RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 AK7Q96M32 723 aa12.29□□□□□ -0.44
PHF3-201ENST00000262043 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
PHF3-201ENST00000262043 GAS2L2Q8NHY3 880 aa12.29□□□□□ -0.44
PHF3-201ENST00000262043 TRAK2O60296 914 aa12.28□□□□□ -0.44
PHF3-201ENST00000262043 PRAM1Q96QH2 718 aa12.28□□□□□ -0.44
PHF3-201ENST00000262043 GPRASP1Q5JY77 1395 aa12.28□□□□□ -0.44
PHF3-201ENST00000262043 CCDC39Q9UFE4 941 aa12.28□□□□□ -0.44
PHF3-201ENST00000262043 GNAI2P04899 355 aa12.28□□□□□ -0.44
PHF3-201ENST00000262043 NEK4P51957 841 aa12.28□□□□□ -0.44
PHF3-201ENST00000262043 TBC1D2BQ9UPU7 963 aa12.28□□□□□ -0.44
PHF3-201ENST00000262043 GNAI3P08754 354 aa12.28□□□□□ -0.44
PHF3-201ENST00000262043 WDR97A6NE52 1622 aa12.28□□□□□ -0.44
PHF3-201ENST00000262043 EXOSC9Q06265 439 aaKnown RBP12.27□□□□□ -0.44
PHF3-201ENST00000262043 SART3Q15020 963 aaKnown RBP12.27□□□□□ -0.44
PHF3-201ENST00000262043 TWISTNBQ3B726 338 aaPredicted RBP12.27□□□□□ -0.44
PHF3-201ENST00000262043 CEBPZQ03701 1054 aaKnown RBP12.27□□□□□ -0.45
PHF3-201ENST00000262043 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
PHF3-201ENST00000262043 ARGLU1Q9NWB6 273 aaPredicted RBP12.27□□□□□ -0.45
PHF3-201ENST00000262043 C9orf84Q5VXU9 1444 aa12.27□□□□□ -0.45
PHF3-201ENST00000262043 TSR2Q969E8 191 aaKnown RBP12.27□□□□□ -0.45
PHF3-201ENST00000262043 PDZRN3Q9UPQ7 1066 aa12.27□□□□□ -0.45
PHF3-201ENST00000262043 LETM1O95202 739 aaPredicted RBP12.26□□□□□ -0.45
PHF3-201ENST00000262043 AFAP1Q8N556 730 aa12.26□□□□□ -0.45
PHF3-201ENST00000262043 EFCAB5A4FU69 1503 aa12.26□□□□□ -0.45
PHF3-201ENST00000262043 HIP1O00291 1037 aa12.26□□□□□ -0.45
PHF3-201ENST00000262043 CAGE1Q8TC20 777 aa12.26□□□□□ -0.45
PHF3-201ENST00000262043 SCAPERQ9BY12 1400 aa12.26□□□□□ -0.45
PHF3-201ENST00000262043 KINO60870 393 aaKnown RBP12.26□□□□□ -0.45
PHF3-201ENST00000262043 R3HCC1Q9Y3T6 440 aaKnown RBP12.26□□□□□ -0.45
PHF3-201ENST00000262043 SMC2O95347 1197 aa12.26□□□□□ -0.45
PHF3-201ENST00000262043 TRIM5Q9C035 493 aa12.26□□□□□ -0.45
PHF3-201ENST00000262043 BCAR3O75815 825 aa12.26□□□□□ -0.45
PHF3-201ENST00000262043 MAP4K4O95819 1239 aaPredicted RBP12.26□□□□□ -0.45
PHF3-201ENST00000262043 TTC39AQ5SRH9 613 aa12.26□□□□□ -0.45
PHF3-201ENST00000262043 TIAM1Q13009 1591 aa12.26□□□□□ -0.45
PHF3-201ENST00000262043 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
PHF3-201ENST00000262043 MRE11P49959 708 aa12.25□□□□□ -0.45
PHF3-201ENST00000262043 GRIN2BQ13224 1484 aa12.25□□□□□ -0.45
PHF3-201ENST00000262043 ZFYVE27Q5T4F4 411 aa12.25□□□□□ -0.45
PHF3-201ENST00000262043 PLEKHO1Q53GL0 409 aaPredicted RBP12.25□□□□□ -0.45
PHF3-201ENST00000262043 ARAP1Q96P48 1450 aa12.25□□□□□ -0.45
PHF3-201ENST00000262043 OFD1O75665 1012 aa12.25□□□□□ -0.45
PHF3-201ENST00000262043 CDK19Q9BWU1 502 aa12.25□□□□□ -0.45
PHF3-201ENST00000262043 ATP2B1P20020 1258 aa12.25□□□□□ -0.45
PHF3-201ENST00000262043 CNNM1Q9NRU3 951 aa12.25□□□□□ -0.45
PHF3-201ENST00000262043 TOP2BQ02880 1626 aa12.25□□□□□ -0.45
PHF3-201ENST00000262043 NBPF1Q3BBV0 1214 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 HSP90AB2PQ58FF8 381 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 STK11IPQ8N1F8 1099 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 TSPY26PQ9H489 355 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 STRN4Q9NRL3 753 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
PHF3-201ENST00000262043 ERC1Q8IUD2 1116 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 MCM2P49736 904 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 SIL1Q9H173 461 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 BRPF1P55201 1214 aaPredicted RBP12.24□□□□□ -0.45
PHF3-201ENST00000262043 GCC1Q96CN9 775 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 FMNL2Q96PY5 1086 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 ACBD3Q9H3P7 528 aa12.24□□□□□ -0.45
PHF3-201ENST00000262043 SLC3A2P08195 630 aaKnown RBP12.23□□□□□ -0.45
PHF3-201ENST00000262043 TXNDC2Q86VQ3 553 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 PDCP20941 246 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 FIBPO43427 364 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 MYL6BP14649 208 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 HSP90B2PQ58FF3 399 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 SPC24Q8NBT2 197 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 SLC12A5Q9H2X9 1139 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 SULT6B1Q6IMI4 303 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 CDK5RAP3Q96JB5 506 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 KIAA1107Q9UPP5 1409 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 STK3Q13188 491 aa12.23□□□□□ -0.45
PHF3-201ENST00000262043 ERBINQ96RT1 1412 aa12.22□□□□□ -0.45
PHF3-201ENST00000262043 RABEP1Q15276 862 aa12.22□□□□□ -0.45
PHF3-201ENST00000262043 LRRCC1Q9C099 1032 aa12.22□□□□□ -0.45
PHF3-201ENST00000262043 CCDC158Q5M9N0 1113 aa12.22□□□□□ -0.45
PHF3-201ENST00000262043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.22□□□□□ -0.454e-6■■■■■ 40.2
PHF3-201ENST00000262043 HDGFL1Q5TGJ6 251 aa12.22□□□□□ -0.45
PHF3-201ENST00000262043 CFAP65Q6ZU64 1925 aaKnown RBP12.22□□□□□ -0.45
PHF3-201ENST00000262043 TXLNAP40222 546 aa12.21□□□□□ -0.45
PHF3-201ENST00000262043 ZNF396Q96N95 335 aaPredicted RBP12.21□□□□□ -0.45
PHF3-201ENST00000262043 MAGEC2Q9UBF1 373 aaPredicted RBP12.21□□□□□ -0.45
PHF3-201ENST00000262043 CCDC173Q0VFZ6 552 aa12.21□□□□□ -0.45
PHF3-201ENST00000262043 MBD3O95983 291 aa12.21□□□□□ -0.45
PHF3-201ENST00000262043 CDR1P51861 262 aa12.21□□□□□ -0.45
PHF3-201ENST00000262043 PDE3AQ14432 1141 aa12.21□□□□□ -0.45
PHF3-201ENST00000262043 PRG4Q92954 1404 aaPredicted RBP12.21□□□□□ -0.46
PHF3-201ENST00000262043 CCT4P50991 539 aaKnown RBP12.2□□□□□ -0.46
PHF3-201ENST00000262043 SKIDA1Q1XH10 827 aa12.2□□□□□ -0.46
PHF3-201ENST00000262043 PTPN23Q9H3S7 1636 aa12.2□□□□□ -0.46
PHF3-201ENST00000262043 CABP4P57796 275 aa12.2□□□□□ -0.46
PHF3-201ENST00000262043 CABP1Q9NZU7 370 aa12.2□□□□□ -0.46
PHF3-201ENST00000262043 FILIP1LQ4L180 1135 aa12.2□□□□□ -0.46
PHF3-201ENST00000262043 SMARCE1Q969G3 411 aa12.2□□□□□ -0.46
PHF3-201ENST00000262043 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.2□□□□□ -0.46
PHF3-201ENST00000262043 ATP2B2Q01814 1243 aa12.2□□□□□ -0.46
PHF3-201ENST00000262043 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
PHF3-201ENST00000262043 PHF23Q9BUL5 403 aaPredicted RBP12.2□□□□□ -0.46
PHF3-201ENST00000262043 CYP46A1Q9Y6A2 500 aa12.19□□□□□ -0.46
PHF3-201ENST00000262043 CC2D2AQ9P2K1 1620 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms