RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 ZNF771Q7L3S4 317 aaPredicted RBP8.65□□□□□ -1.02
CPS1-201ENST00000233072 SYNJ1O43426 1573 aa8.65□□□□□ -1.02
CPS1-201ENST00000233072 PDE3AQ14432 1141 aa8.65□□□□□ -1.03
CPS1-201ENST00000233072 MNS1Q8NEH6 495 aa8.65□□□□□ -1.03
CPS1-201ENST00000233072 ARAP1Q96P48 1450 aa8.65□□□□□ -1.03
CPS1-201ENST00000233072 ERBINQ96RT1 1412 aa8.65□□□□□ -1.03
CPS1-201ENST00000233072 MRE11P49959 708 aa8.65□□□□□ -1.03
CPS1-201ENST00000233072 PDE4CQ08493 712 aa8.65□□□□□ -1.03
CPS1-201ENST00000233072 WASHC4Q2M389 1173 aa8.65□□□□□ -1.03
CPS1-201ENST00000233072 FSD1Q9BTV5 496 aa8.64□□□□□ -1.03
CPS1-201ENST00000233072 KIF14Q15058 1648 aa8.64□□□□□ -1.03
CPS1-201ENST00000233072 RAD21O60216 631 aa8.64□□□□□ -1.03
CPS1-201ENST00000233072 CLASRPQ8N2M8 674 aaKnown RBP8.64□□□□□ -1.03
CPS1-201ENST00000233072 SRCIN1Q9C0H9 1055 aa8.64□□□□□ -1.03
CPS1-201ENST00000233072 WDR63Q8IWG1 891 aa8.64□□□□□ -1.03
CPS1-201ENST00000233072 ANKRD30BQ9BXX2 1392 aa8.64□□□□□ -1.03
CPS1-201ENST00000233072 DCTN1Q14203 1278 aa8.64□□□□□ -1.03
CPS1-201ENST00000233072 FILIP1LQ4L180 1135 aa8.64□□□□□ -1.03
CPS1-201ENST00000233072 ODF2Q5BJF6 829 aa8.64□□□□□ -1.03
CPS1-201ENST00000233072 CT47A1Q5JQC4 288 aaPredicted RBP8.64□□□□□ -1.03
CPS1-201ENST00000233072 ZNF592Q92610 1267 aa8.63□□□□□ -1.03
CPS1-201ENST00000233072 MAGEC2Q9UBF1 373 aaPredicted RBP8.63□□□□□ -1.03
CPS1-201ENST00000233072 POLA1P09884 1462 aaPredicted RBP8.63□□□□□ -1.03
CPS1-201ENST00000233072 GNAI2P04899 355 aa8.63□□□□□ -1.03
CPS1-201ENST00000233072 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
CPS1-201ENST00000233072 CCDC158Q5M9N0 1113 aa8.63□□□□□ -1.03
CPS1-201ENST00000233072 WWC2Q6AWC2 1192 aa8.63□□□□□ -1.03
CPS1-201ENST00000233072 MAP7D2Q96T17 732 aa8.63□□□□□ -1.03
CPS1-201ENST00000233072 R3HCC1Q9Y3T6 440 aaKnown RBP8.63□□□□□ -1.03
CPS1-201ENST00000233072 TTC39AQ5SRH9 613 aa8.63□□□□□ -1.03
CPS1-201ENST00000233072 JMYQ8N9B5 988 aa8.63□□□□□ -1.03
CPS1-201ENST00000233072 PPP2R1AP30153 589 aa8.63□□□□□ -1.03
CPS1-201ENST00000233072 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
CPS1-201ENST00000233072 SPG7Q9UQ90 795 aa8.63□□□□□ -1.03
CPS1-201ENST00000233072 ZNF428Q96B54 188 aa8.63□□□□□ -1.03
CPS1-201ENST00000233072 CYB5RLQ6IPT4 315 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 NEUROD6Q96NK8 337 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 NLRP2Q9NX02 1062 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 TOPBP1Q92547 1522 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 CABP2Q9NPB3 220 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 CCDC27Q2M243 656 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 HSP90B2PQ58FF3 399 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 CDK5RAP3Q96JB5 506 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 TSPY26PQ9H489 355 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 SLC52A1Q9NWF4 448 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 FAM135AQ9P2D6 1515 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 CC2D2AQ9P2K1 1620 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 CWC15Q9P013 229 aaKnown RBP8.62□□□□□ -1.03
CPS1-201ENST00000233072 SNAPC4Q5SXM2 1469 aa8.62□□□□□ -1.03
CPS1-201ENST00000233072 EPRSP07814 1512 aaKnown RBP8.61□□□□□ -1.03
CPS1-201ENST00000233072 THEMISQ8N1K5 641 aaPredicted RBP8.61□□□□□ -1.03
CPS1-201ENST00000233072 ARID3AQ99856 593 aa8.61□□□□□ -1.03
CPS1-201ENST00000233072 RTEL1-TNFRSF6BF6WH68 1400 aa8.61□□□□□ -1.03
CPS1-201ENST00000233072 NAP1L1P55209 391 aaKnown RBP8.61□□□□□ -1.03
CPS1-201ENST00000233072 LUC7LQ9NQ29 371 aaKnown RBP8.61□□□□□ -1.03
CPS1-201ENST00000233072 NLRP6P59044 892 aa8.61□□□□□ -1.03
CPS1-201ENST00000233072 NACAP1Q9BZK3 213 aa8.61□□□□□ -1.03
CPS1-201ENST00000233072 HMOX1P09601 288 aa8.61□□□□□ -1.03
CPS1-201ENST00000233072 RRP12Q5JTH9 1297 aaKnown RBP8.61□□□□□ -1.03
CPS1-201ENST00000233072 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
CPS1-201ENST00000233072 IFT57Q9NWB7 429 aa8.61□□□□□ -1.03
CPS1-201ENST00000233072 IQGAP2Q13576 1575 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 KINO60870 393 aaKnown RBP8.6□□□□□ -1.03
CPS1-201ENST00000233072 CDKL5O76039 1030 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 CAGE1Q8TC20 777 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 CBFA2T2O43439 604 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 TWISTNBQ3B726 338 aaPredicted RBP8.6□□□□□ -1.03
CPS1-201ENST00000233072 HSP90AB2PQ58FF8 381 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 LNPKQ9C0E8 428 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 GGNBP2Q9H3C7 697 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 DCAF8L1A6NGE4 600 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 FAM43AQ8N2R8 423 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 ZSCAN31Q96LW9 406 aaPredicted RBP8.6□□□□□ -1.03
CPS1-201ENST00000233072 PRXQ9BXM0 1461 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 LAMC3Q9Y6N6 1575 aa8.6□□□□□ -1.03
CPS1-201ENST00000233072 MAP3K1Q13233 1512 aa8.59□□□□□ -1.03
CPS1-201ENST00000233072 CAVIN1Q6NZI2 390 aaKnown RBP8.59□□□□□ -1.03
CPS1-201ENST00000233072 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
CPS1-201ENST00000233072 CNKSR2Q8WXI2 1034 aa8.59□□□□□ -1.03
CPS1-201ENST00000233072 OFD1O75665 1012 aa8.59□□□□□ -1.03
CPS1-201ENST00000233072 STIM1Q13586 685 aa8.59□□□□□ -1.03
CPS1-201ENST00000233072 ABTB2Q8N961 1025 aa8.59□□□□□ -1.03
CPS1-201ENST00000233072 NOL7Q9UMY1 257 aaKnown RBP8.59□□□□□ -1.03
CPS1-201ENST00000233072 NASPP49321 788 aaPredicted RBP8.59□□□□□ -1.03
CPS1-201ENST00000233072 CCAR1Q8IX12 1150 aaKnown RBP8.59□□□□□ -1.03
CPS1-201ENST00000233072 WASF1Q92558 559 aa8.59□□□□□ -1.03
CPS1-201ENST00000233072 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPS1-201ENST00000233072 ERLIN2O94905 339 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 MTHFSP49914 203 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 SYCP1Q15431 976 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 CCDC57Q2TAC2 916 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 LRRCC1Q9C099 1032 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 AIMP1Q12904 312 aaKnown RBP8.58□□□□□ -1.04
CPS1-201ENST00000233072 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 TCP11L2Q8N4U5 519 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 CYP46A1Q9Y6A2 500 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 WDR33Q9C0J8 1336 aaKnown RBP8.58□□□□□ -1.04
CPS1-201ENST00000233072 KRT32Q14532 448 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 FOXD4L6Q3SYB3 417 aaPredicted RBP8.58□□□□□ -1.04
CPS1-201ENST00000233072 FOXD4L3Q6VB84 417 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms