RNA–Protein interactions for RNA: ENST00000316461.8

TTC9C-202, Transcript of tetratricopeptide repeat domain 9C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-202ENST00000316461 TRIM26Q12899 539 aaPredicted RBP11.17□□□□□ -0.62
TTC9C-202ENST00000316461 NUDT16Q96DE0 195 aaKnown RBP11.17□□□□□ -0.62
TTC9C-202ENST00000316461 CDK19Q9BWU1 502 aa11.17□□□□□ -0.62
TTC9C-202ENST00000316461 PLCH1Q4KWH8 1693 aa11.17□□□□□ -0.62
TTC9C-202ENST00000316461 SBNO1A3KN83 1393 aa11.16□□□□□ -0.62
TTC9C-202ENST00000316461 SRPK2P78362 688 aaKnown RBP11.16□□□□□ -0.62
TTC9C-202ENST00000316461 CHRNA2Q15822 529 aa11.16□□□□□ -0.62
TTC9C-202ENST00000316461 CAMKK2Q96RR4 588 aa11.16□□□□□ -0.62
TTC9C-202ENST00000316461 TRIM37O94972 964 aa11.15□□□□□ -0.62
TTC9C-202ENST00000316461 STAC3Q96MF2 364 aa11.15□□□□□ -0.62
TTC9C-202ENST00000316461 KIF1AQ12756 1690 aa11.14□□□□□ -0.63
TTC9C-202ENST00000316461 NRXN1Q9ULB1 1477 aa11.14□□□□□ -0.63
TTC9C-202ENST00000316461 SENP3-EIF4A1A0A087X0R7 540 aa11.14□□□□□ -0.63
TTC9C-202ENST00000316461 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
TTC9C-202ENST00000316461 ABTB2Q8N961 1025 aa11.14□□□□□ -0.63
TTC9C-202ENST00000316461 FMN2Q9NZ56 1722 aa11.14□□□□□ -0.63
TTC9C-202ENST00000316461 PRR36Q9H6K5 1346 aa11.13□□□□□ -0.63
TTC9C-202ENST00000316461 TNS1Q9HBL0 1735 aaKnown RBP11.13□□□□□ -0.63
TTC9C-202ENST00000316461 ANKARQ7Z5J8 1434 aa11.13□□□□□ -0.63
TTC9C-202ENST00000316461 NEUROD1Q13562 356 aa11.13□□□□□ -0.63
TTC9C-202ENST00000316461 CAMTA1Q9Y6Y1 1673 aa11.13□□□□□ -0.63
TTC9C-202ENST00000316461 RGPD1P0DJD0 1748 aa11.12□□□□□ -0.63
TTC9C-202ENST00000316461 KNDC1Q76NI1 1749 aa11.12□□□□□ -0.63
TTC9C-202ENST00000316461 IFT172Q9UG01 1749 aa11.12□□□□□ -0.63
TTC9C-202ENST00000316461 APBA3O96018 575 aa11.12□□□□□ -0.63
TTC9C-202ENST00000316461 PPP1R1BQ9UD71 204 aaPredicted RBP11.12□□□□□ -0.63
TTC9C-202ENST00000316461 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
TTC9C-202ENST00000316461 ZNF784Q8NCA9 323 aaPredicted RBP11.11□□□□□ -0.63
TTC9C-202ENST00000316461 NWD2Q9ULI1 1742 aa11.11□□□□□ -0.63
TTC9C-202ENST00000316461 ACEP12821 1306 aa11.1□□□□□ -0.63
TTC9C-202ENST00000316461 DISP2A7MBM2 1401 aa11.1□□□□□ -0.63
TTC9C-202ENST00000316461 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
TTC9C-202ENST00000316461 NBPF8Q3BBV2 869 aa11.1□□□□□ -0.63
TTC9C-202ENST00000316461 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
TTC9C-202ENST00000316461 CCDC61Q9Y6R9 512 aa11.1□□□□□ -0.63
TTC9C-202ENST00000316461 DLC1Q96QB1 1528 aa11.09□□□□□ -0.63
TTC9C-202ENST00000316461 NRAPQ86VF7 1730 aa11.09□□□□□ -0.63
TTC9C-202ENST00000316461 ABCA3Q99758 1704 aa11.09□□□□□ -0.63
TTC9C-202ENST00000316461 SPATA31A5Q5VU36 1347 aa11.09□□□□□ -0.63
TTC9C-202ENST00000316461 SPATA31A7Q8IWB4 1347 aa11.09□□□□□ -0.63
TTC9C-202ENST00000316461 RGPD8O14715 1765 aaPredicted RBP11.08□□□□□ -0.64
TTC9C-202ENST00000316461 KIAA0232Q92628 1395 aa11.08□□□□□ -0.64
TTC9C-202ENST00000316461 SOX12O15370 315 aa11.08□□□□□ -0.64
TTC9C-202ENST00000316461 NLRP13Q86W25 1043 aa11.08□□□□□ -0.64
TTC9C-202ENST00000316461 SPON1Q9HCB6 807 aa11.08□□□□□ -0.64
TTC9C-202ENST00000316461 KCNQ2O43526 872 aa11.07□□□□□ -0.64
TTC9C-202ENST00000316461 PDGFDQ9GZP0 370 aaPredicted RBP11.07□□□□□ -0.64
TTC9C-202ENST00000316461 TULP4Q9NRJ4 1543 aa11.07□□□□□ -0.64
TTC9C-202ENST00000316461 CENPJQ9HC77 1338 aaPredicted RBP11.07□□□□□ -0.64
TTC9C-202ENST00000316461 THSD7AQ9UPZ6 1657 aa11.06□□□□□ -0.64
TTC9C-202ENST00000316461 DCAF8L1A6NGE4 600 aa11.06□□□□□ -0.64
TTC9C-202ENST00000316461 NLRP6P59044 892 aa11.06□□□□□ -0.64
TTC9C-202ENST00000316461 CABP1Q9NZU7 370 aa11.06□□□□□ -0.64
TTC9C-202ENST00000316461 NUP188Q5SRE5 1749 aa11.06□□□□□ -0.64
TTC9C-202ENST00000316461 ADGRB1O14514 1584 aa11.05□□□□□ -0.64
TTC9C-202ENST00000316461 C1QTNF8P60827 252 aa11.05□□□□□ -0.64
TTC9C-202ENST00000316461 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
TTC9C-202ENST00000316461 FAM196AQ6ZSG2 479 aa11.05□□□□□ -0.64
TTC9C-202ENST00000316461 SPATA31A1Q5TZJ5 1347 aa11.05□□□□□ -0.64
TTC9C-202ENST00000316461 CSB-PGBD3P0DP91 1061 aa11.04□□□□□ -0.64
TTC9C-202ENST00000316461 NBPF14Q5TI25 921 aa11.04□□□□□ -0.64
TTC9C-202ENST00000316461 SIN3AQ96ST3 1273 aa11.04□□□□□ -0.64
TTC9C-202ENST00000316461 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
TTC9C-202ENST00000316461 PLEKHG3A1L390 1219 aa11.03□□□□□ -0.64
TTC9C-202ENST00000316461 GCP02774 474 aa11.03□□□□□ -0.64
TTC9C-202ENST00000316461 TOM1L2Q6ZVM7 507 aa11.03□□□□□ -0.64
TTC9C-202ENST00000316461 TCP11L2Q8N4U5 519 aa11.03□□□□□ -0.64
TTC9C-202ENST00000316461 L3MBTL2Q969R5 705 aa11.03□□□□□ -0.64
TTC9C-202ENST00000316461 RREB1Q92766 1687 aa11.03□□□□□ -0.64
TTC9C-202ENST00000316461 ADGRB2O60241 1585 aa11.03□□□□□ -0.64
TTC9C-202ENST00000316461 PPIP5K1Q6PFW1 1433 aa11.02□□□□□ -0.64
TTC9C-202ENST00000316461 ANO8Q9HCE9 1232 aaPredicted RBP11.02□□□□□ -0.65
TTC9C-202ENST00000316461 EVC2Q86UK5 1308 aa11.02□□□□□ -0.65
TTC9C-202ENST00000316461 COL14A1Q05707 1796 aaKnown RBP11.01□□□□□ -0.65
TTC9C-202ENST00000316461 ZBTB7AO95365 584 aa11.01□□□□□ -0.65
TTC9C-202ENST00000316461 TMC1Q8TDI8 760 aa11.01□□□□□ -0.65
TTC9C-202ENST00000316461 NRKQ7Z2Y5 1582 aa11□□□□□ -0.65
TTC9C-202ENST00000316461 UTRNP46939 3433 aa11□□□□□ -0.65
TTC9C-202ENST00000316461 PTF1AQ7RTS3 328 aa11□□□□□ -0.65
TTC9C-202ENST00000316461 ATF5Q9Y2D1 282 aaPredicted RBP11□□□□□ -0.65
TTC9C-202ENST00000316461 CEP350Q5VT06 3117 aa11□□□□□ -0.65
TTC9C-202ENST00000316461 PARD3Q8TEW0 1356 aa11□□□□□ -0.65
TTC9C-202ENST00000316461 ATP7BP35670 1465 aa11□□□□□ -0.65
TTC9C-202ENST00000316461 ROCK2O75116 1388 aaKnown RBP10.99□□□□□ -0.65
TTC9C-202ENST00000316461 DDB1Q16531 1140 aa10.98□□□□□ -0.65
TTC9C-202ENST00000316461 BARGINQ6ZT62 677 aa10.98□□□□□ -0.65
TTC9C-202ENST00000316461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.98□□□□□ -0.65
TTC9C-202ENST00000316461 THRAP3Q9Y2W1 955 aaKnown RBP10.98□□□□□ -0.65
TTC9C-202ENST00000316461 POLR3AO14802 1390 aaPredicted RBP10.98□□□□□ -0.65
TTC9C-202ENST00000316461 TRPM3Q9HCF6 1732 aaPredicted RBP10.98□□□□□ -0.65
TTC9C-202ENST00000316461 PTGER2P43116 358 aa10.97□□□□□ -0.65
TTC9C-202ENST00000316461 ZNF692Q9BU19 519 aaPredicted RBP10.97□□□□□ -0.65
TTC9C-202ENST00000316461 FHDC1Q9C0D6 1143 aaPredicted RBP10.97□□□□□ -0.65
TTC9C-202ENST00000316461 SSH2Q76I76 1423 aa10.97□□□□□ -0.65
TTC9C-202ENST00000316461 MYOM1P52179 1685 aa10.97□□□□□ -0.65
TTC9C-202ENST00000316461 KCNH5Q8NCM2 988 aa10.96□□□□□ -0.65
TTC9C-202ENST00000316461 CARD11Q9BXL7 1154 aa10.96□□□□□ -0.65
TTC9C-202ENST00000316461 PCGF6Q9BYE7 350 aa10.96□□□□□ -0.65
TTC9C-202ENST00000316461 ALS2Q96Q42 1657 aa10.95□□□□□ -0.66
TTC9C-202ENST00000316461 SYT17Q9BSW7 474 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms