN-201ENST00000318438 PRR36Q9H6K5 1346 aa19.78■□□□□ 0.76
SYCN-201ENST00000318438 SSH2Q76I76 1423 aa19.78■□□□□ 0.76
SYCN-201ENST00000318438 PTGER2P43116 358 aa19.78■□□□□ 0.76
SYCN-201ENST00000318438 ZC3H6P61129 1189 aaKnown RBP19.78■□□□□ 0.76
SYCN-201ENST00000318438 HIRIP3Q9BW71 556 aaPredicted RBP19.78■□□□□ 0.76
SYCN-201ENST00000318438 C14orf93Q9H972 538 aaKnown RBP19.78■□□□□ 0.76
SYCN-201ENST00000318438 DHX57Q6P158 1386 aaKnown RBP19.78■□□□□ 0.76
SYCN-201ENST00000318438 EVA1CP58658 441 aa19.77■□□□□ 0.76
SYCN-201ENST00000318438 CFAP70Q5T0N1 1121 aa19.77■□□□□ 0.76
SYCN-201ENST00000318438 POGKQ9P215 609 aa19.77■□□□□ 0.76
SYCN-201ENST00000318438 ATF5Q9Y2D1 282 aaPredicted RBP19.77■□□□□ 0.76
SYCN-201ENST00000318438 LARP1Q6PKG0 1096 aaKnown RBP19.76■□□□□ 0.75
SYCN-201ENST00000318438 FHDC1Q9C0D6 1143 aaPredicted RBP19.76■□□□□ 0.75
SYCN-201ENST00000318438 TCP11L2Q8N4U5 519 aa19.75■□□□□ 0.75
SYCN-201ENST00000318438 NGDNQ8NEJ9 315 aaKnown RBP19.75■□□□□ 0.75
SYCN-201ENST00000318438 SYT17Q9BSW7 474 aa19.75■□□□□ 0.75
SYCN-201ENST00000318438 NUTM2GQ5VZR2 741 aa19.73■□□□□ 0.75
SYCN-201ENST00000318438 PHRF1Q9P1Y6 1649 aaKnown RBP19.73■□□□□ 0.75
SYCN-201ENST00000318438 BCL11BQ9C0K0 894 aaPredicted RBP19.72■□□□□ 0.75
SYCN-201ENST00000318438 MINK1Q8N4C8 1332 aaPredicted RBP19.72■□□□□ 0.75
SYCN-201ENST00000318438 PLSCR1O15162 318 aa19.71■□□□□ 0.75
SYCN-201ENST00000318438 PTF1AQ7RTS3 328 aa19.71■□□□□ 0.75
SYCN-201ENST00000318438 TULP4Q9NRJ4 1543 aa19.71■□□□□ 0.75
SYCN-201ENST00000318438 GIGYF1O75420 1035 aaPredicted RBP19.7■□□□□ 0.74
SYCN-201ENST00000318438 DLC1Q96QB1 1528 aa19.7■□□□□ 0.74
SYCN-201ENST00000318438 RGPD3A6NKT7 1758 aaPredicted RBP19.69■□□□□ 0.74
SYCN-201ENST00000318438 RGPD4Q7Z3J3 1758 aa19.69■□□□□ 0.74
SYCN-201ENST00000318438 EIF3AQ14152 1382 aaKnown RBP19.69■□□□□ 0.74
SYCN-201ENST00000318438 OVOS2A0A0G2JMS6 1433 aa19.68■□□□□ 0.74
SYCN-201ENST00000318438 OVOS2A0A0J9YW53 1432 aa19.68■□□□□ 0.74
SYCN-201ENST00000318438 OVOS2Q6IE36 1432 aa19.68■□□□□ 0.74
SYCN-201ENST00000318438 PROM2Q8N271 834 aa19.68■□□□□ 0.74
SYCN-201ENST00000318438 GOLGB1Q14789 3259 aaKnown RBP19.68■□□□□ 0.74
SYCN-201ENST00000318438 CHD4Q14839 1912 aa19.68■□□□□ 0.74
SYCN-201ENST00000318438 THRAP3Q9Y2W1 955 aaKnown RBP19.67■□□□□ 0.74
SYCN-201ENST00000318438 PEAK1Q9H792 1746 aa19.67■□□□□ 0.74
SYCN-201ENST00000318438 PARP4Q9UKK3 1724 aaKnown RBP19.66■□□□□ 0.74
SYCN-201ENST00000318438 C11orf95C9JLR9 678 aaPredicted RBP19.66■□□□□ 0.74
SYCN-201ENST00000318438 WASLO00401 505 aaPredicted RBP19.66■□□□□ 0.74
SYCN-201ENST00000318438 TRAK1Q9UPV9 953 aa19.66■□□□□ 0.74
SYCN-201ENST00000318438 SGIP1Q9BQI5 828 aa19.64■□□□□ 0.73
SYCN-201ENST00000318438 ATP7BP35670 1465 aa19.64■□□□□ 0.73
SYCN-201ENST00000318438 LMO7Q8WWI1 1683 aa19.64■□□□□ 0.73
SYCN-201ENST00000318438 STK32BQ9NY57 414 aa19.63■□□□□ 0.73
SYCN-201ENST00000318438 MTFR1LQ9H019 292 aa19.62■□□□□ 0.73
SYCN-201ENST00000318438 SBF2Q86WG5 1849 aa19.6■□□□□ 0.73
SYCN-201ENST00000318438 CPDO75976 1380 aa19.6■□□□□ 0.73
SYCN-201ENST00000318438 SLC15A2Q16348 729 aa19.6■□□□□ 0.73
SYCN-201ENST00000318438 GPR162Q16538 588 aa19.6■□□□□ 0.73
SYCN-201ENST00000318438 ADGRB1O14514 1584 aa19.6■□□□□ 0.73
SYCN-201ENST00000318438 COL5A2P05997 1499 aaPredicted RBP19.6■□□□□ 0.73
SYCN-201ENST00000318438 LRRC37A3O60309 1634 aa19.59■□□□□ 0.73
SYCN-201ENST00000318438 TXNRD1Q16881 649 aa19.59■□□□□ 0.73
SYCN-201ENST00000318438 NUDT16Q96DE0 195 aaKnown RBP19.59■□□□□ 0.73
SYCN-201ENST00000318438 ARXQ96QS3 562 aa19.59■□□□□ 0.73
SYCN-201ENST00000318438 DDB1Q16531 1140 aa19.58■□□□□ 0.72
SYCN-201ENST00000318438 CRB1P82279 1406 aa19.58■□□□□ 0.72
SYCN-201ENST00000318438 MPHOSPH9Q99550 1183 aa19.57■□□□□ 0.72
SYCN-201ENST00000318438 ABTB2Q8N961 1025 aa19.56■□□□□ 0.72
SYCN-201ENST00000318438 MAP3K5Q99683 1374 aa19.56■□□□□ 0.72
SYCN-201ENST00000318438 USP19O94966 1318 aa19.55■□□□□ 0.72
SYCN-201ENST00000318438 MARCH10Q8NA82 808 aaPredicted RBP19.55■□□□□ 0.72
SYCN-201ENST00000318438 ACEP12821 1306 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms