RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 RGPD1P0DJD0 1748 aa17.85■□□□□ 0.45
SPC25-201ENST00000282074 DISP2A7MBM2 1401 aa17.85■□□□□ 0.45
SPC25-201ENST00000282074 ANKARQ7Z5J8 1434 aa17.85■□□□□ 0.45
SPC25-201ENST00000282074 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
SPC25-201ENST00000282074 ABCA3Q99758 1704 aa17.84■□□□□ 0.45
SPC25-201ENST00000282074 EZH2Q15910 746 aaKnown RBP17.83■□□□□ 0.45
SPC25-201ENST00000282074 FAM196AQ6ZSG2 479 aa17.83■□□□□ 0.45
SPC25-201ENST00000282074 COL14A1Q05707 1796 aaKnown RBP17.82■□□□□ 0.44
SPC25-201ENST00000282074 CAMKK2Q96RR4 588 aa17.81■□□□□ 0.44
SPC25-201ENST00000282074 PRDM11Q9NQV5 511 aa17.81■□□□□ 0.44
SPC25-201ENST00000282074 NRAPQ86VF7 1730 aa17.81■□□□□ 0.44
SPC25-201ENST00000282074 TRIM37O94972 964 aa17.8■□□□□ 0.44
SPC25-201ENST00000282074 ACIN1Q9UKV3 1341 aaKnown RBP17.8■□□□□ 0.44
SPC25-201ENST00000282074 EIF3AQ14152 1382 aaKnown RBP17.8■□□□□ 0.44
SPC25-201ENST00000282074 PAK3O75914 559 aaPredicted RBP17.79■□□□□ 0.44
SPC25-201ENST00000282074 APBA3O96018 575 aa17.79■□□□□ 0.44
SPC25-201ENST00000282074 YY1P25490 414 aa17.79■□□□□ 0.44
SPC25-201ENST00000282074 PARD3Q8TEW0 1356 aa17.79■□□□□ 0.44
SPC25-201ENST00000282074 NGDNQ8NEJ9 315 aaKnown RBP17.79■□□□□ 0.44
SPC25-201ENST00000282074 NBPF8Q3BBV2 869 aa17.78■□□□□ 0.44
SPC25-201ENST00000282074 NBPF14Q5TI25 921 aa17.78■□□□□ 0.44
SPC25-201ENST00000282074 SPATA31A1Q5TZJ5 1347 aa17.77■□□□□ 0.44
SPC25-201ENST00000282074 HIRIP3Q9BW71 556 aaPredicted RBP17.77■□□□□ 0.43
SPC25-201ENST00000282074 DLC1Q96QB1 1528 aa17.76■□□□□ 0.43
SPC25-201ENST00000282074 ADGRB2O60241 1585 aa17.76■□□□□ 0.43
SPC25-201ENST00000282074 THSD7AQ9UPZ6 1657 aa17.75■□□□□ 0.43
SPC25-201ENST00000282074 TRPM3Q9HCF6 1732 aaPredicted RBP17.75■□□□□ 0.43
SPC25-201ENST00000282074 PDE3BQ13370 1112 aa17.75■□□□□ 0.43
SPC25-201ENST00000282074 STRN4Q9NRL3 753 aa17.75■□□□□ 0.43
SPC25-201ENST00000282074 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
SPC25-201ENST00000282074 ALS2Q96Q42 1657 aa17.74■□□□□ 0.43
SPC25-201ENST00000282074 WASLO00401 505 aaPredicted RBP17.74■□□□□ 0.43
SPC25-201ENST00000282074 MINK1Q8N4C8 1332 aaPredicted RBP17.74■□□□□ 0.43
SPC25-201ENST00000282074 TNS1Q9HBL0 1735 aaKnown RBP17.74■□□□□ 0.43
SPC25-201ENST00000282074 EVA1CP58658 441 aa17.73■□□□□ 0.43
SPC25-201ENST00000282074 PPP4R3CPQ6ZMV5 832 aa17.73■□□□□ 0.43
SPC25-201ENST00000282074 PPP1R1BQ9UD71 204 aaPredicted RBP17.73■□□□□ 0.43
SPC25-201ENST00000282074 KIAA0232Q92628 1395 aa17.72■□□□□ 0.43
SPC25-201ENST00000282074 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
SPC25-201ENST00000282074 CHRNA2Q15822 529 aa17.72■□□□□ 0.43
SPC25-201ENST00000282074 BARGINQ6ZT62 677 aa17.71■□□□□ 0.43
SPC25-201ENST00000282074 SPON1Q9HCB6 807 aa17.71■□□□□ 0.43
SPC25-201ENST00000282074 USP35Q9P2H5 1018 aa17.71■□□□□ 0.43
SPC25-201ENST00000282074 TULP4Q9NRJ4 1543 aa17.7■□□□□ 0.42
SPC25-201ENST00000282074 ZC3H6P61129 1189 aaKnown RBP17.69■□□□□ 0.42
SPC25-201ENST00000282074 C11orf95C9JLR9 678 aaPredicted RBP17.67■□□□□ 0.42
SPC25-201ENST00000282074 KCNQ2O43526 872 aa17.67■□□□□ 0.42
SPC25-201ENST00000282074 TCP11L2Q8N4U5 519 aa17.66■□□□□ 0.42
SPC25-201ENST00000282074 NUDT16Q96DE0 195 aaKnown RBP17.66■□□□□ 0.42
SPC25-201ENST00000282074 CRYBG1Q9Y4K1 1723 aa17.65■□□□□ 0.42
SPC25-201ENST00000282074 ADGRB1O14514 1584 aa17.65■□□□□ 0.42
SPC25-201ENST00000282074 THRAP3Q9Y2W1 955 aaKnown RBP17.65■□□□□ 0.42
SPC25-201ENST00000282074 NINLQ9Y2I6 1382 aa17.64■□□□□ 0.42
SPC25-201ENST00000282074 SSH2Q76I76 1423 aa17.64■□□□□ 0.41
SPC25-201ENST00000282074 NUTM2GQ5VZR2 741 aa17.64■□□□□ 0.41
SPC25-201ENST00000282074 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
SPC25-201ENST00000282074 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
SPC25-201ENST00000282074 STAC3Q96MF2 364 aa17.63■□□□□ 0.41
SPC25-201ENST00000282074 ATP7BP35670 1465 aa17.63■□□□□ 0.41
SPC25-201ENST00000282074 LARP1Q6PKG0 1096 aaKnown RBP17.62■□□□□ 0.41
SPC25-201ENST00000282074 RREB1Q92766 1687 aa17.62■□□□□ 0.41
SPC25-201ENST00000282074 DCAF11Q8TEB1 546 aa17.61■□□□□ 0.41
SPC25-201ENST00000282074 NUP188Q5SRE5 1749 aa17.6■□□□□ 0.41
SPC25-201ENST00000282074 ABTB2Q8N961 1025 aa17.6■□□□□ 0.41
SPC25-201ENST00000282074 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
SPC25-201ENST00000282074 CDK19Q9BWU1 502 aa17.59■□□□□ 0.41
SPC25-201ENST00000282074 CCDC61Q9Y6R9 512 aa17.59■□□□□ 0.41
SPC25-201ENST00000282074 ACEP12821 1306 aa17.59■□□□□ 0.41
SPC25-201ENST00000282074 PHRF1Q9P1Y6 1649 aaKnown RBP17.58■□□□□ 0.41
SPC25-201ENST00000282074 CPDO75976 1380 aa17.58■□□□□ 0.41
SPC25-201ENST00000282074 PLSCR1O15162 318 aa17.58■□□□□ 0.4
SPC25-201ENST00000282074 ITSN1Q15811 1721 aa17.58■□□□□ 0.4
SPC25-201ENST00000282074 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
SPC25-201ENST00000282074 CAMTA1Q9Y6Y1 1673 aa17.57■□□□□ 0.4
SPC25-201ENST00000282074 POLR3AO14802 1390 aaPredicted RBP17.57■□□□□ 0.4
SPC25-201ENST00000282074 PLEKHG3A1L390 1219 aa17.56■□□□□ 0.4
SPC25-201ENST00000282074 GCP02774 474 aa17.55■□□□□ 0.4
SPC25-201ENST00000282074 OVOS2A0A0G2JMS6 1433 aa17.54■□□□□ 0.4
SPC25-201ENST00000282074 OVOS2A0A0J9YW53 1432 aa17.54■□□□□ 0.4
SPC25-201ENST00000282074 OVOS2Q6IE36 1432 aa17.54■□□□□ 0.4
SPC25-201ENST00000282074 USP19O94966 1318 aa17.53■□□□□ 0.4
SPC25-201ENST00000282074 DDB1Q16531 1140 aa17.53■□□□□ 0.4
SPC25-201ENST00000282074 BCL11BQ9C0K0 894 aaPredicted RBP17.53■□□□□ 0.4
SPC25-201ENST00000282074 CRB1P82279 1406 aa17.51■□□□□ 0.39
SPC25-201ENST00000282074 NRKQ7Z2Y5 1582 aa17.51■□□□□ 0.39
SPC25-201ENST00000282074 COL5A2P05997 1499 aaPredicted RBP17.5■□□□□ 0.39
SPC25-201ENST00000282074 ZNF784Q8NCA9 323 aaPredicted RBP17.5■□□□□ 0.39
SPC25-201ENST00000282074 LMO7Q8WWI1 1683 aa17.5■□□□□ 0.39
SPC25-201ENST00000282074 ANO8Q9HCE9 1232 aaPredicted RBP17.5■□□□□ 0.39
SPC25-201ENST00000282074 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
SPC25-201ENST00000282074 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
SPC25-201ENST00000282074 BRD4O60885 1362 aaPredicted RBP17.48■□□□□ 0.39
SPC25-201ENST00000282074 ZBTB7AO95365 584 aa17.48■□□□□ 0.39
SPC25-201ENST00000282074 TOM1L2Q6ZVM7 507 aa17.48■□□□□ 0.39
SPC25-201ENST00000282074 CDCA7Q9BWT1 371 aaPredicted RBP17.48■□□□□ 0.39
SPC25-201ENST00000282074 ARHGEF28Q8N1W1 1705 aaKnown RBP17.48■□□□□ 0.39
SPC25-201ENST00000282074 RGPD3A6NKT7 1758 aaPredicted RBP17.47■□□□□ 0.39
SPC25-201ENST00000282074 RGPD4Q7Z3J3 1758 aa17.47■□□□□ 0.39
SPC25-201ENST00000282074 STK32BQ9NY57 414 aa17.47■□□□□ 0.39
SPC25-201ENST00000282074 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms