RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
SPARC-201ENST00000231061 SYCP2Q9BX26 1530 aa10.42□□□□□ -0.74
SPARC-201ENST00000231061 ARHGEF5Q12774 1597 aa10.42□□□□□ -0.74
SPARC-201ENST00000231061 MYBPC2Q14324 1141 aa10.42□□□□□ -0.74
SPARC-201ENST00000231061 SAMD9LQ8IVG5 1584 aa10.42□□□□□ -0.74
SPARC-201ENST00000231061 TNNT1P13805 278 aa10.41□□□□□ -0.74
SPARC-201ENST00000231061 FRAT1Q92837 279 aaPredicted RBP10.41□□□□□ -0.74
SPARC-201ENST00000231061 PANK3Q9H999 370 aa10.41□□□□□ -0.74
SPARC-201ENST00000231061 MRVI1Q9Y6F6 885 aa10.41□□□□□ -0.74
SPARC-201ENST00000231061 RHBDL3P58872 404 aa10.41□□□□□ -0.74
SPARC-201ENST00000231061 GEMIN8Q9NWZ8 242 aaKnown RBP10.41□□□□□ -0.74
SPARC-201ENST00000231061 PPME1Q9Y570 386 aa10.41□□□□□ -0.74
SPARC-201ENST00000231061 TMF1P82094 1093 aa10.41□□□□□ -0.74
SPARC-201ENST00000231061 CDCA7LQ96GN5 454 aa10.41□□□□□ -0.74
SPARC-201ENST00000231061 RPS6KL1Q9Y6S9 549 aa10.41□□□□□ -0.74
SPARC-201ENST00000231061 CCDC181Q5TID7 509 aa10.4□□□□□ -0.74
SPARC-201ENST00000231061 NBPF6Q5VWK0 638 aa10.4□□□□□ -0.74
SPARC-201ENST00000231061 NBPF5PQ86XG9 351 aaPredicted RBP10.4□□□□□ -0.74
SPARC-201ENST00000231061 NBPF4Q96M43 638 aa10.4□□□□□ -0.74
SPARC-201ENST00000231061 TMX4Q9H1E5 349 aaPredicted RBP10.4□□□□□ -0.74
SPARC-201ENST00000231061 DISP3Q9P2K9 1392 aa10.4□□□□□ -0.74
SPARC-201ENST00000231061 PLEKHH2Q8IVE3 1493 aa10.39□□□□□ -0.75
SPARC-201ENST00000231061 MFSD4BQ5TF39 518 aa10.39□□□□□ -0.75
SPARC-201ENST00000231061 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
SPARC-201ENST00000231061 A2MP01023 1474 aa10.39□□□□□ -0.75
SPARC-201ENST00000231061 TESPA1A2RU30 521 aaPredicted RBP10.38□□□□□ -0.75
SPARC-201ENST00000231061 MPHOSPH10O00566 681 aaKnown RBP10.38□□□□□ -0.75
SPARC-201ENST00000231061 PLIN1O60240 522 aa10.38□□□□□ -0.75
SPARC-201ENST00000231061 SATB1Q01826 763 aa10.38□□□□□ -0.75
SPARC-201ENST00000231061 PDE3BQ13370 1112 aa10.38□□□□□ -0.75
SPARC-201ENST00000231061 ERBINQ96RT1 1412 aa10.38□□□□□ -0.75
SPARC-201ENST00000231061 IRX5P78411 483 aaPredicted RBP10.37□□□□□ -0.75
SPARC-201ENST00000231061 ARHGEF1Q92888 912 aaKnown RBP10.37□□□□□ -0.75
SPARC-201ENST00000231061 PREX2Q70Z35 1606 aa10.37□□□□□ -0.75
SPARC-201ENST00000231061 KIF20AO95235 890 aa10.37□□□□□ -0.75
SPARC-201ENST00000231061 IPO9Q96P70 1041 aaKnown RBP10.37□□□□□ -0.75
SPARC-201ENST00000231061 PER1O15534 1290 aaPredicted RBP10.37□□□□□ -0.75
SPARC-201ENST00000231061 FAM13BQ9NYF5 915 aa10.37□□□□□ -0.75
SPARC-201ENST00000231061 PLA2R1Q13018 1463 aa10.36□□□□□ -0.75
SPARC-201ENST00000231061 BORCS6Q96GS4 357 aa10.36□□□□□ -0.75
SPARC-201ENST00000231061 TESK2Q96S53 571 aa10.36□□□□□ -0.75
SPARC-201ENST00000231061 CDC42BPBQ9Y5S2 1711 aa10.36□□□□□ -0.75
SPARC-201ENST00000231061 PAX3P23760 479 aa10.36□□□□□ -0.75
SPARC-201ENST00000231061 ZNF280DQ6N043 979 aa10.36□□□□□ -0.75
SPARC-201ENST00000231061 COL17A1Q9UMD9 1497 aaPredicted RBP10.36□□□□□ -0.75
SPARC-201ENST00000231061 RIOK3O14730 519 aaKnown RBP10.36□□□□□ -0.75
SPARC-201ENST00000231061 GORABQ5T7V8 394 aa10.36□□□□□ -0.75
SPARC-201ENST00000231061 MTA3Q9BTC8 594 aa10.36□□□□□ -0.75
SPARC-201ENST00000231061 TRPM1Q7Z4N2 1603 aa10.36□□□□□ -0.75
SPARC-201ENST00000231061 TTC37Q6PGP7 1564 aa10.35□□□□□ -0.75
SPARC-201ENST00000231061 WDR43Q15061 677 aaKnown RBP eCLIP10.35□□□□□ -0.75
SPARC-201ENST00000231061 CT47A1Q5JQC4 288 aaPredicted RBP10.35□□□□□ -0.75
SPARC-201ENST00000231061 KNSTRNQ9Y448 316 aa10.35□□□□□ -0.75
SPARC-201ENST00000231061 CSB-PGBD3P0DP91 1061 aa10.35□□□□□ -0.75
SPARC-201ENST00000231061 ZNF662Q6ZS27 426 aa10.35□□□□□ -0.75
SPARC-201ENST00000231061 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
SPARC-201ENST00000231061 TPM2P07951 284 aa10.34□□□□□ -0.75
SPARC-201ENST00000231061 EFCAB2Q5VUJ9 269 aa10.34□□□□□ -0.75
SPARC-201ENST00000231061 PPP1R1BQ9UD71 204 aaPredicted RBP10.34□□□□□ -0.75
SPARC-201ENST00000231061 GPRASP1Q5JY77 1395 aa10.34□□□□□ -0.75
SPARC-201ENST00000231061 E9PCH4 1651 aa10.34□□□□□ -0.75
SPARC-201ENST00000231061 EPB41L2O43491 1005 aaKnown RBP10.34□□□□□ -0.75
SPARC-201ENST00000231061 TSPAN18Q96SJ8 248 aa10.34□□□□□ -0.75
SPARC-201ENST00000231061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.33□□□□□ -0.76
SPARC-201ENST00000231061 NBPF10Q6P3W6 841 aaKnown RBP10.33□□□□□ -0.76
SPARC-201ENST00000231061 CRBNQ96SW2 442 aa10.33□□□□□ -0.76
SPARC-201ENST00000231061 TRIM6-TRIM34B2RNG4 842 aa10.33□□□□□ -0.76
SPARC-201ENST00000231061 KCNJ4P48050 445 aa10.33□□□□□ -0.76
SPARC-201ENST00000231061 TRIM34Q9BYJ4 488 aa10.33□□□□□ -0.76
SPARC-201ENST00000231061 SUGT1Q9Y2Z0 365 aa10.32□□□□□ -0.76
SPARC-201ENST00000231061 MAP4K4O95819 1239 aaPredicted RBP10.32□□□□□ -0.76
SPARC-201ENST00000231061 PDE4AP27815 886 aa10.32□□□□□ -0.76
SPARC-201ENST00000231061 IRF5Q13568 498 aa10.32□□□□□ -0.76
SPARC-201ENST00000231061 MICAL1Q8TDZ2 1067 aa10.32□□□□□ -0.76
SPARC-201ENST00000231061 YY1AP1Q9H869 796 aa10.32□□□□□ -0.76
SPARC-201ENST00000231061 ADAMTS8Q9UP79 889 aa10.32□□□□□ -0.76
SPARC-201ENST00000231061 CEP83Q9Y592 693 aa10.32□□□□□ -0.76
SPARC-201ENST00000231061 UNC13BO14795 1591 aa10.32□□□□□ -0.76
SPARC-201ENST00000231061 CCT2P78371 535 aaKnown RBP10.31□□□□□ -0.76
SPARC-201ENST00000231061 HDAC1Q13547 482 aaPredicted RBP10.31□□□□□ -0.76
SPARC-201ENST00000231061 SPAG9O60271 1321 aaKnown RBP10.31□□□□□ -0.76
SPARC-201ENST00000231061 DUOX2Q9NRD8 1548 aa10.31□□□□□ -0.76
SPARC-201ENST00000231061 SKAP1Q86WV1 359 aa10.31□□□□□ -0.76
SPARC-201ENST00000231061 GAS2L2Q8NHY3 880 aa10.31□□□□□ -0.76
SPARC-201ENST00000231061 FBXW7Q969H0 707 aa10.31□□□□□ -0.76
SPARC-201ENST00000231061 PRDM15P57071 1507 aaPredicted RBP10.31□□□□□ -0.76
SPARC-201ENST00000231061 ERICH4A6NGS2 130 aa10.3□□□□□ -0.76
SPARC-201ENST00000231061 ZSCAN20P17040 1043 aaPredicted RBP10.3□□□□□ -0.76
SPARC-201ENST00000231061 ACRBPQ8NEB7 543 aa10.3□□□□□ -0.76
SPARC-201ENST00000231061 VTI1AQ96AJ9 217 aa10.3□□□□□ -0.76
SPARC-201ENST00000231061 CLCN1P35523 988 aa10.3□□□□□ -0.76
SPARC-201ENST00000231061 AFAP1Q8N556 730 aa10.3□□□□□ -0.76
SPARC-201ENST00000231061 EIF2AK4Q9P2K8 1649 aaKnown RBP10.3□□□□□ -0.76
SPARC-201ENST00000231061 MAST1Q9Y2H9 1570 aa10.3□□□□□ -0.76
SPARC-201ENST00000231061 LETM1O95202 739 aaPredicted RBP10.3□□□□□ -0.76
SPARC-201ENST00000231061 KCNV2Q8TDN2 545 aa10.3□□□□□ -0.76
SPARC-201ENST00000231061 CAPN15O75808 1086 aa10.29□□□□□ -0.76
SPARC-201ENST00000231061 PPP2R1AP30153 589 aa10.29□□□□□ -0.76
SPARC-201ENST00000231061 KRBA2Q6ZNG9 492 aa10.29□□□□□ -0.76
SPARC-201ENST00000231061 MAP7D2Q96T17 732 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms