RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SAMD1Q6SPF0 538 aaPredicted RBP4.85□□□□□ -1.63
SCN3A-201ENST00000283254 DACH1Q9UI36 760 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 SYNJ2O15056 1496 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 GAPVD1Q14C86 1478 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 ELL2O00472 640 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-201ENST00000283254 CCDC158Q5M9N0 1113 aa4.84□□□□□ -1.63
SCN3A-201ENST00000283254 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-201ENST00000283254 ANKRD1Q15327 319 aa4.84□□□□□ -1.63
SCN3A-201ENST00000283254 PRDM11Q9NQV5 511 aa4.84□□□□□ -1.63
SCN3A-201ENST00000283254 RBM19Q9Y4C8 960 aaKnown RBP4.84□□□□□ -1.63
SCN3A-201ENST00000283254 PATL2C9JE40 543 aaKnown RBP4.84□□□□□ -1.63
SCN3A-201ENST00000283254 CETN2P41208 172 aa4.84□□□□□ -1.63
SCN3A-201ENST00000283254 TNIP1Q15025 636 aa4.84□□□□□ -1.63
SCN3A-201ENST00000283254 SOGA3Q5TF21 947 aa4.84□□□□□ -1.63
SCN3A-201ENST00000283254 FEZ1Q99689 392 aa4.84□□□□□ -1.63
SCN3A-201ENST00000283254 SPG7Q9UQ90 795 aa4.84□□□□□ -1.63
SCN3A-201ENST00000283254 KANK4Q5T7N3 995 aaPredicted RBP4.84□□□□□ -1.64
SCN3A-201ENST00000283254 MPHOSPH8Q99549 860 aa4.84□□□□□ -1.64
SCN3A-201ENST00000283254 ANKRD50Q9ULJ7 1429 aa4.84□□□□□ -1.64
SCN3A-201ENST00000283254 RRP1P56182 461 aaKnown RBP4.84□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC57Q2TAC2 916 aa4.84□□□□□ -1.64
SCN3A-201ENST00000283254 PPP4R3AQ6IN85 833 aa4.84□□□□□ -1.64
SCN3A-201ENST00000283254 SLC52A1Q9NWF4 448 aa4.84□□□□□ -1.64
SCN3A-201ENST00000283254 NOL7Q9UMY1 257 aaKnown RBP4.84□□□□□ -1.64
SCN3A-201ENST00000283254 WASF1Q92558 559 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 CTNNA3Q9UI47 895 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 NEBLO76041 1014 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 IFT57Q9NWB7 429 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 FBXO3Q9UK99 471 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 HMGN5P82970 282 aaKnown RBP4.83□□□□□ -1.64
SCN3A-201ENST00000283254 STK38Q15208 465 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 CAVIN1Q6NZI2 390 aaKnown RBP4.83□□□□□ -1.64
SCN3A-201ENST00000283254 ZNF592Q92610 1267 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 ZNF428Q96B54 188 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 FOXD4L1Q9NU39 408 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 H0YHG0 523 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 FOXD4L5Q5VV16 416 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-201ENST00000283254 FOXD4L4Q8WXT5 416 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-201ENST00000283254 ABTB2Q8N961 1025 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 PRKRIP1Q9H875 184 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-201ENST00000283254 INCENPQ9NQS7 918 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 MROH2BQ7Z745 1585 aa4.83□□□□□ -1.64
SCN3A-201ENST00000283254 ZNF652Q9Y2D9 606 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 CCT4P50991 539 aaKnown RBP4.82□□□□□ -1.64
SCN3A-201ENST00000283254 HSP90AA2PQ14568 343 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-201ENST00000283254 ARHGAP5Q13017 1502 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 MPHOSPH10O00566 681 aaKnown RBP4.82□□□□□ -1.64
SCN3A-201ENST00000283254 ERLIN1O75477 346 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 COG6Q9Y2V7 657 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 CNNM1Q9NRU3 951 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 PPP1R1BQ9UD71 204 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-201ENST00000283254 ATAD2Q6PL18 1390 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 ANKRD30BQ9BXX2 1392 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 FYB1O15117 783 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 BCL2L13Q9BXK5 485 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC39Q9UFE4 941 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 VPS36Q86VN1 386 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 UBAC1Q9BSL1 405 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 ZNF692Q9BU19 519 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-201ENST00000283254 FGD6Q6ZV73 1430 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 KIF20AO95235 890 aa4.82□□□□□ -1.64
SCN3A-201ENST00000283254 KRT32Q14532 448 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 AMER1Q5JTC6 1135 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-201ENST00000283254 ZNF530Q6P9A1 599 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-201ENST00000283254 ANKLE2Q86XL3 938 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 SLF2Q8IX21 1173 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 ARID3AQ99856 593 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 BICRAQ9NZM4 1560 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 APAF1O14727 1248 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 SEPT7Q16181 437 aaKnown RBP4.81□□□□□ -1.64
SCN3A-201ENST00000283254 ESCO1Q5FWF5 840 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 MPHOSPH6Q99547 160 aaKnown RBP4.81□□□□□ -1.64
SCN3A-201ENST00000283254 SRCIN1Q9C0H9 1055 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 ATAD2BQ9ULI0 1458 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 BRD4O60885 1362 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-201ENST00000283254 MAP7D2Q96T17 732 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 RBM42Q9BTD8 480 aaKnown RBP4.81□□□□□ -1.64
SCN3A-201ENST00000283254 AEBP1Q8IUX7 1158 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 RPGRIP1LQ68CZ1 1315 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 SMC2O95347 1197 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 IGHMBP2P38935 993 aaKnown RBP4.81□□□□□ -1.64
SCN3A-201ENST00000283254 FAM13BQ9NYF5 915 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 GRIN2BQ13224 1484 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 AIMP1Q12904 312 aaKnown RBP4.81□□□□□ -1.64
SCN3A-201ENST00000283254 TTC39AQ5SRH9 613 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 TOM1L2Q6ZVM7 507 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 TXNDC2Q86VQ3 553 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 PHAXQ9H814 394 aaKnown RBP4.81□□□□□ -1.64
SCN3A-201ENST00000283254 CBFA2T2O43439 604 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 SMARCA4P51532 1647 aa4.81□□□□□ -1.64
SCN3A-201ENST00000283254 PDE4AP27815 886 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 ATF7IPQ6VMQ6 1270 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 CEP57L1Q8IYX8 460 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 RAB34Q9BZG1 259 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 EHMT1Q9H9B1 1298 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 SURF6O75683 361 aaKnown RBP4.8□□□□□ -1.64
SCN3A-201ENST00000283254 HDGFL1Q5TGJ6 251 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 PPFIBP1Q86W92 1011 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 RBM5P52756 815 aaKnown RBP eCLIP4.8□□□□□ -1.64
SCN3A-201ENST00000283254 ZNF771Q7L3S4 317 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms