RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 SRCAPQ6ZRS2 3230 aa9.8□□□□□ -0.84
ITGB1-201ENST00000302278 SLC4A1APQ9BWU0 796 aaKnown RBP9.8□□□□□ -0.84
ITGB1-201ENST00000302278 COL18A1P39060 1754 aa9.79□□□□□ -0.84
ITGB1-201ENST00000302278 CAMKK2Q96RR4 588 aa9.79□□□□□ -0.84
ITGB1-201ENST00000302278 USP54Q70EL1 1684 aa9.79□□□□□ -0.84
ITGB1-201ENST00000302278 QSER1Q2KHR3 1735 aa9.79□□□□□ -0.84
ITGB1-201ENST00000302278 BCL9O00512 1426 aa9.78□□□□□ -0.84
ITGB1-201ENST00000302278 AKAP12Q02952 1782 aa9.78□□□□□ -0.84
ITGB1-201ENST00000302278 POLR3AO14802 1390 aaPredicted RBP9.78□□□□□ -0.84
ITGB1-201ENST00000302278 CPDO75976 1380 aa9.77□□□□□ -0.84
ITGB1-201ENST00000302278 SPATA31A1Q5TZJ5 1347 aa9.77□□□□□ -0.84
ITGB1-201ENST00000302278 SLIT3O75094 1523 aa9.77□□□□□ -0.85
ITGB1-201ENST00000302278 NINLQ9Y2I6 1382 aa9.77□□□□□ -0.85
ITGB1-201ENST00000302278 BARGINQ6ZT62 677 aa9.77□□□□□ -0.85
ITGB1-201ENST00000302278 ABCC6O95255 1503 aa9.76□□□□□ -0.85
ITGB1-201ENST00000302278 TRPM1Q7Z4N2 1603 aa9.76□□□□□ -0.85
ITGB1-201ENST00000302278 PRR36Q9H6K5 1346 aa9.76□□□□□ -0.85
ITGB1-201ENST00000302278 ITGAEP38570 1179 aa9.76□□□□□ -0.85
ITGB1-201ENST00000302278 TMEM132EQ6IEE7 984 aa9.76□□□□□ -0.85
ITGB1-201ENST00000302278 BRD4O60885 1362 aaPredicted RBP9.75□□□□□ -0.85
ITGB1-201ENST00000302278 CAMTA1Q9Y6Y1 1673 aa9.75□□□□□ -0.85
ITGB1-201ENST00000302278 PAPPAQ13219 1627 aa9.75□□□□□ -0.85
ITGB1-201ENST00000302278 CABLES1Q8TDN4 633 aa9.75□□□□□ -0.85
ITGB1-201ENST00000302278 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
ITGB1-201ENST00000302278 MPHOSPH9Q99550 1183 aa9.75□□□□□ -0.85
ITGB1-201ENST00000302278 SSH2Q76I76 1423 aa9.75□□□□□ -0.85
ITGB1-201ENST00000302278 QRICH2Q9H0J4 1663 aa9.75□□□□□ -0.85
ITGB1-201ENST00000302278 BTG4Q9NY30 223 aa9.75□□□□□ -0.85
ITGB1-201ENST00000302278 STK26Q9P289 416 aa9.75□□□□□ -0.85
ITGB1-201ENST00000302278 GPRASP1Q5JY77 1395 aa9.75□□□□□ -0.85
ITGB1-201ENST00000302278 C11orf95C9JLR9 678 aaPredicted RBP9.74□□□□□ -0.85
ITGB1-201ENST00000302278 MYOM1P52179 1685 aa9.74□□□□□ -0.85
ITGB1-201ENST00000302278 FAM98CQ17RN3 349 aaKnown RBP9.74□□□□□ -0.85
ITGB1-201ENST00000302278 USP19O94966 1318 aa9.74□□□□□ -0.85
ITGB1-201ENST00000302278 FAM196AQ6ZSG2 479 aa9.74□□□□□ -0.85
ITGB1-201ENST00000302278 PRAM1Q96QH2 718 aa9.74□□□□□ -0.85
ITGB1-201ENST00000302278 EN1Q05925 392 aaPredicted RBP9.73□□□□□ -0.85
ITGB1-201ENST00000302278 CHD4Q14839 1912 aa9.73□□□□□ -0.85
ITGB1-201ENST00000302278 NHSQ6T4R5 1651 aa9.73□□□□□ -0.85
ITGB1-201ENST00000302278 PSDA5PKW4 1024 aaPredicted RBP9.73□□□□□ -0.85
ITGB1-201ENST00000302278 AATKQ6ZMQ8 1374 aa9.72□□□□□ -0.85
ITGB1-201ENST00000302278 THRAP3Q9Y2W1 955 aaKnown RBP9.72□□□□□ -0.85
ITGB1-201ENST00000302278 COL5A2P05997 1499 aaPredicted RBP9.72□□□□□ -0.85
ITGB1-201ENST00000302278 NUTM2FA1L443 756 aa9.71□□□□□ -0.85
ITGB1-201ENST00000302278 CFAP70Q5T0N1 1121 aa9.71□□□□□ -0.85
ITGB1-201ENST00000302278 WASLO00401 505 aaPredicted RBP9.71□□□□□ -0.85
ITGB1-201ENST00000302278 EZH2Q15910 746 aaKnown RBP9.71□□□□□ -0.85
ITGB1-201ENST00000302278 PIK3C2AO00443 1686 aa9.71□□□□□ -0.85
ITGB1-201ENST00000302278 R3HDM1Q15032 1099 aaKnown RBP9.71□□□□□ -0.86
ITGB1-201ENST00000302278 KIAA0232Q92628 1395 aa9.71□□□□□ -0.86
ITGB1-201ENST00000302278 HAP1P54257 671 aaPredicted RBP9.7□□□□□ -0.86
ITGB1-201ENST00000302278 OVOS2A0A0G2JMS6 1433 aa9.68□□□□□ -0.86
ITGB1-201ENST00000302278 OVOS2A0A0J9YW53 1432 aa9.68□□□□□ -0.86
ITGB1-201ENST00000302278 OVOS2Q6IE36 1432 aa9.68□□□□□ -0.86
ITGB1-201ENST00000302278 RGL3Q3MIN7 710 aa9.68□□□□□ -0.86
ITGB1-201ENST00000302278 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
ITGB1-201ENST00000302278 RGPD5Q99666 1765 aa9.68□□□□□ -0.86
ITGB1-201ENST00000302278 PLEKHG3A1L390 1219 aa9.68□□□□□ -0.86
ITGB1-201ENST00000302278 CRB1P82279 1406 aa9.67□□□□□ -0.86
ITGB1-201ENST00000302278 PMFBP1Q8TBY8 1022 aa9.67□□□□□ -0.86
ITGB1-201ENST00000302278 MAP3K5Q99683 1374 aa9.67□□□□□ -0.86
ITGB1-201ENST00000302278 MON2Q7Z3U7 1717 aa9.67□□□□□ -0.86
ITGB1-201ENST00000302278 PLSCR1O15162 318 aa9.67□□□□□ -0.86
ITGB1-201ENST00000302278 PRDM11Q9NQV5 511 aa9.65□□□□□ -0.86
ITGB1-201ENST00000302278 KCNQ2O43526 872 aa9.65□□□□□ -0.86
ITGB1-201ENST00000302278 TRIM37O94972 964 aa9.65□□□□□ -0.86
ITGB1-201ENST00000302278 FAM208AQ9UK61 1670 aaKnown RBP9.65□□□□□ -0.86
ITGB1-201ENST00000302278 NFAT5O94916 1531 aa9.65□□□□□ -0.86
ITGB1-201ENST00000302278 POGKQ9P215 609 aa9.65□□□□□ -0.86
ITGB1-201ENST00000302278 TCP11L2Q8N4U5 519 aa9.64□□□□□ -0.87
ITGB1-201ENST00000302278 APBA3O96018 575 aa9.64□□□□□ -0.87
ITGB1-201ENST00000302278 NBPF8Q3BBV2 869 aa9.64□□□□□ -0.87
ITGB1-201ENST00000302278 NBPF14Q5TI25 921 aa9.64□□□□□ -0.87
ITGB1-201ENST00000302278 TUBGCP6Q96RT7 1819 aa9.64□□□□□ -0.87
ITGB1-201ENST00000302278 YY1P25490 414 aa9.64□□□□□ -0.87
ITGB1-201ENST00000302278 SPON1Q9HCB6 807 aa9.63□□□□□ -0.87
ITGB1-201ENST00000302278 FAM182BQ5T319 152 aa9.63□□□□□ -0.87
ITGB1-201ENST00000302278 NUDT16Q96DE0 195 aaKnown RBP9.63□□□□□ -0.87
ITGB1-201ENST00000302278 BTAF1O14981 1849 aa9.63□□□□□ -0.87
ITGB1-201ENST00000302278 LY75O60449 1722 aa9.62□□□□□ -0.87
ITGB1-201ENST00000302278 USP6P35125 1406 aa9.62□□□□□ -0.87
ITGB1-201ENST00000302278 MINK1Q8N4C8 1332 aaPredicted RBP9.62□□□□□ -0.87
ITGB1-201ENST00000302278 LMOD2Q6P5Q4 547 aa9.61□□□□□ -0.87
ITGB1-201ENST00000302278 NGDNQ8NEJ9 315 aaKnown RBP9.61□□□□□ -0.87
ITGB1-201ENST00000302278 ACEP12821 1306 aa9.61□□□□□ -0.87
ITGB1-201ENST00000302278 SHANK3Q9BYB0 1731 aa9.61□□□□□ -0.87
ITGB1-201ENST00000302278 CPSF1Q10570 1443 aaKnown RBP9.61□□□□□ -0.87
ITGB1-201ENST00000302278 LTN1O94822 1766 aa9.61□□□□□ -0.87
ITGB1-201ENST00000302278 PTGER2P43116 358 aa9.61□□□□□ -0.87
ITGB1-201ENST00000302278 SGIP1Q9BQI5 828 aa9.61□□□□□ -0.87
ITGB1-201ENST00000302278 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
ITGB1-201ENST00000302278 A0A0G2JS52 829 aa9.6□□□□□ -0.87
ITGB1-201ENST00000302278 MYT1Q01538 1121 aa9.6□□□□□ -0.87
ITGB1-201ENST00000302278 LARP1Q6PKG0 1096 aaKnown RBP9.6□□□□□ -0.87
ITGB1-201ENST00000302278 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
ITGB1-201ENST00000302278 CCDC61Q9Y6R9 512 aa9.6□□□□□ -0.87
ITGB1-201ENST00000302278 RAB3GAP2Q9H2M9 1393 aa9.6□□□□□ -0.87
ITGB1-201ENST00000302278 TNS2Q63HR2 1409 aa9.6□□□□□ -0.87
ITGB1-201ENST00000302278 PPIP5K1Q6PFW1 1433 aa9.6□□□□□ -0.87
ITGB1-201ENST00000302278 CDCA7Q9BWT1 371 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms