RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 PRAM1Q96QH2 718 aa15.06■□□□□ 0
COL4A3-201ENST00000304990 PPP1R1BQ9UD71 204 aaPredicted RBP15.06■□□□□ 0
COL4A3-201ENST00000304990 SPATA31A5Q5VU36 1347 aa15.06■□□□□ 0
COL4A3-201ENST00000304990 SPATA31A7Q8IWB4 1347 aa15.06■□□□□ 0
COL4A3-201ENST00000304990 DISP2A7MBM2 1401 aa15.06■□□□□ 0
COL4A3-201ENST00000304990 APBA3O96018 575 aa15.05■□□□□ -0
COL4A3-201ENST00000304990 THSD7AQ9UPZ6 1657 aa15.05■□□□□ -0
COL4A3-201ENST00000304990 TRPM3Q9HCF6 1732 aaPredicted RBP15.05■□□□□ -0
COL4A3-201ENST00000304990 ALS2Q96Q42 1657 aa15.04■□□□□ -0
COL4A3-201ENST00000304990 SPATA31E1Q6ZUB1 1445 aa15.04■□□□□ -0
COL4A3-201ENST00000304990 ANKARQ7Z5J8 1434 aa15.04■□□□□ -0
COL4A3-201ENST00000304990 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
COL4A3-201ENST00000304990 NBPF8Q3BBV2 869 aa15.04■□□□□ -0
COL4A3-201ENST00000304990 NBPF14Q5TI25 921 aa15.04■□□□□ -0
COL4A3-201ENST00000304990 FAM196AQ6ZSG2 479 aa15.04■□□□□ -0
COL4A3-201ENST00000304990 PRDM11Q9NQV5 511 aa15.04■□□□□ -0
COL4A3-201ENST00000304990 CAMKK2Q96RR4 588 aa15.02■□□□□ -0
COL4A3-201ENST00000304990 C14orf93Q9H972 538 aaKnown RBP15.02■□□□□ -0
COL4A3-201ENST00000304990 STRN4Q9NRL3 753 aa15.02■□□□□ -0
COL4A3-201ENST00000304990 PARD3Q8TEW0 1356 aa15.01□□□□□ -0.01
COL4A3-201ENST00000304990 PDE3BQ13370 1112 aa15.01□□□□□ -0.01
COL4A3-201ENST00000304990 CFAP70Q5T0N1 1121 aa15.01□□□□□ -0.01
COL4A3-201ENST00000304990 NGDNQ8NEJ9 315 aaKnown RBP15.01□□□□□ -0.01
COL4A3-201ENST00000304990 EIF3AQ14152 1382 aaKnown RBP15□□□□□ -0.01
COL4A3-201ENST00000304990 RREB1Q92766 1687 aa15□□□□□ -0.01
COL4A3-201ENST00000304990 USP35Q9P2H5 1018 aa15□□□□□ -0.01
COL4A3-201ENST00000304990 NUP188Q5SRE5 1749 aa15□□□□□ -0.01
COL4A3-201ENST00000304990 SPATA31A1Q5TZJ5 1347 aa14.99□□□□□ -0.01
COL4A3-201ENST00000304990 ACIN1Q9UKV3 1341 aaKnown RBP14.99□□□□□ -0.01
COL4A3-201ENST00000304990 EVA1CP58658 441 aa14.99□□□□□ -0.01
COL4A3-201ENST00000304990 HIRIP3Q9BW71 556 aaPredicted RBP14.99□□□□□ -0.01
COL4A3-201ENST00000304990 CRYBG1Q9Y4K1 1723 aa14.99□□□□□ -0.01
COL4A3-201ENST00000304990 MPHOSPH9Q99550 1183 aa14.98□□□□□ -0.01
COL4A3-201ENST00000304990 SPON1Q9HCB6 807 aa14.98□□□□□ -0.01
COL4A3-201ENST00000304990 MINK1Q8N4C8 1332 aaPredicted RBP14.97□□□□□ -0.01
COL4A3-201ENST00000304990 CHRNA2Q15822 529 aa14.97□□□□□ -0.01
COL4A3-201ENST00000304990 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
COL4A3-201ENST00000304990 KIAA0232Q92628 1395 aa14.96□□□□□ -0.02
COL4A3-201ENST00000304990 PHRF1Q9P1Y6 1649 aaKnown RBP14.95□□□□□ -0.02
COL4A3-201ENST00000304990 ITSN1Q15811 1721 aa14.95□□□□□ -0.02
COL4A3-201ENST00000304990 TRAK1Q9UPV9 953 aa14.95□□□□□ -0.02
COL4A3-201ENST00000304990 TULP4Q9NRJ4 1543 aa14.95□□□□□ -0.02
COL4A3-201ENST00000304990 KCNQ2O43526 872 aa14.94□□□□□ -0.02
COL4A3-201ENST00000304990 ZC3H6P61129 1189 aaKnown RBP14.94□□□□□ -0.02
COL4A3-201ENST00000304990 NINLQ9Y2I6 1382 aa14.93□□□□□ -0.02
COL4A3-201ENST00000304990 PRR36Q9H6K5 1346 aa14.92□□□□□ -0.02
COL4A3-201ENST00000304990 NUTM2GQ5VZR2 741 aa14.92□□□□□ -0.02
COL4A3-201ENST00000304990 CAMTA1Q9Y6Y1 1673 aa14.92□□□□□ -0.02
COL4A3-201ENST00000304990 WASLO00401 505 aaPredicted RBP14.91□□□□□ -0.02
COL4A3-201ENST00000304990 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
COL4A3-201ENST00000304990 SSH2Q76I76 1423 aa14.9□□□□□ -0.02
COL4A3-201ENST00000304990 ATP7BP35670 1465 aa14.89□□□□□ -0.03
COL4A3-201ENST00000304990 TCP11L2Q8N4U5 519 aa14.89□□□□□ -0.03
COL4A3-201ENST00000304990 C11orf95C9JLR9 678 aaPredicted RBP14.87□□□□□ -0.03
COL4A3-201ENST00000304990 LARP1Q6PKG0 1096 aaKnown RBP14.87□□□□□ -0.03
COL4A3-201ENST00000304990 ADGRB1O14514 1584 aa14.86□□□□□ -0.03
COL4A3-201ENST00000304990 NUDT16Q96DE0 195 aaKnown RBP14.86□□□□□ -0.03
COL4A3-201ENST00000304990 KDM2AQ9Y2K7 1162 aa14.86□□□□□ -0.03
COL4A3-201ENST00000304990 PARP4Q9UKK3 1724 aaKnown RBP14.86□□□□□ -0.03
COL4A3-201ENST00000304990 NRKQ7Z2Y5 1582 aa14.85□□□□□ -0.03
COL4A3-201ENST00000304990 ZBTB7CA1YPR0 619 aa14.85□□□□□ -0.03
COL4A3-201ENST00000304990 THRAP3Q9Y2W1 955 aaKnown RBP14.85□□□□□ -0.03
COL4A3-201ENST00000304990 RGPD3A6NKT7 1758 aaPredicted RBP14.85□□□□□ -0.03
COL4A3-201ENST00000304990 RGPD4Q7Z3J3 1758 aa14.85□□□□□ -0.03
COL4A3-201ENST00000304990 SENP3-EIF4A1A0A087X0R7 540 aa14.84□□□□□ -0.03
COL4A3-201ENST00000304990 ABTB2Q8N961 1025 aa14.84□□□□□ -0.03
COL4A3-201ENST00000304990 SBF2Q86WG5 1849 aa14.83□□□□□ -0.04
COL4A3-201ENST00000304990 BCL11BQ9C0K0 894 aaPredicted RBP14.83□□□□□ -0.04
COL4A3-201ENST00000304990 ARHGEF28Q8N1W1 1705 aaKnown RBP14.83□□□□□ -0.04
COL4A3-201ENST00000304990 OVOS2A0A0G2JMS6 1433 aa14.83□□□□□ -0.04
COL4A3-201ENST00000304990 OVOS2A0A0J9YW53 1432 aa14.83□□□□□ -0.04
COL4A3-201ENST00000304990 OVOS2Q6IE36 1432 aa14.83□□□□□ -0.04
COL4A3-201ENST00000304990 MYOM1P52179 1685 aa14.82□□□□□ -0.04
COL4A3-201ENST00000304990 LMO7Q8WWI1 1683 aa14.82□□□□□ -0.04
COL4A3-201ENST00000304990 ZNF784Q8NCA9 323 aaPredicted RBP14.82□□□□□ -0.04
COL4A3-201ENST00000304990 ACEP12821 1306 aa14.82□□□□□ -0.04
COL4A3-201ENST00000304990 CASZ1Q86V15 1759 aa14.82□□□□□ -0.04
COL4A3-201ENST00000304990 ZBTB7AO95365 584 aa14.81□□□□□ -0.04
COL4A3-201ENST00000304990 DCAF11Q8TEB1 546 aa14.81□□□□□ -0.04
COL4A3-201ENST00000304990 CDK19Q9BWU1 502 aa14.8□□□□□ -0.04
COL4A3-201ENST00000304990 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
COL4A3-201ENST00000304990 AKAP12Q02952 1782 aa14.8□□□□□ -0.04
COL4A3-201ENST00000304990 CHD4Q14839 1912 aa14.8□□□□□ -0.04
COL4A3-201ENST00000304990 PLSCR1O15162 318 aa14.79□□□□□ -0.04
COL4A3-201ENST00000304990 LRRC37A3O60309 1634 aa14.79□□□□□ -0.04
COL4A3-201ENST00000304990 CPDO75976 1380 aa14.79□□□□□ -0.04
COL4A3-201ENST00000304990 CRB1P82279 1406 aa14.79□□□□□ -0.04
COL4A3-201ENST00000304990 DDB1Q16531 1140 aa14.79□□□□□ -0.04
COL4A3-201ENST00000304990 NLRP13Q86W25 1043 aa14.79□□□□□ -0.04
COL4A3-201ENST00000304990 TOPAZ1Q8N9V7 1692 aa14.79□□□□□ -0.04
COL4A3-201ENST00000304990 ANO8Q9HCE9 1232 aaPredicted RBP14.79□□□□□ -0.04
COL4A3-201ENST00000304990 PEAK1Q9H792 1746 aa14.78□□□□□ -0.04
COL4A3-201ENST00000304990 COL5A2P05997 1499 aaPredicted RBP14.78□□□□□ -0.04
COL4A3-201ENST00000304990 STK32BQ9NY57 414 aa14.78□□□□□ -0.04
COL4A3-201ENST00000304990 POLR3AO14802 1390 aaPredicted RBP14.77□□□□□ -0.04
COL4A3-201ENST00000304990 GCP02774 474 aa14.77□□□□□ -0.05
COL4A3-201ENST00000304990 TOM1L2Q6ZVM7 507 aa14.77□□□□□ -0.05
COL4A3-201ENST00000304990 CCDC61Q9Y6R9 512 aa14.77□□□□□ -0.05
COL4A3-201ENST00000304990 WNK3Q9BYP7 1800 aa14.76□□□□□ -0.05
COL4A3-201ENST00000304990 PDGFDQ9GZP0 370 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms