RNA–Protein interactions for RNA: ENST00000288050.8

PDPR-201, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPR, Length 9,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-201ENST00000288050 TNNT1P13805 278 aa11.73□□□□□ -0.53
PDPR-201ENST00000288050 GIGYF2Q6Y7W6 1299 aaKnown RBP11.73□□□□□ -0.53
PDPR-201ENST00000288050 RBM10P98175 930 aaKnown RBP11.73□□□□□ -0.53
PDPR-201ENST00000288050 MPHOSPH9Q99550 1183 aa11.73□□□□□ -0.53
PDPR-201ENST00000288050 FMN1Q68DA7 1419 aa11.73□□□□□ -0.53
PDPR-201ENST00000288050 HOMER2Q9NSB8 354 aa11.72□□□□□ -0.53
PDPR-201ENST00000288050 SMARCA4P51532 1647 aa11.72□□□□□ -0.53
PDPR-201ENST00000288050 IKQ13123 557 aaPredicted RBP11.72□□□□□ -0.53
PDPR-201ENST00000288050 UBE4AQ14139 1066 aa11.72□□□□□ -0.53
PDPR-201ENST00000288050 NOL3O60936 208 aaKnown RBP11.72□□□□□ -0.53
PDPR-201ENST00000288050 GCOM1H8Y6P7 765 aaPredicted RBP11.72□□□□□ -0.53
PDPR-201ENST00000288050 MYZAPP0CAP1 466 aa11.72□□□□□ -0.53
PDPR-201ENST00000288050 MAP9Q49MG5 647 aa11.72□□□□□ -0.53
PDPR-201ENST00000288050 CLUAP1Q96AJ1 413 aa11.71□□□□□ -0.53
PDPR-201ENST00000288050 RALYLQ86SE5 291 aaKnown RBP11.71□□□□□ -0.53
PDPR-201ENST00000288050 CRACR2AQ9BSW2 395 aa11.71□□□□□ -0.53
PDPR-201ENST00000288050 PHF23Q9BUL5 403 aaPredicted RBP11.71□□□□□ -0.53
PDPR-201ENST00000288050 MRE11P49959 708 aa11.71□□□□□ -0.53
PDPR-201ENST00000288050 CCDC113Q9H0I3 377 aa11.71□□□□□ -0.53
PDPR-201ENST00000288050 DNAI2Q9GZS0 605 aa11.71□□□□□ -0.53
PDPR-201ENST00000288050 CCER2I3L3R5 266 aa11.71□□□□□ -0.53
PDPR-201ENST00000288050 ANKRD45Q5TZF3 282 aa11.71□□□□□ -0.53
PDPR-201ENST00000288050 CCDC18Q5T9S5 1454 aa11.71□□□□□ -0.54
PDPR-201ENST00000288050 TRAK1Q9UPV9 953 aa11.71□□□□□ -0.54
PDPR-201ENST00000288050 EPB41L2O43491 1005 aaKnown RBP11.71□□□□□ -0.54
PDPR-201ENST00000288050 POLR3GO15318 223 aaPredicted RBP11.71□□□□□ -0.54
PDPR-201ENST00000288050 RRP9O43818 475 aaKnown RBP11.7□□□□□ -0.54
PDPR-201ENST00000288050 CENPQQ7L2Z9 268 aaPredicted RBP11.7□□□□□ -0.54
PDPR-201ENST00000288050 CCDC160A6NGH7 325 aa11.7□□□□□ -0.54
PDPR-201ENST00000288050 C9orf78Q9NZ63 289 aaPredicted RBP11.7□□□□□ -0.54
PDPR-201ENST00000288050 COMMD10Q9Y6G5 202 aa11.7□□□□□ -0.54
PDPR-201ENST00000288050 C1orf141Q5JVX7 400 aa11.7□□□□□ -0.54
PDPR-201ENST00000288050 TSPY26PQ9H489 355 aa11.7□□□□□ -0.54
PDPR-201ENST00000288050 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
PDPR-201ENST00000288050 DZIP1LQ8IYY4 767 aaKnown RBP11.7□□□□□ -0.54
PDPR-201ENST00000288050 SWAP70Q9UH65 585 aa11.7□□□□□ -0.54
PDPR-201ENST00000288050 IFIT2P09913 472 aaKnown RBP11.69□□□□□ -0.54
PDPR-201ENST00000288050 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
PDPR-201ENST00000288050 TERF2IPQ9NYB0 399 aa11.69□□□□□ -0.54
PDPR-201ENST00000288050 CALCOCO1Q9P1Z2 691 aa11.69□□□□□ -0.54
PDPR-201ENST00000288050 PABPN1LA6NDY0 278 aaKnown RBP11.69□□□□□ -0.54
PDPR-201ENST00000288050 CCDC6Q16204 474 aa11.69□□□□□ -0.54
PDPR-201ENST00000288050 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
PDPR-201ENST00000288050 TMCO5BA8MYB1 307 aa11.69□□□□□ -0.54
PDPR-201ENST00000288050 MCM3P25205 808 aa11.69□□□□□ -0.54
PDPR-201ENST00000288050 CETN2P41208 172 aa11.69□□□□□ -0.54
PDPR-201ENST00000288050 SERPINC1P01008 464 aa11.69□□□□□ -0.54
PDPR-201ENST00000288050 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.69□□□□□ -0.54
PDPR-201ENST00000288050 RNF187Q5TA31 235 aaPredicted RBP11.69□□□□□ -0.54
PDPR-201ENST00000288050 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 DACH1Q9UI36 760 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 UQCRHLA0A096LP55 91 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 UQCRHP07919 91 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 SSR1P43307 286 aaKnown RBP11.68□□□□□ -0.54
PDPR-201ENST00000288050 PHLDB1Q86UU1 1377 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 NGEFQ8N5V2 710 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 TAF4BQ92750 862 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 SUDS3Q9H7L9 328 aaPredicted RBP11.68□□□□□ -0.54
PDPR-201ENST00000288050 ROCK1Q13464 1354 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 TCHPQ9BT92 498 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 SPECC1LQ69YQ0 1117 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 CCDC148Q8NFR7 591 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 SART3Q15020 963 aaKnown RBP11.68□□□□□ -0.54
PDPR-201ENST00000288050 RAB3IL1Q8TBN0 382 aa11.68□□□□□ -0.54
PDPR-201ENST00000288050 RAB3GAP2Q9H2M9 1393 aa11.67□□□□□ -0.54
PDPR-201ENST00000288050 IFFO1Q0D2I5 559 aa11.67□□□□□ -0.54
PDPR-201ENST00000288050 TANGO6Q9C0B7 1094 aa11.67□□□□□ -0.54
PDPR-201ENST00000288050 HOOK3Q86VS8 718 aa11.67□□□□□ -0.54
PDPR-201ENST00000288050 DNAJC2Q99543 621 aaKnown RBP11.67□□□□□ -0.54
PDPR-201ENST00000288050 GBP3Q9H0R5 595 aa11.67□□□□□ -0.54
PDPR-201ENST00000288050 KIAA1328Q86T90 577 aa11.67□□□□□ -0.54
PDPR-201ENST00000288050 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
PDPR-201ENST00000288050 CBFA2T2O43439 604 aa11.66□□□□□ -0.54
PDPR-201ENST00000288050 NINLQ9Y2I6 1382 aa11.66□□□□□ -0.54
PDPR-201ENST00000288050 SPC24Q8NBT2 197 aa11.66□□□□□ -0.54
PDPR-201ENST00000288050 SERPINA10Q9UK55 444 aa11.66□□□□□ -0.54
PDPR-201ENST00000288050 FMNL2Q96PY5 1086 aa11.66□□□□□ -0.54
PDPR-201ENST00000288050 GSTTP1A0A1W2PQM5 241 aa11.66□□□□□ -0.54
PDPR-201ENST00000288050 RAPGEF2Q9Y4G8 1499 aa11.66□□□□□ -0.54
PDPR-201ENST00000288050 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
PDPR-201ENST00000288050 JPH4Q96JJ6 628 aa11.65□□□□□ -0.54
PDPR-201ENST00000288050 CPSF2Q9P2I0 782 aaKnown RBP11.65□□□□□ -0.54
PDPR-201ENST00000288050 SREK1Q8WXA9 508 aaKnown RBP11.65□□□□□ -0.54
PDPR-201ENST00000288050 BCL2L13Q9BXK5 485 aa11.65□□□□□ -0.54
PDPR-201ENST00000288050 FEZ2Q9UHY8 353 aaPredicted RBP11.65□□□□□ -0.54
PDPR-201ENST00000288050 MATR3P43243 847 aaKnown RBP eCLIP11.65□□□□□ -0.542e-9■■■□□ 18.9
PDPR-201ENST00000288050 PDCL2Q8N4E4 241 aa11.65□□□□□ -0.54
PDPR-201ENST00000288050 RPUSD2Q8IZ73 545 aaKnown RBP11.65□□□□□ -0.54
PDPR-201ENST00000288050 FAM177A1Q8N128 213 aaPredicted RBP11.65□□□□□ -0.54
PDPR-201ENST00000288050 ZNF396Q96N95 335 aaPredicted RBP11.65□□□□□ -0.54
PDPR-201ENST00000288050 GOPCQ9HD26 462 aa11.65□□□□□ -0.54
PDPR-201ENST00000288050 RNF214Q8ND24 703 aa11.65□□□□□ -0.55
PDPR-201ENST00000288050 RRP7AQ9Y3A4 280 aaKnown RBP11.65□□□□□ -0.55
PDPR-201ENST00000288050 MBD3O95983 291 aa11.64□□□□□ -0.55
PDPR-201ENST00000288050 SLC4A3P48751 1232 aa11.64□□□□□ -0.55
PDPR-201ENST00000288050 PSMA5P28066 241 aa11.64□□□□□ -0.55
PDPR-201ENST00000288050 JMYQ8N9B5 988 aa11.64□□□□□ -0.55
PDPR-201ENST00000288050 PAIP2Q9BPZ3 127 aaKnown RBP11.64□□□□□ -0.55
PDPR-201ENST00000288050 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms