RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 LRRFIP1Q32MZ4 808 aaKnown RBP13.9□□□□□ -0.18
PCDH12-201ENST00000231484 CCDC18Q5T9S5 1454 aa13.9□□□□□ -0.18
PCDH12-201ENST00000231484 NACADO15069 1562 aa13.9□□□□□ -0.18
PCDH12-201ENST00000231484 IFIT2P09913 472 aaKnown RBP13.9□□□□□ -0.18
PCDH12-201ENST00000231484 VPS53Q5VIR6 699 aa13.9□□□□□ -0.18
PCDH12-201ENST00000231484 WASHC2AQ641Q2 1341 aa13.9□□□□□ -0.18
PCDH12-201ENST00000231484 CTR9Q6PD62 1173 aa13.9□□□□□ -0.18
PCDH12-201ENST00000231484 ZNF396Q96N95 335 aaPredicted RBP13.9□□□□□ -0.18
PCDH12-201ENST00000231484 MNAT1P51948 309 aa13.89□□□□□ -0.19
PCDH12-201ENST00000231484 RBM33Q96EV2 1170 aaKnown RBP13.89□□□□□ -0.19
PCDH12-201ENST00000231484 ODF2Q5BJF6 829 aa13.89□□□□□ -0.19
PCDH12-201ENST00000231484 PPFIBP1Q86W92 1011 aa13.89□□□□□ -0.19
PCDH12-201ENST00000231484 CRACR2AQ9BSW2 395 aa13.89□□□□□ -0.19
PCDH12-201ENST00000231484 CCDC88BA6NC98 1476 aa13.89□□□□□ -0.19
PCDH12-201ENST00000231484 CCDC181Q5TID7 509 aa13.89□□□□□ -0.19
PCDH12-201ENST00000231484 NUP62CLQ9H1M0 184 aa13.89□□□□□ -0.19
PCDH12-201ENST00000231484 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCDH12-201ENST00000231484 SAFBQ15424 915 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCDH12-201ENST00000231484 HSP90AB2PQ58FF8 381 aa13.88□□□□□ -0.19
PCDH12-201ENST00000231484 ERC2O15083 957 aa13.88□□□□□ -0.19
PCDH12-201ENST00000231484 NF2P35240 595 aa13.87□□□□□ -0.19
PCDH12-201ENST00000231484 KRT85P78386 507 aa13.87□□□□□ -0.19
PCDH12-201ENST00000231484 GCC1Q96CN9 775 aa13.87□□□□□ -0.19
PCDH12-201ENST00000231484 LMAN1P49257 510 aa13.87□□□□□ -0.19
PCDH12-201ENST00000231484 MAP9Q49MG5 647 aa13.87□□□□□ -0.19
PCDH12-201ENST00000231484 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.19
PCDH12-201ENST00000231484 IVLP07476 585 aa13.86□□□□□ -0.19
PCDH12-201ENST00000231484 CECR2Q9BXF3 1484 aa13.86□□□□□ -0.19
PCDH12-201ENST00000231484 BAZ1AQ9NRL2 1556 aaPredicted RBP13.86□□□□□ -0.19
PCDH12-201ENST00000231484 XRCC6P12956 609 aaKnown RBP eCLIP13.86□□□□□ -0.19
PCDH12-201ENST00000231484 PIP4K2AP48426 406 aaPredicted RBP13.86□□□□□ -0.19
PCDH12-201ENST00000231484 OFD1O75665 1012 aa13.86□□□□□ -0.19
PCDH12-201ENST00000231484 CEP57L1Q8IYX8 460 aa13.86□□□□□ -0.19
PCDH12-201ENST00000231484 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
PCDH12-201ENST00000231484 MCM3P25205 808 aa13.85□□□□□ -0.19
PCDH12-201ENST00000231484 PAXBP1Q9Y5B6 917 aa13.85□□□□□ -0.19
PCDH12-201ENST00000231484 CCDC183Q5T5S1 534 aa13.85□□□□□ -0.19
PCDH12-201ENST00000231484 ZNHIT6Q9NWK9 470 aaKnown RBP13.85□□□□□ -0.19
PCDH12-201ENST00000231484 CASQ1P31415 396 aa13.85□□□□□ -0.19
PCDH12-201ENST00000231484 C16orf45Q96MC5 204 aaPredicted RBP13.85□□□□□ -0.19
PCDH12-201ENST00000231484 DACH1Q9UI36 760 aa13.85□□□□□ -0.19
PCDH12-201ENST00000231484 G3V3G9 751 aa13.85□□□□□ -0.19
PCDH12-201ENST00000231484 KIF20AO95235 890 aa13.85□□□□□ -0.19
PCDH12-201ENST00000231484 TRDNQ13061 729 aa13.85□□□□□ -0.19
PCDH12-201ENST00000231484 MAP3K11Q16584 847 aa13.85□□□□□ -0.19
PCDH12-201ENST00000231484 DCAF8Q5TAQ9 597 aa13.85□□□□□ -0.19
PCDH12-201ENST00000231484 TDO2P48775 406 aa13.84□□□□□ -0.19
PCDH12-201ENST00000231484 BRPF1P55201 1214 aaPredicted RBP13.84□□□□□ -0.19
PCDH12-201ENST00000231484 ENOX2Q16206 610 aaKnown RBP13.84□□□□□ -0.19
PCDH12-201ENST00000231484 RNF187Q5TA31 235 aaPredicted RBP13.84□□□□□ -0.19
PCDH12-201ENST00000231484 JAKMIP3Q5VZ66 844 aa13.84□□□□□ -0.19
PCDH12-201ENST00000231484 ZSCAN12O43309 604 aa13.84□□□□□ -0.19
PCDH12-201ENST00000231484 WWC1Q8IX03 1113 aa13.84□□□□□ -0.19
PCDH12-201ENST00000231484 TNPO1Q92973 898 aaKnown RBP13.84□□□□□ -0.19
PCDH12-201ENST00000231484 HSP90AB4PQ58FF6 505 aa13.84□□□□□ -0.19
PCDH12-201ENST00000231484 CNTROBQ8N137 903 aa13.84□□□□□ -0.19
PCDH12-201ENST00000231484 TRIM34Q9BYJ4 488 aa13.83□□□□□ -0.19
PCDH12-201ENST00000231484 RIPK4P57078 832 aa13.83□□□□□ -0.2
PCDH12-201ENST00000231484 NFXL1Q6ZNB6 911 aa13.83□□□□□ -0.2
PCDH12-201ENST00000231484 PAXIP1Q6ZW49 1069 aaPredicted RBP13.83□□□□□ -0.2
PCDH12-201ENST00000231484 CCDC148Q8NFR7 591 aa13.83□□□□□ -0.2
PCDH12-201ENST00000231484 MAGEC2Q9UBF1 373 aaPredicted RBP13.83□□□□□ -0.2
PCDH12-201ENST00000231484 POTEB2H3BUK9 544 aa13.83□□□□□ -0.2
PCDH12-201ENST00000231484 AMPHP49418 695 aa13.83□□□□□ -0.2
PCDH12-201ENST00000231484 TTC31Q49AM3 519 aaPredicted RBP13.83□□□□□ -0.2
PCDH12-201ENST00000231484 NEMFO60524 1076 aa13.83□□□□□ -0.2
PCDH12-201ENST00000231484 URI1O94763 535 aaPredicted RBP13.83□□□□□ -0.2
PCDH12-201ENST00000231484 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
PCDH12-201ENST00000231484 CLASRPQ8N2M8 674 aaKnown RBP13.83□□□□□ -0.2
PCDH12-201ENST00000231484 UPF3BQ9BZI7 483 aaKnown RBP13.83□□□□□ -0.2
PCDH12-201ENST00000231484 TMX4Q9H1E5 349 aaPredicted RBP13.83□□□□□ -0.2
PCDH12-201ENST00000231484 STK38Q15208 465 aa13.82□□□□□ -0.2
PCDH12-201ENST00000231484 USP25Q9UHP3 1055 aa13.82□□□□□ -0.2
PCDH12-201ENST00000231484 ADAMTS8Q9UP79 889 aa13.82□□□□□ -0.2
PCDH12-201ENST00000231484 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
PCDH12-201ENST00000231484 SMTNL1A8MU46 457 aa13.82□□□□□ -0.2
PCDH12-201ENST00000231484 CCDC91Q7Z6B0 441 aa13.82□□□□□ -0.2
PCDH12-201ENST00000231484 TBC1D2Q9BYX2 928 aa13.82□□□□□ -0.2
PCDH12-201ENST00000231484 EPS15P42566 896 aa13.81□□□□□ -0.2
PCDH12-201ENST00000231484 CEBPZQ03701 1054 aaKnown RBP13.81□□□□□ -0.2
PCDH12-201ENST00000231484 TAX1BP1Q86VP1 789 aa13.81□□□□□ -0.2
PCDH12-201ENST00000231484 NGDNQ8NEJ9 315 aaKnown RBP13.81□□□□□ -0.2
PCDH12-201ENST00000231484 SFPQP23246 707 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCDH12-201ENST00000231484 NECTIN2Q92692 538 aa13.81□□□□□ -0.2
PCDH12-201ENST00000231484 SMARCC1Q92922 1105 aaPredicted RBP13.81□□□□□ -0.2
PCDH12-201ENST00000231484 SPATA32Q96LK8 384 aa13.81□□□□□ -0.2
PCDH12-201ENST00000231484 CLIP2Q9UDT6 1046 aa13.81□□□□□ -0.2
PCDH12-201ENST00000231484 KIF3BO15066 747 aa13.81□□□□□ -0.2
PCDH12-201ENST00000231484 UVSSAQ2YD98 709 aa13.81□□□□□ -0.2
PCDH12-201ENST00000231484 LRRFIP2Q9Y608 721 aaKnown RBP13.81□□□□□ -0.2
PCDH12-201ENST00000231484 GBP2P32456 591 aaPredicted RBP13.8□□□□□ -0.2
PCDH12-201ENST00000231484 SLC26A8Q96RN1 970 aa13.8□□□□□ -0.2
PCDH12-201ENST00000231484 RASSF4Q9H2L5 321 aa13.8□□□□□ -0.2
PCDH12-201ENST00000231484 CEP135Q66GS9 1140 aa13.8□□□□□ -0.2
PCDH12-201ENST00000231484 ZFP91Q96JP5 570 aaPredicted RBP13.8□□□□□ -0.2
PCDH12-201ENST00000231484 ADCY5O95622 1261 aa13.8□□□□□ -0.2
PCDH12-201ENST00000231484 LUC7LQ9NQ29 371 aaKnown RBP13.8□□□□□ -0.2
PCDH12-201ENST00000231484 OGFRQ9NZT2 677 aa13.79□□□□□ -0.2
PCDH12-201ENST00000231484 ARHGAP29Q52LW3 1261 aa13.79□□□□□ -0.2
PCDH12-201ENST00000231484 BCAR3O75815 825 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms