RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 CNTROBQ8N137 903 aa12.26□□□□□ -0.45
PRPF8-201ENST00000304992 SNAPC4Q5SXM2 1469 aa12.26□□□□□ -0.45
PRPF8-201ENST00000304992 KIF21BO75037 1637 aa12.26□□□□□ -0.45
PRPF8-201ENST00000304992 CDCA7LQ96GN5 454 aa12.25□□□□□ -0.45
PRPF8-201ENST00000304992 SPG7Q9UQ90 795 aa12.25□□□□□ -0.45
PRPF8-201ENST00000304992 PPP2R1AP30153 589 aa12.25□□□□□ -0.45
PRPF8-201ENST00000304992 HOOK1Q9UJC3 728 aaKnown RBP12.25□□□□□ -0.45
PRPF8-201ENST00000304992 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
PRPF8-201ENST00000304992 C9orf84Q5VXU9 1444 aa12.25□□□□□ -0.45
PRPF8-201ENST00000304992 IPO7O95373 1038 aaKnown RBP12.25□□□□□ -0.45
PRPF8-201ENST00000304992 TMEM132AQ24JP5 1023 aa12.25□□□□□ -0.45
PRPF8-201ENST00000304992 RTEL1-TNFRSF6BF6WH68 1400 aa12.25□□□□□ -0.45
PRPF8-201ENST00000304992 CCDC85AQ96PX6 553 aaPredicted RBP12.25□□□□□ -0.45
PRPF8-201ENST00000304992 GNAI3P08754 354 aa12.24□□□□□ -0.45
PRPF8-201ENST00000304992 ADAMTS2O95450 1211 aa12.24□□□□□ -0.45
PRPF8-201ENST00000304992 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
PRPF8-201ENST00000304992 BRMS1Q9HCU9 246 aa12.24□□□□□ -0.45
PRPF8-201ENST00000304992 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
PRPF8-201ENST00000304992 CC2D2AQ9P2K1 1620 aa12.23□□□□□ -0.45
PRPF8-201ENST00000304992 MPHOSPH8Q99549 860 aa12.23□□□□□ -0.45
PRPF8-201ENST00000304992 SART3Q15020 963 aaKnown RBP12.23□□□□□ -0.45
PRPF8-201ENST00000304992 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
PRPF8-201ENST00000304992 SLC52A1Q9NWF4 448 aa12.23□□□□□ -0.45
PRPF8-201ENST00000304992 MAP4K4O95819 1239 aaPredicted RBP12.22□□□□□ -0.45
PRPF8-201ENST00000304992 CCDC158Q5M9N0 1113 aa12.22□□□□□ -0.45
PRPF8-201ENST00000304992 NAP1L1P55209 391 aaKnown RBP12.22□□□□□ -0.45
PRPF8-201ENST00000304992 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
PRPF8-201ENST00000304992 POGZQ7Z3K3 1410 aa12.22□□□□□ -0.45
PRPF8-201ENST00000304992 XBP1P17861 261 aa12.22□□□□□ -0.45
PRPF8-201ENST00000304992 GNL3LQ9NVN8 582 aaKnown RBP12.22□□□□□ -0.45
PRPF8-201ENST00000304992 ERBINQ96RT1 1412 aa12.22□□□□□ -0.45
PRPF8-201ENST00000304992 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
PRPF8-201ENST00000304992 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.45
PRPF8-201ENST00000304992 CCDC73Q6ZRK6 1079 aa12.21□□□□□ -0.45
PRPF8-201ENST00000304992 C22orf23Q9BZE7 217 aa12.21□□□□□ -0.45
PRPF8-201ENST00000304992 BTBD11A6QL63 1104 aa12.21□□□□□ -0.46
PRPF8-201ENST00000304992 SASS6Q6UVJ0 657 aa12.21□□□□□ -0.46
PRPF8-201ENST00000304992 CDC45O75419 566 aa12.21□□□□□ -0.46
PRPF8-201ENST00000304992 GNAI2P04899 355 aa12.21□□□□□ -0.46
PRPF8-201ENST00000304992 SLC3A2P08195 630 aaKnown RBP12.21□□□□□ -0.46
PRPF8-201ENST00000304992 EPS15P42566 896 aa12.2□□□□□ -0.46
PRPF8-201ENST00000304992 SKOR2Q2VWA4 1001 aaPredicted RBP12.2□□□□□ -0.46
PRPF8-201ENST00000304992 ZFYVE27Q5T4F4 411 aa12.2□□□□□ -0.46
PRPF8-201ENST00000304992 ZSCAN29Q8IWY8 852 aaPredicted RBP12.2□□□□□ -0.46
PRPF8-201ENST00000304992 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
PRPF8-201ENST00000304992 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
PRPF8-201ENST00000304992 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
PRPF8-201ENST00000304992 BCL11BQ9C0K0 894 aaPredicted RBP12.19□□□□□ -0.46
PRPF8-201ENST00000304992 PSMA5P28066 241 aa12.19□□□□□ -0.46
PRPF8-201ENST00000304992 FKBP4Q02790 459 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRPF8-201ENST00000304992 HOMER1Q86YM7 354 aa12.19□□□□□ -0.46
PRPF8-201ENST00000304992 CEBPAP49715 358 aaPredicted RBP12.19□□□□□ -0.46
PRPF8-201ENST00000304992 ODF2Q5BJF6 829 aa12.19□□□□□ -0.46
PRPF8-201ENST00000304992 CCDC70Q6NSX1 233 aa12.18□□□□□ -0.46
PRPF8-201ENST00000304992 MIS18AQ9NYP9 233 aa12.18□□□□□ -0.46
PRPF8-201ENST00000304992 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.18□□□□□ -0.462e-6■■■■■ 61.8
PRPF8-201ENST00000304992 CEBPZQ03701 1054 aaKnown RBP12.18□□□□□ -0.46
PRPF8-201ENST00000304992 NUDT16Q96DE0 195 aaKnown RBP12.17□□□□□ -0.46
PRPF8-201ENST00000304992 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
PRPF8-201ENST00000304992 SDF4Q9BRK5 362 aa12.17□□□□□ -0.46
PRPF8-201ENST00000304992 ARAP1Q96P48 1450 aa12.17□□□□□ -0.46
PRPF8-201ENST00000304992 BCAR3O75815 825 aa12.17□□□□□ -0.46
PRPF8-201ENST00000304992 CDK5RAP3Q96JB5 506 aa12.17□□□□□ -0.46
PRPF8-201ENST00000304992 SRCIN1Q9C0H9 1055 aa12.17□□□□□ -0.46
PRPF8-201ENST00000304992 STK3Q13188 491 aa12.17□□□□□ -0.46
PRPF8-201ENST00000304992 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
PRPF8-201ENST00000304992 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■□□□ 13.9
PRPF8-201ENST00000304992 OFD1O75665 1012 aa12.16□□□□□ -0.46
PRPF8-201ENST00000304992 ERC1Q8IUD2 1116 aa12.16□□□□□ -0.46
PRPF8-201ENST00000304992 CHMP5Q9NZZ3 219 aa12.16□□□□□ -0.46
PRPF8-201ENST00000304992 BRD4O60885 1362 aaPredicted RBP12.16□□□□□ -0.46
PRPF8-201ENST00000304992 NEK4P51957 841 aa12.16□□□□□ -0.46
PRPF8-201ENST00000304992 PLEKHH2Q8IVE3 1493 aa12.16□□□□□ -0.46
PRPF8-201ENST00000304992 PNISRQ8TF01 805 aaKnown RBP12.16□□□□□ -0.46
PRPF8-201ENST00000304992 PATL2C9JE40 543 aaKnown RBP12.15□□□□□ -0.46
PRPF8-201ENST00000304992 IBSPP21815 317 aaPredicted RBP12.15□□□□□ -0.46
PRPF8-201ENST00000304992 NBPF8Q3BBV2 869 aa12.15□□□□□ -0.46
PRPF8-201ENST00000304992 PDILTQ8N807 584 aa12.15□□□□□ -0.46
PRPF8-201ENST00000304992 NUP133Q8WUM0 1156 aa12.15□□□□□ -0.46
PRPF8-201ENST00000304992 KRT18P05783 430 aaKnown RBP12.15□□□□□ -0.46
PRPF8-201ENST00000304992 SYNJ1O43426 1573 aa12.15□□□□□ -0.46
PRPF8-201ENST00000304992 FOXO3O43524 673 aa12.15□□□□□ -0.46
PRPF8-201ENST00000304992 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.15□□□□□ -0.46
PRPF8-201ENST00000304992 HFM1A2PYH4 1435 aa12.15□□□□□ -0.46
PRPF8-201ENST00000304992 TROQ12816 1431 aaPredicted RBP12.15□□□□□ -0.46
PRPF8-201ENST00000304992 NUCB2P80303 420 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 TTLL5Q6EMB2 1281 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 OLFM4Q6UX06 510 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 NGLY1Q96IV0 654 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 PAF1Q8N7H5 531 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 PIBF1Q8WXW3 757 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
PRPF8-201ENST00000304992 KIAA1107Q9UPP5 1409 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 TNNT3P45378 269 aaPredicted RBP12.14□□□□□ -0.47
PRPF8-201ENST00000304992 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
PRPF8-201ENST00000304992 WWC2Q6AWC2 1192 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 MPRIPQ6WCQ1 1025 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 AACSQ86V21 672 aa12.14□□□□□ -0.47
PRPF8-201ENST00000304992 ZHX3Q9H4I2 956 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms