RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 IRX3P78415 501 aaPredicted RBP15.72■□□□□ 0.11
PCDHGA3-201ENST00000253812 KIF7Q2M1P5 1343 aa15.72■□□□□ 0.11
PCDHGA3-201ENST00000253812 DYNC1I1O14576 645 aa15.72■□□□□ 0.11
PCDHGA3-201ENST00000253812 SMARCE1Q969G3 411 aa15.72■□□□□ 0.11
PCDHGA3-201ENST00000253812 LTV1Q96GA3 475 aaPredicted RBP15.72■□□□□ 0.11
PCDHGA3-201ENST00000253812 AMPHP49418 695 aa15.72■□□□□ 0.11
PCDHGA3-201ENST00000253812 APAF1O14727 1248 aa15.71■□□□□ 0.11
PCDHGA3-201ENST00000253812 PDCP20941 246 aa15.71■□□□□ 0.11
PCDHGA3-201ENST00000253812 IPO4Q8TEX9 1081 aaKnown RBP15.71■□□□□ 0.11
PCDHGA3-201ENST00000253812 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.11
PCDHGA3-201ENST00000253812 NEFHP12036 1026 aa15.71■□□□□ 0.1
PCDHGA3-201ENST00000253812 LRRFIP1Q32MZ4 808 aaKnown RBP15.71■□□□□ 0.1
PCDHGA3-201ENST00000253812 KIAA0586Q9BVV6 1533 aa15.71■□□□□ 0.1
PCDHGA3-201ENST00000253812 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
PCDHGA3-201ENST00000253812 API5Q9BZZ5 524 aaKnown RBP15.7■□□□□ 0.1
PCDHGA3-201ENST00000253812 TTLL5Q6EMB2 1281 aa15.7■□□□□ 0.1
PCDHGA3-201ENST00000253812 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
PCDHGA3-201ENST00000253812 MPNDQ8N594 471 aa15.7■□□□□ 0.1
PCDHGA3-201ENST00000253812 CCDC7Q96M83 1385 aa15.69■□□□□ 0.1
PCDHGA3-201ENST00000253812 MIA2Q96PC5 1412 aa15.69■□□□□ 0.1
PCDHGA3-201ENST00000253812 TRERF1Q96PN7 1200 aa15.69■□□□□ 0.1
PCDHGA3-201ENST00000253812 GBP3Q9H0R5 595 aa15.69■□□□□ 0.1
PCDHGA3-201ENST00000253812 EHBP1L1Q8N3D4 1523 aa15.69■□□□□ 0.1
PCDHGA3-201ENST00000253812 TMEM132EQ6IEE7 984 aa15.69■□□□□ 0.1
PCDHGA3-201ENST00000253812 PEG3Q9GZU2 1588 aa15.68■□□□□ 0.1
PCDHGA3-201ENST00000253812 SHTN1A0MZ66 631 aa15.68■□□□□ 0.1
PCDHGA3-201ENST00000253812 MCM5P33992 734 aa15.68■□□□□ 0.1
PCDHGA3-201ENST00000253812 FILIP1LQ4L180 1135 aa15.68■□□□□ 0.1
PCDHGA3-201ENST00000253812 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
PCDHGA3-201ENST00000253812 OFD1O75665 1012 aa15.68■□□□□ 0.1
PCDHGA3-201ENST00000253812 CLCN1P35523 988 aa15.68■□□□□ 0.1
PCDHGA3-201ENST00000253812 LRRCC1Q9C099 1032 aa15.68■□□□□ 0.1
PCDHGA3-201ENST00000253812 C9orf84Q5VXU9 1444 aa15.67■□□□□ 0.1
PCDHGA3-201ENST00000253812 FIBPO43427 364 aa15.67■□□□□ 0.1
PCDHGA3-201ENST00000253812 ERLIN2O94905 339 aa15.67■□□□□ 0.1
PCDHGA3-201ENST00000253812 GTF2A1P52655 376 aaPredicted RBP15.67■□□□□ 0.1
PCDHGA3-201ENST00000253812 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
PCDHGA3-201ENST00000253812 FMNL2Q96PY5 1086 aa15.66■□□□□ 0.1
PCDHGA3-201ENST00000253812 NEK4P51957 841 aa15.66■□□□□ 0.1
PCDHGA3-201ENST00000253812 CFAP70Q5T0N1 1121 aa15.66■□□□□ 0.1
PCDHGA3-201ENST00000253812 ROCK1Q13464 1354 aa15.66■□□□□ 0.1
PCDHGA3-201ENST00000253812 ELL2O00472 640 aaPredicted RBP15.66■□□□□ 0.1
PCDHGA3-201ENST00000253812 NBPF1Q3BBV0 1214 aa15.66■□□□□ 0.1
PCDHGA3-201ENST00000253812 PPP4R3BQ5MIZ7 849 aa15.66■□□□□ 0.1
PCDHGA3-201ENST00000253812 STAC3Q96MF2 364 aa15.66■□□□□ 0.1
PCDHGA3-201ENST00000253812 WASHC2AQ641Q2 1341 aa15.65■□□□□ 0.1
PCDHGA3-201ENST00000253812 SAFBQ15424 915 aaKnown RBP eCLIP15.65■□□□□ 0.1
PCDHGA3-201ENST00000253812 COG3Q96JB2 828 aa15.65■□□□□ 0.1
PCDHGA3-201ENST00000253812 SCAPERQ9BY12 1400 aa15.65■□□□□ 0.1
PCDHGA3-201ENST00000253812 GTF2F1P35269 517 aaKnown RBP eCLIP15.65■□□□□ 0.1
PCDHGA3-201ENST00000253812 XPCQ01831 940 aaPredicted RBP15.65■□□□□ 0.1
PCDHGA3-201ENST00000253812 FILIP1Q7Z7B0 1213 aa15.65■□□□□ 0.1
PCDHGA3-201ENST00000253812 K7ELQ4 463 aaPredicted RBP15.65■□□□□ 0.1
PCDHGA3-201ENST00000253812 HFM1A2PYH4 1435 aa15.65■□□□□ 0.1
PCDHGA3-201ENST00000253812 EPRSP07814 1512 aaKnown RBP15.64■□□□□ 0.09
PCDHGA3-201ENST00000253812 WDR33Q9C0J8 1336 aaKnown RBP15.64■□□□□ 0.09
PCDHGA3-201ENST00000253812 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.64■□□□□ 0.09
PCDHGA3-201ENST00000253812 KIF18AQ8NI77 898 aa15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 ZNF330Q9Y3S2 320 aaPredicted RBP15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 CCDC27Q2M243 656 aa15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 NBPF8Q3BBV2 869 aa15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 HECW1Q76N89 1606 aa15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 PTPN14Q15678 1187 aa15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 CT47A1Q5JQC4 288 aaPredicted RBP15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 CRACR2AQ9BSW2 395 aa15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 GTPBP4Q9BZE4 634 aaKnown RBP15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 PRIMPOLQ96LW4 560 aa15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 TNMDQ9H2S6 317 aa15.63■□□□□ 0.09
PCDHGA3-201ENST00000253812 RAPGEF3O95398 923 aa15.62■□□□□ 0.09
PCDHGA3-201ENST00000253812 TRDNQ13061 729 aa15.62■□□□□ 0.09
PCDHGA3-201ENST00000253812 IQCEQ6IPM2 695 aa15.62■□□□□ 0.09
PCDHGA3-201ENST00000253812 SERPINC1P01008 464 aa15.62■□□□□ 0.09
PCDHGA3-201ENST00000253812 PIP4K2AP48426 406 aaPredicted RBP15.62■□□□□ 0.09
PCDHGA3-201ENST00000253812 IFIT2P09913 472 aaKnown RBP15.61■□□□□ 0.09
PCDHGA3-201ENST00000253812 PANK1Q8TE04 598 aa15.61■□□□□ 0.09
PCDHGA3-201ENST00000253812 PSMA5P28066 241 aa15.61■□□□□ 0.09
PCDHGA3-201ENST00000253812 MNAT1P51948 309 aa15.61■□□□□ 0.09
PCDHGA3-201ENST00000253812 ODF2Q5BJF6 829 aa15.61■□□□□ 0.09
PCDHGA3-201ENST00000253812 PDZRN3Q9UPQ7 1066 aa15.61■□□□□ 0.09
PCDHGA3-201ENST00000253812 IQGAP2Q13576 1575 aa15.61■□□□□ 0.09
PCDHGA3-201ENST00000253812 HSP90AB2PQ58FF8 381 aa15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 NOL10Q9BSC4 688 aaKnown RBP15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 ZNHIT6Q9NWK9 470 aaKnown RBP15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 DAPK1P53355 1430 aa15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 CTR9Q6PD62 1173 aa15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 MICALCLQ6ZW33 695 aa15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 DNAAF4Q8WXU2 420 aa15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 RBM25P49756 843 aaKnown RBP15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 VPS53Q5VIR6 699 aa15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 PPFIBP1Q86W92 1011 aa15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 WWC1Q8IX03 1113 aa15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 FAM177A1Q8N128 213 aaPredicted RBP15.6■□□□□ 0.09
PCDHGA3-201ENST00000253812 CBFA2T2O43439 604 aa15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 CCDC181Q5TID7 509 aa15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 PLB1Q6P1J6 1458 aa15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 KIAA1107Q9UPP5 1409 aa15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 ERC2O15083 957 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms