RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 AXDND1Q5T1B0 1012 aaPredicted RBP17.1■□□□□ 0.33
CUX2-201ENST00000261726 RSPH4AQ5TD94 716 aa17.1■□□□□ 0.33
CUX2-201ENST00000261726 NLRP2Q9NX02 1062 aa17.1■□□□□ 0.33
CUX2-201ENST00000261726 USP47Q96K76 1375 aa17.1■□□□□ 0.33
CUX2-201ENST00000261726 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
CUX2-201ENST00000261726 SART3Q15020 963 aaKnown RBP17.1■□□□□ 0.33
CUX2-201ENST00000261726 RUNDC1Q96C34 613 aa17.1■□□□□ 0.33
CUX2-201ENST00000261726 PANK1Q8TE04 598 aa17.1■□□□□ 0.33
CUX2-201ENST00000261726 SMARCE1Q969G3 411 aa17.09■□□□□ 0.33
CUX2-201ENST00000261726 CWC15Q9P013 229 aaKnown RBP17.09■□□□□ 0.33
CUX2-201ENST00000261726 CDC45O75419 566 aa17.09■□□□□ 0.33
CUX2-201ENST00000261726 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
CUX2-201ENST00000261726 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
CUX2-201ENST00000261726 GNAI1P63096 354 aa17.09■□□□□ 0.33
CUX2-201ENST00000261726 TBC1D2BQ9UPU7 963 aa17.09■□□□□ 0.33
CUX2-201ENST00000261726 FILIP1LQ4L180 1135 aa17.08■□□□□ 0.33
CUX2-201ENST00000261726 CAVIN1Q6NZI2 390 aaKnown RBP17.08■□□□□ 0.32
CUX2-201ENST00000261726 PPP1R1BQ9UD71 204 aaPredicted RBP17.07■□□□□ 0.32
CUX2-201ENST00000261726 KINO60870 393 aaKnown RBP17.07■□□□□ 0.32
CUX2-201ENST00000261726 SPC24Q8NBT2 197 aa17.07■□□□□ 0.32
CUX2-201ENST00000261726 ZNF428Q96B54 188 aa17.07■□□□□ 0.32
CUX2-201ENST00000261726 TXLNAP40222 546 aa17.06■□□□□ 0.32
CUX2-201ENST00000261726 ZHX3Q9H4I2 956 aa17.06■□□□□ 0.32
CUX2-201ENST00000261726 ATF3P18847 181 aa17.05■□□□□ 0.32
CUX2-201ENST00000261726 PDCL3Q9H2J4 239 aa17.05■□□□□ 0.32
CUX2-201ENST00000261726 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
CUX2-201ENST00000261726 SEPT7Q16181 437 aaKnown RBP17.05■□□□□ 0.32
CUX2-201ENST00000261726 ZRSR2Q15696 482 aaKnown RBP17.04■□□□□ 0.32
CUX2-201ENST00000261726 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
CUX2-201ENST00000261726 ENOX2Q16206 610 aaKnown RBP17.04■□□□□ 0.32
CUX2-201ENST00000261726 TSPY26PQ9H489 355 aa17.04■□□□□ 0.32
CUX2-201ENST00000261726 CT47B1P0C2W7 299 aaPredicted RBP17.04■□□□□ 0.32
CUX2-201ENST00000261726 SLC3A2P08195 630 aaKnown RBP17.03■□□□□ 0.32
CUX2-201ENST00000261726 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
CUX2-201ENST00000261726 KIF6Q6ZMV9 814 aa17.03■□□□□ 0.32
CUX2-201ENST00000261726 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
CUX2-201ENST00000261726 SURF6O75683 361 aaKnown RBP17.03■□□□□ 0.32
CUX2-201ENST00000261726 NFKBIBQ15653 356 aa17.03■□□□□ 0.32
CUX2-201ENST00000261726 TTC39AQ5SRH9 613 aa17.03■□□□□ 0.32
CUX2-201ENST00000261726 LEKR1Q6ZMV7 388 aa17.03■□□□□ 0.32
CUX2-201ENST00000261726 GGNBP2Q9H3C7 697 aa17.03■□□□□ 0.32
CUX2-201ENST00000261726 PRPF40AO75400 957 aaKnown RBP17.02■□□□□ 0.32
CUX2-201ENST00000261726 ERLIN2O94905 339 aa17.02■□□□□ 0.32
CUX2-201ENST00000261726 TANGO6Q9C0B7 1094 aa17.02■□□□□ 0.32
CUX2-201ENST00000261726 FIBPO43427 364 aa17.02■□□□□ 0.31
CUX2-201ENST00000261726 LETM1O95202 739 aaPredicted RBP17.02■□□□□ 0.31
CUX2-201ENST00000261726 STK3Q13188 491 aa17.02■□□□□ 0.31
CUX2-201ENST00000261726 ARAP1Q96P48 1450 aa17.02■□□□□ 0.31
CUX2-201ENST00000261726 CLASRPQ8N2M8 674 aaKnown RBP17.01■□□□□ 0.31
CUX2-201ENST00000261726 STK38Q15208 465 aa17.01■□□□□ 0.31
CUX2-201ENST00000261726 SERPINC1P01008 464 aa17.01■□□□□ 0.31
CUX2-201ENST00000261726 MRE11P49959 708 aa17.01■□□□□ 0.31
CUX2-201ENST00000261726 DEF6Q9H4E7 631 aa17.01■□□□□ 0.31
CUX2-201ENST00000261726 NEK4P51957 841 aa17.01■□□□□ 0.31
CUX2-201ENST00000261726 CENPHQ9H3R5 247 aa17■□□□□ 0.31
CUX2-201ENST00000261726 GOLGA6L10A6NI86 522 aa17■□□□□ 0.31
CUX2-201ENST00000261726 CNNM1Q9NRU3 951 aa17■□□□□ 0.31
CUX2-201ENST00000261726 ZNHIT6Q9NWK9 470 aaKnown RBP17■□□□□ 0.31
CUX2-201ENST00000261726 RBM10P98175 930 aaKnown RBP17■□□□□ 0.31
CUX2-201ENST00000261726 C1orf115Q9H7X2 142 aa17■□□□□ 0.31
CUX2-201ENST00000261726 ZNF396Q96N95 335 aaPredicted RBP17■□□□□ 0.31
CUX2-201ENST00000261726 CCDC181Q5TID7 509 aa16.99■□□□□ 0.31
CUX2-201ENST00000261726 TAX1BP1Q86VP1 789 aa16.99■□□□□ 0.31
CUX2-201ENST00000261726 CABP2Q9NPB3 220 aa16.99■□□□□ 0.31
CUX2-201ENST00000261726 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
CUX2-201ENST00000261726 CCP110O43303 1012 aa16.99■□□□□ 0.31
CUX2-201ENST00000261726 TRAK2O60296 914 aa16.99■□□□□ 0.31
CUX2-201ENST00000261726 FAM177A1Q8N128 213 aaPredicted RBP16.99■□□□□ 0.31
CUX2-201ENST00000261726 SEPT11Q9NVA2 429 aaKnown RBP16.99■□□□□ 0.31
CUX2-201ENST00000261726 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
CUX2-201ENST00000261726 IBSPP21815 317 aaPredicted RBP16.98■□□□□ 0.31
CUX2-201ENST00000261726 MPNDQ8N594 471 aa16.98■□□□□ 0.31
CUX2-201ENST00000261726 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
CUX2-201ENST00000261726 FAM193AP78312 1265 aa16.97■□□□□ 0.31
CUX2-201ENST00000261726 ANKRD18AQ8IVF6 992 aa16.97■□□□□ 0.31
CUX2-201ENST00000261726 CCDC30Q5VVM6 783 aa16.97■□□□□ 0.31
CUX2-201ENST00000261726 PPFIBP1Q86W92 1011 aa16.96■□□□□ 0.31
CUX2-201ENST00000261726 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.31
CUX2-201ENST00000261726 CCDC66A2RUB6 948 aa16.96■□□□□ 0.31
CUX2-201ENST00000261726 NLRP6P59044 892 aa16.96■□□□□ 0.31
CUX2-201ENST00000261726 IFT140Q96RY7 1462 aa16.96■□□□□ 0.31
CUX2-201ENST00000261726 CCDC158Q5M9N0 1113 aa16.96■□□□□ 0.3
CUX2-201ENST00000261726 CYB5RLQ6IPT4 315 aa16.96■□□□□ 0.3
CUX2-201ENST00000261726 RBM5P52756 815 aaKnown RBP eCLIP16.95■□□□□ 0.3
CUX2-201ENST00000261726 NUP133Q8WUM0 1156 aa16.95■□□□□ 0.3
CUX2-201ENST00000261726 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
CUX2-201ENST00000261726 SIL1Q9H173 461 aa16.95■□□□□ 0.3
CUX2-201ENST00000261726 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
CUX2-201ENST00000261726 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
CUX2-201ENST00000261726 MATR3P43243 847 aaKnown RBP eCLIP16.95■□□□□ 0.3
CUX2-201ENST00000261726 CCDC97Q96F63 343 aaPredicted RBP16.95■□□□□ 0.3
CUX2-201ENST00000261726 KIAA0754O94854 1291 aa16.94■□□□□ 0.3
CUX2-201ENST00000261726 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
CUX2-201ENST00000261726 CCDC69A6NI79 296 aa16.94■□□□□ 0.3
CUX2-201ENST00000261726 KIF7Q2M1P5 1343 aa16.94■□□□□ 0.3
CUX2-201ENST00000261726 HIP1O00291 1037 aa16.93■□□□□ 0.3
CUX2-201ENST00000261726 MBD3O95983 291 aa16.93■□□□□ 0.3
CUX2-201ENST00000261726 GNAI3P08754 354 aa16.93■□□□□ 0.3
CUX2-201ENST00000261726 ME1P48163 572 aa16.93■□□□□ 0.3
CUX2-201ENST00000261726 STIM1Q13586 685 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms