RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 SYCE3A1L190 88 aa16.44■□□□□ 0.22
TUBGCP4-201ENST00000260383 IGSF3O75054 1194 aa16.44■□□□□ 0.22
TUBGCP4-201ENST00000260383 NUCB1Q02818 461 aa16.44■□□□□ 0.22
TUBGCP4-201ENST00000260383 CDCA8Q53HL2 280 aa16.44■□□□□ 0.22
TUBGCP4-201ENST00000260383 DNTTIP2Q5QJE6 756 aaKnown RBP16.44■□□□□ 0.22
TUBGCP4-201ENST00000260383 RUNDC1Q96C34 613 aa16.44■□□□□ 0.22
TUBGCP4-201ENST00000260383 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
TUBGCP4-201ENST00000260383 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
TUBGCP4-201ENST00000260383 TMEM63CQ9P1W3 806 aa16.43■□□□□ 0.22
TUBGCP4-201ENST00000260383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.43■□□□□ 0.22
TUBGCP4-201ENST00000260383 JPH4Q96JJ6 628 aa16.43■□□□□ 0.22
TUBGCP4-201ENST00000260383 TMEM51Q9NW97 253 aa16.43■□□□□ 0.22
TUBGCP4-201ENST00000260383 MYOM1P52179 1685 aa16.42■□□□□ 0.22
TUBGCP4-201ENST00000260383 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
TUBGCP4-201ENST00000260383 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
TUBGCP4-201ENST00000260383 CYP2E1P05181 493 aaPredicted RBP16.42■□□□□ 0.22
TUBGCP4-201ENST00000260383 LRSAM1Q6UWE0 723 aa16.42■□□□□ 0.22
TUBGCP4-201ENST00000260383 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
TUBGCP4-201ENST00000260383 KIAA2012Q0VF49 1180 aa16.41■□□□□ 0.22
TUBGCP4-201ENST00000260383 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
TUBGCP4-201ENST00000260383 CHD1O14646 1710 aa16.41■□□□□ 0.22
TUBGCP4-201ENST00000260383 LETM1O95202 739 aaPredicted RBP16.41■□□□□ 0.22
TUBGCP4-201ENST00000260383 BMP2KLQ5H9B9 411 aa16.41■□□□□ 0.22
TUBGCP4-201ENST00000260383 CHD1LQ86WJ1 897 aa16.41■□□□□ 0.22
TUBGCP4-201ENST00000260383 CHMP4BQ9H444 224 aaKnown RBP16.41■□□□□ 0.22
TUBGCP4-201ENST00000260383 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
TUBGCP4-201ENST00000260383 NAP1L2Q9ULW6 460 aaPredicted RBP16.41■□□□□ 0.22
TUBGCP4-201ENST00000260383 RNF17Q9BXT8 1623 aaKnown RBP16.41■□□□□ 0.22
TUBGCP4-201ENST00000260383 ZNF830Q96NB3 372 aaPredicted RBP16.4■□□□□ 0.22
TUBGCP4-201ENST00000260383 DDX19BQ9UMR2 479 aa16.4■□□□□ 0.22
TUBGCP4-201ENST00000260383 POLR3AO14802 1390 aaPredicted RBP16.4■□□□□ 0.22
TUBGCP4-201ENST00000260383 PTMAP06454 111 aaKnown RBP16.4■□□□□ 0.22
TUBGCP4-201ENST00000260383 C17orf53Q8N3J3 647 aaPredicted RBP16.39■□□□□ 0.21
TUBGCP4-201ENST00000260383 TMEM57Q8N5G2 664 aa16.39■□□□□ 0.21
TUBGCP4-201ENST00000260383 ZBTB40Q9NUA8 1239 aa16.39■□□□□ 0.21
TUBGCP4-201ENST00000260383 PLB1Q6P1J6 1458 aa16.39■□□□□ 0.21
TUBGCP4-201ENST00000260383 NUCB2P80303 420 aa16.38■□□□□ 0.21
TUBGCP4-201ENST00000260383 IQSEC2Q5JU85 1478 aa16.38■□□□□ 0.21
TUBGCP4-201ENST00000260383 SSH1Q8WYL5 1049 aa16.38■□□□□ 0.21
TUBGCP4-201ENST00000260383 ZBTB22O15209 634 aa16.37■□□□□ 0.21
TUBGCP4-201ENST00000260383 GTF2F1P35269 517 aaKnown RBP eCLIP16.37■□□□□ 0.21
TUBGCP4-201ENST00000260383 ATF7IPQ6VMQ6 1270 aa16.37■□□□□ 0.21
TUBGCP4-201ENST00000260383 NOB1Q9ULX3 412 aaKnown RBP16.37■□□□□ 0.21
TUBGCP4-201ENST00000260383 ZDHHC9Q9Y397 364 aa16.37■□□□□ 0.21
TUBGCP4-201ENST00000260383 CARMIL2Q6F5E8 1435 aa16.37■□□□□ 0.21
TUBGCP4-201ENST00000260383 EXOSC9Q06265 439 aaKnown RBP16.36■□□□□ 0.21
TUBGCP4-201ENST00000260383 ZGPATQ8N5A5 531 aaKnown RBP16.36■□□□□ 0.21
TUBGCP4-201ENST00000260383 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
TUBGCP4-201ENST00000260383 VGLL3A8MV65 326 aa16.36■□□□□ 0.21
TUBGCP4-201ENST00000260383 BCL2L12Q9HB09 334 aa16.36■□□□□ 0.21
TUBGCP4-201ENST00000260383 IQGAP1P46940 1657 aa16.36■□□□□ 0.21
TUBGCP4-201ENST00000260383 ANKRD45Q5TZF3 282 aa16.35■□□□□ 0.21
TUBGCP4-201ENST00000260383 HMGN5P82970 282 aaKnown RBP16.35■□□□□ 0.21
TUBGCP4-201ENST00000260383 KANK1Q14678 1352 aa16.35■□□□□ 0.21
TUBGCP4-201ENST00000260383 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
TUBGCP4-201ENST00000260383 SHPRHQ149N8 1683 aa16.35■□□□□ 0.21
TUBGCP4-201ENST00000260383 FOXD4L5Q5VV16 416 aaPredicted RBP16.34■□□□□ 0.21
TUBGCP4-201ENST00000260383 FOXD4L4Q8WXT5 416 aaPredicted RBP16.34■□□□□ 0.21
TUBGCP4-201ENST00000260383 KIF3AQ9Y496 699 aa16.34■□□□□ 0.21
TUBGCP4-201ENST00000260383 CCDC27Q2M243 656 aa16.33■□□□□ 0.21
TUBGCP4-201ENST00000260383 PIBF1Q8WXW3 757 aa16.33■□□□□ 0.21
TUBGCP4-201ENST00000260383 SCAF11Q99590 1463 aaKnown RBP16.33■□□□□ 0.21
TUBGCP4-201ENST00000260383 U2AF2P26368 475 aaKnown RBP eCLIP16.33■□□□□ 0.26e-7■■■□□ 18.1
TUBGCP4-201ENST00000260383 TTC12Q9H892 705 aaPredicted RBP16.32■□□□□ 0.2
TUBGCP4-201ENST00000260383 CGNQ9P2M7 1197 aaKnown RBP16.32■□□□□ 0.2
TUBGCP4-201ENST00000260383 PDCL2Q8N4E4 241 aa16.32■□□□□ 0.2
TUBGCP4-201ENST00000260383 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
TUBGCP4-201ENST00000260383 PDIA4P13667 645 aaKnown RBP16.31■□□□□ 0.2
TUBGCP4-201ENST00000260383 CFAP74Q9C0B2 1584 aa16.3■□□□□ 0.2
TUBGCP4-201ENST00000260383 RABEP1Q15276 862 aa16.3■□□□□ 0.2
TUBGCP4-201ENST00000260383 MADDQ8WXG6 1647 aa16.3■□□□□ 0.2
TUBGCP4-201ENST00000260383 PLEKHD1A6NEE1 506 aa16.3■□□□□ 0.2
TUBGCP4-201ENST00000260383 CEP152O94986 1710 aa16.29■□□□□ 0.2
TUBGCP4-201ENST00000260383 C1orf115Q9H7X2 142 aa16.29■□□□□ 0.2
TUBGCP4-201ENST00000260383 TSPY26PQ9H489 355 aa16.29■□□□□ 0.2
TUBGCP4-201ENST00000260383 MTHFSP49914 203 aa16.28■□□□□ 0.2
TUBGCP4-201ENST00000260383 KDM5AP29375 1690 aaKnown RBP16.28■□□□□ 0.2
TUBGCP4-201ENST00000260383 CDC45O75419 566 aa16.27■□□□□ 0.2
TUBGCP4-201ENST00000260383 FKBP5Q13451 457 aaPredicted RBP16.27■□□□□ 0.2
TUBGCP4-201ENST00000260383 GSPT1P15170 499 aaKnown RBP16.27■□□□□ 0.19
TUBGCP4-201ENST00000260383 IPO4Q8TEX9 1081 aaKnown RBP16.27■□□□□ 0.19
TUBGCP4-201ENST00000260383 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.19
TUBGCP4-201ENST00000260383 ABCA8O94911 1581 aa16.26■□□□□ 0.19
TUBGCP4-201ENST00000260383 PPIP5K1Q6PFW1 1433 aa16.26■□□□□ 0.19
TUBGCP4-201ENST00000260383 ZNF771Q7L3S4 317 aaPredicted RBP16.26■□□□□ 0.19
TUBGCP4-201ENST00000260383 PLCD3Q8N3E9 789 aa16.26■□□□□ 0.19
TUBGCP4-201ENST00000260383 USP25Q9UHP3 1055 aa16.26■□□□□ 0.19
TUBGCP4-201ENST00000260383 ERVK-7P63135 1459 aa16.26■□□□□ 0.19
TUBGCP4-201ENST00000260383 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
TUBGCP4-201ENST00000260383 RIOK3O14730 519 aaKnown RBP16.25■□□□□ 0.19
TUBGCP4-201ENST00000260383 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
TUBGCP4-201ENST00000260383 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.19
TUBGCP4-201ENST00000260383 SPTLC3Q9NUV7 552 aa16.25■□□□□ 0.19
TUBGCP4-201ENST00000260383 NOS1P29475 1434 aa16.25■□□□□ 0.19
TUBGCP4-201ENST00000260383 ANKRD7Q92527 254 aa16.25■□□□□ 0.19
TUBGCP4-201ENST00000260383 USP26Q9BXU7 913 aa16.25■□□□□ 0.19
TUBGCP4-201ENST00000260383 ARHGEF5Q12774 1597 aa16.25■□□□□ 0.19
TUBGCP4-201ENST00000260383 UNC13BO14795 1591 aa16.24■□□□□ 0.19
TUBGCP4-201ENST00000260383 ATP10AO60312 1499 aa16.24■□□□□ 0.19
TUBGCP4-201ENST00000260383 MBD3O95983 291 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms