RNA–Protein interactions for RNA: ENST00000315251.10

CHDH-201, Transcript of choline dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHDH, Length 7,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHDH-201ENST00000315251 TSPY26PQ9H489 355 aa17.96■□□□□ 0.47
CHDH-201ENST00000315251 STK3Q13188 491 aa17.96■□□□□ 0.47
CHDH-201ENST00000315251 SLC3A2P08195 630 aaKnown RBP17.96■□□□□ 0.47
CHDH-201ENST00000315251 ZNHIT6Q9NWK9 470 aaKnown RBP17.96■□□□□ 0.47
CHDH-201ENST00000315251 SURF6O75683 361 aaKnown RBP17.95■□□□□ 0.46
CHDH-201ENST00000315251 IBSPP21815 317 aaPredicted RBP17.95■□□□□ 0.46
CHDH-201ENST00000315251 NEK4P51957 841 aa17.95■□□□□ 0.46
CHDH-201ENST00000315251 FHOD3Q2V2M9 1422 aa17.95■□□□□ 0.46
CHDH-201ENST00000315251 CLASRPQ8N2M8 674 aaKnown RBP17.95■□□□□ 0.46
CHDH-201ENST00000315251 RSPH4AQ5TD94 716 aa17.95■□□□□ 0.46
CHDH-201ENST00000315251 CCDC181Q5TID7 509 aa17.95■□□□□ 0.46
CHDH-201ENST00000315251 TRAK2O60296 914 aa17.94■□□□□ 0.46
CHDH-201ENST00000315251 FAM193AP78312 1265 aa17.94■□□□□ 0.46
CHDH-201ENST00000315251 CCDC97Q96F63 343 aaPredicted RBP17.94■□□□□ 0.46
CHDH-201ENST00000315251 KIF6Q6ZMV9 814 aa17.94■□□□□ 0.46
CHDH-201ENST00000315251 SEPT11Q9NVA2 429 aaKnown RBP17.94■□□□□ 0.46
CHDH-201ENST00000315251 STK38Q15208 465 aa17.94■□□□□ 0.46
CHDH-201ENST00000315251 MRE11P49959 708 aa17.94■□□□□ 0.46
CHDH-201ENST00000315251 CCDC66A2RUB6 948 aa17.93■□□□□ 0.46
CHDH-201ENST00000315251 LETM1O95202 739 aaPredicted RBP17.93■□□□□ 0.46
CHDH-201ENST00000315251 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
CHDH-201ENST00000315251 C1orf115Q9H7X2 142 aa17.93■□□□□ 0.46
CHDH-201ENST00000315251 CNNM1Q9NRU3 951 aa17.93■□□□□ 0.46
CHDH-201ENST00000315251 TTC39AQ5SRH9 613 aa17.92■□□□□ 0.46
CHDH-201ENST00000315251 RBM42Q9BTD8 480 aaKnown RBP17.92■□□□□ 0.46
CHDH-201ENST00000315251 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
CHDH-201ENST00000315251 KIAA0754O94854 1291 aa17.91■□□□□ 0.46
CHDH-201ENST00000315251 GGNBP2Q9H3C7 697 aa17.91■□□□□ 0.46
CHDH-201ENST00000315251 ANKRD18AQ8IVF6 992 aa17.91■□□□□ 0.46
CHDH-201ENST00000315251 CCP110O43303 1012 aa17.91■□□□□ 0.46
CHDH-201ENST00000315251 ZNF396Q96N95 335 aaPredicted RBP17.91■□□□□ 0.46
CHDH-201ENST00000315251 PPFIBP1Q86W92 1011 aa17.9■□□□□ 0.46
CHDH-201ENST00000315251 MAP4K4O95819 1239 aaPredicted RBP17.9■□□□□ 0.46
CHDH-201ENST00000315251 MATR3P43243 847 aaKnown RBP eCLIP17.9■□□□□ 0.464e-7■■■□□ 17.4
CHDH-201ENST00000315251 FANCIQ9NVI1 1328 aa17.89■□□□□ 0.45
CHDH-201ENST00000315251 RBM5P52756 815 aaKnown RBP eCLIP17.89■□□□□ 0.451e-6■■■□□ 18.3
CHDH-201ENST00000315251 ME1P48163 572 aa17.88■□□□□ 0.45
CHDH-201ENST00000315251 SIL1Q9H173 461 aa17.88■□□□□ 0.45
CHDH-201ENST00000315251 LRRFIP2Q9Y608 721 aaKnown RBP17.88■□□□□ 0.45
CHDH-201ENST00000315251 MTERF4Q7Z6M4 381 aaKnown RBP17.88■□□□□ 0.45
CHDH-201ENST00000315251 NUP133Q8WUM0 1156 aa17.88■□□□□ 0.45
CHDH-201ENST00000315251 PDCP20941 246 aa17.88■□□□□ 0.45
CHDH-201ENST00000315251 CABP2Q9NPB3 220 aa17.88■□□□□ 0.45
CHDH-201ENST00000315251 STIM1Q13586 685 aa17.87■□□□□ 0.45
CHDH-201ENST00000315251 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
CHDH-201ENST00000315251 STRN4Q9NRL3 753 aa17.87■□□□□ 0.45
CHDH-201ENST00000315251 SSBP05455 408 aaKnown RBP eCLIP17.87■□□□□ 0.45
CHDH-201ENST00000315251 CCDC30Q5VVM6 783 aa17.86■□□□□ 0.45
CHDH-201ENST00000315251 LUC7LQ9NQ29 371 aaKnown RBP17.86■□□□□ 0.45
CHDH-201ENST00000315251 GOLGA6L7A0A1B0GV03 622 aa17.86■□□□□ 0.45
CHDH-201ENST00000315251 GBP2P32456 591 aaPredicted RBP17.86■□□□□ 0.45
CHDH-201ENST00000315251 TNMDQ9H2S6 317 aa17.86■□□□□ 0.45
CHDH-201ENST00000315251 NACADO15069 1562 aa17.86■□□□□ 0.45
CHDH-201ENST00000315251 NLRP6P59044 892 aa17.86■□□□□ 0.45
CHDH-201ENST00000315251 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
CHDH-201ENST00000315251 PIBF1Q8WXW3 757 aa17.86■□□□□ 0.45
CHDH-201ENST00000315251 NEBLO76041 1014 aa17.86■□□□□ 0.45
CHDH-201ENST00000315251 SSR1P43307 286 aaKnown RBP17.86■□□□□ 0.45
CHDH-201ENST00000315251 MBD3O95983 291 aa17.85■□□□□ 0.45
CHDH-201ENST00000315251 CCDC69A6NI79 296 aa17.85■□□□□ 0.45
CHDH-201ENST00000315251 EZRP15311 586 aaKnown RBP17.85■□□□□ 0.45
CHDH-201ENST00000315251 TAF3Q5VWG9 929 aa17.85■□□□□ 0.45
CHDH-201ENST00000315251 PIP4K2AP48426 406 aaPredicted RBP17.85■□□□□ 0.45
CHDH-201ENST00000315251 KIF7Q2M1P5 1343 aa17.85■□□□□ 0.45
CHDH-201ENST00000315251 CYB5RLQ6IPT4 315 aa17.84■□□□□ 0.45
CHDH-201ENST00000315251 KAT6BQ8WYB5 2073 aa17.84■□□□□ 0.45
CHDH-201ENST00000315251 ABTB2Q8N961 1025 aa17.84■□□□□ 0.45
CHDH-201ENST00000315251 HIP1O00291 1037 aa17.84■□□□□ 0.45
CHDH-201ENST00000315251 MAPK8IP2Q13387 824 aaPredicted RBP17.83■□□□□ 0.44
CHDH-201ENST00000315251 TRIM22Q8IYM9 498 aa17.83■□□□□ 0.44
CHDH-201ENST00000315251 JMYQ8N9B5 988 aa17.83■□□□□ 0.44
CHDH-201ENST00000315251 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.44
CHDH-201ENST00000315251 GNL3LQ9NVN8 582 aaKnown RBP17.83■□□□□ 0.44
CHDH-201ENST00000315251 CCDC192P0DO97 292 aa17.82■□□□□ 0.44
CHDH-201ENST00000315251 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHDH-201ENST00000315251 WASHC2AQ641Q2 1341 aa17.82■□□□□ 0.44
CHDH-201ENST00000315251 BRPF3Q9ULD4 1205 aa17.82■□□□□ 0.44
CHDH-201ENST00000315251 MPHOSPH10O00566 681 aaKnown RBP17.82■□□□□ 0.44
CHDH-201ENST00000315251 GNAI3P08754 354 aa17.82■□□□□ 0.44
CHDH-201ENST00000315251 PPM1FP49593 454 aaPredicted RBP17.82■□□□□ 0.44
CHDH-201ENST00000315251 FKBP4Q02790 459 aaKnown RBP eCLIP17.81■□□□□ 0.44
CHDH-201ENST00000315251 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
CHDH-201ENST00000315251 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
CHDH-201ENST00000315251 SOGA3Q5TF21 947 aa17.81■□□□□ 0.44
CHDH-201ENST00000315251 JPH4Q96JJ6 628 aa17.81■□□□□ 0.44
CHDH-201ENST00000315251 ZSCAN29Q8IWY8 852 aaPredicted RBP17.81■□□□□ 0.44
CHDH-201ENST00000315251 CYP46A1Q9Y6A2 500 aa17.8■□□□□ 0.44
CHDH-201ENST00000315251 MYL6BP14649 208 aa17.8■□□□□ 0.44
CHDH-201ENST00000315251 DACH1Q9UI36 760 aa17.8■□□□□ 0.44
CHDH-201ENST00000315251 MIA2Q96PC5 1412 aa17.8■□□□□ 0.44
CHDH-201ENST00000315251 PDS5BQ9NTI5 1447 aa17.8■□□□□ 0.44
CHDH-201ENST00000315251 ERICH4A6NGS2 130 aa17.8■□□□□ 0.44
CHDH-201ENST00000315251 GNAI2P04899 355 aa17.8■□□□□ 0.44
CHDH-201ENST00000315251 TMEM132EQ6IEE7 984 aa17.79■□□□□ 0.44
CHDH-201ENST00000315251 CCDC112Q8NEF3 446 aa17.79■□□□□ 0.44
CHDH-201ENST00000315251 MCM2P49736 904 aa17.79■□□□□ 0.44
CHDH-201ENST00000315251 MTHFSP49914 203 aa17.79■□□□□ 0.44
CHDH-201ENST00000315251 LRRCC1Q9C099 1032 aa17.79■□□□□ 0.44
CHDH-201ENST00000315251 HMGN5P82970 282 aaKnown RBP17.78■□□□□ 0.44
CHDH-201ENST00000315251 CHMP4BP1P59074 171 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms