RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 RAD51AP2Q09MP3 1159 aa11.59□□□□□ -0.55
VSIG1-201ENST00000217957 SLFNL1Q499Z3 407 aa11.59□□□□□ -0.55
VSIG1-201ENST00000217957 NT5DC4Q86YG4 428 aa11.59□□□□□ -0.55
VSIG1-201ENST00000217957 FOXD4Q12950 439 aaPredicted RBP11.58□□□□□ -0.55
VSIG1-201ENST00000217957 SDE2Q6IQ49 451 aa11.58□□□□□ -0.55
VSIG1-201ENST00000217957 EPS8L1Q8TE68 723 aa11.58□□□□□ -0.55
VSIG1-201ENST00000217957 CHPF2Q9P2E5 772 aa11.58□□□□□ -0.55
VSIG1-201ENST00000217957 FAN1Q9Y2M0 1017 aa11.58□□□□□ -0.55
VSIG1-201ENST00000217957 MRPL42Q9Y6G3 142 aaKnown RBP11.58□□□□□ -0.55
VSIG1-201ENST00000217957 CCDC194A0A1B0GVG4 234 aa11.58□□□□□ -0.56
VSIG1-201ENST00000217957 PPFIA4O75335 1185 aa11.58□□□□□ -0.56
VSIG1-201ENST00000217957 ADAMTSL3P82987 1691 aa11.58□□□□□ -0.56
VSIG1-201ENST00000217957 MTMR3Q13615 1198 aa11.58□□□□□ -0.56
VSIG1-201ENST00000217957 RALBP1Q15311 655 aa11.58□□□□□ -0.56
VSIG1-201ENST00000217957 DEPDC4Q8N2C3 294 aa11.58□□□□□ -0.56
VSIG1-201ENST00000217957 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
VSIG1-201ENST00000217957 LGR5O75473 907 aa11.57□□□□□ -0.56
VSIG1-201ENST00000217957 FBXO33Q7Z6M2 555 aa11.57□□□□□ -0.56
VSIG1-201ENST00000217957 PPARGC1BQ86YN6 1023 aaKnown RBP11.57□□□□□ -0.56
VSIG1-201ENST00000217957 GPATCH11Q8N954 259 aa11.57□□□□□ -0.56
VSIG1-201ENST00000217957 PIK3CDO00329 1044 aa11.57□□□□□ -0.56
VSIG1-201ENST00000217957 IGBP1P78318 339 aa11.57□□□□□ -0.56
VSIG1-201ENST00000217957 BMS1Q14692 1282 aaKnown RBP11.57□□□□□ -0.56
VSIG1-201ENST00000217957 PRR12Q9ULL5 1215 aa11.57□□□□□ -0.56
VSIG1-201ENST00000217957 ABL1P00519 1130 aa11.56□□□□□ -0.56
VSIG1-201ENST00000217957 OS9Q13438 667 aaPredicted RBP11.56□□□□□ -0.56
VSIG1-201ENST00000217957 TERF2IPQ9NYB0 399 aa11.56□□□□□ -0.56
VSIG1-201ENST00000217957 RTL5Q5HYW3 569 aaPredicted RBP11.56□□□□□ -0.56
VSIG1-201ENST00000217957 PCDHB15Q9Y5E8 787 aa11.56□□□□□ -0.56
VSIG1-201ENST00000217957 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
VSIG1-201ENST00000217957 TBX22Q9Y458 520 aa11.55□□□□□ -0.56
VSIG1-201ENST00000217957 TLDC2A0PJX2 215 aa11.55□□□□□ -0.56
VSIG1-201ENST00000217957 U2SURPO15042 1029 aaKnown RBP11.55□□□□□ -0.56
VSIG1-201ENST00000217957 GPHNQ9NQX3 736 aaPredicted RBP11.55□□□□□ -0.56
VSIG1-201ENST00000217957 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
VSIG1-201ENST00000217957 CREB3O43889 395 aa11.55□□□□□ -0.56
VSIG1-201ENST00000217957 MAP3K4Q9Y6R4 1608 aa11.54□□□□□ -0.56
VSIG1-201ENST00000217957 GAPVD1Q14C86 1478 aa11.54□□□□□ -0.56
VSIG1-201ENST00000217957 TMEM259Q4ZIN3 620 aa11.54□□□□□ -0.56
VSIG1-201ENST00000217957 MORC4Q8TE76 937 aa11.54□□□□□ -0.56
VSIG1-201ENST00000217957 ADGRL1O94910 1474 aa11.54□□□□□ -0.56
VSIG1-201ENST00000217957 HELBQ8NG08 1087 aaPredicted RBP11.53□□□□□ -0.56
VSIG1-201ENST00000217957 ALG2Q9H553 416 aa11.53□□□□□ -0.56
VSIG1-201ENST00000217957 SOX12O15370 315 aa11.53□□□□□ -0.56
VSIG1-201ENST00000217957 SSFA2P28290 1259 aa11.53□□□□□ -0.56
VSIG1-201ENST00000217957 LDLRAD1Q5T700 205 aa11.53□□□□□ -0.56
VSIG1-201ENST00000217957 CABLES1Q8TDN4 633 aa11.53□□□□□ -0.56
VSIG1-201ENST00000217957 ZNF710Q8N1W2 664 aa11.52□□□□□ -0.57
VSIG1-201ENST00000217957 KCNB2Q92953 911 aa11.52□□□□□ -0.57
VSIG1-201ENST00000217957 CAPN10Q9HC96 672 aa11.52□□□□□ -0.57
VSIG1-201ENST00000217957 MAFGO15525 162 aa11.52□□□□□ -0.57
VSIG1-201ENST00000217957 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
VSIG1-201ENST00000217957 ACBD3Q9H3P7 528 aa11.52□□□□□ -0.57
VSIG1-201ENST00000217957 NOVA2Q9UNW9 492 aaKnown RBP11.52□□□□□ -0.57
VSIG1-201ENST00000217957 TINF2Q9BSI4 451 aa11.51□□□□□ -0.57
VSIG1-201ENST00000217957 PTMSP20962 102 aa11.51□□□□□ -0.57
VSIG1-201ENST00000217957 H3BRB1 525 aa11.5□□□□□ -0.57
VSIG1-201ENST00000217957 TUT1Q9H6E5 874 aaKnown RBP11.5□□□□□ -0.57
VSIG1-201ENST00000217957 PPP2R2DQ66LE6 453 aa11.5□□□□□ -0.57
VSIG1-201ENST00000217957 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
VSIG1-201ENST00000217957 STAG1Q8WVM7 1258 aa11.49□□□□□ -0.57
VSIG1-201ENST00000217957 NDUFV2P19404 249 aa11.49□□□□□ -0.57
VSIG1-201ENST00000217957 RIC3Q7Z5B4 369 aa11.49□□□□□ -0.57
VSIG1-201ENST00000217957 KANK4Q5T7N3 995 aaPredicted RBP11.48□□□□□ -0.57
VSIG1-201ENST00000217957 CCDC146Q8IYE0 955 aa11.48□□□□□ -0.57
VSIG1-201ENST00000217957 TRIM34Q9BYJ4 488 aa11.48□□□□□ -0.57
VSIG1-201ENST00000217957 TOPBP1Q92547 1522 aa11.48□□□□□ -0.57
VSIG1-201ENST00000217957 ERCC3P19447 782 aa11.48□□□□□ -0.57
VSIG1-201ENST00000217957 NME8Q8N427 588 aa11.48□□□□□ -0.57
VSIG1-201ENST00000217957 TSC1Q92574 1164 aa11.48□□□□□ -0.57
VSIG1-201ENST00000217957 NPDC1Q9NQX5 325 aaPredicted RBP11.48□□□□□ -0.57
VSIG1-201ENST00000217957 PPP1R3GB7ZBB8 358 aa11.47□□□□□ -0.57
VSIG1-201ENST00000217957 SH3BP5O60239 455 aa11.47□□□□□ -0.57
VSIG1-201ENST00000217957 CCDC61Q9Y6R9 512 aa11.47□□□□□ -0.57
VSIG1-201ENST00000217957 TEX14Q8IWB6 1497 aa11.47□□□□□ -0.57
VSIG1-201ENST00000217957 MOXD2PA6NHM9 499 aa11.46□□□□□ -0.57
VSIG1-201ENST00000217957 MAPK1P28482 360 aa11.46□□□□□ -0.57
VSIG1-201ENST00000217957 ARID4AP29374 1257 aaPredicted RBP11.46□□□□□ -0.57
VSIG1-201ENST00000217957 NOP9Q86U38 636 aaKnown RBP11.46□□□□□ -0.57
VSIG1-201ENST00000217957 METTL3Q86U44 580 aaKnown RBP11.46□□□□□ -0.57
VSIG1-201ENST00000217957 RPUSD2Q8IZ73 545 aaKnown RBP11.46□□□□□ -0.57
VSIG1-201ENST00000217957 NDUFB9Q9Y6M9 179 aa11.46□□□□□ -0.57
VSIG1-201ENST00000217957 KIF4AO95239 1232 aa11.46□□□□□ -0.58
VSIG1-201ENST00000217957 MAP3K9P80192 1104 aa11.46□□□□□ -0.58
VSIG1-201ENST00000217957 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
VSIG1-201ENST00000217957 PPP1R18Q6NYC8 613 aa11.45□□□□□ -0.58
VSIG1-201ENST00000217957 NUP160Q12769 1436 aa11.45□□□□□ -0.58
VSIG1-201ENST00000217957 SNAPC4Q5SXM2 1469 aa11.45□□□□□ -0.58
VSIG1-201ENST00000217957 ZFYVE27Q5T4F4 411 aa11.45□□□□□ -0.58
VSIG1-201ENST00000217957 ATP2B1P20020 1258 aa11.44□□□□□ -0.58
VSIG1-201ENST00000217957 LRRN4Q8WUT4 740 aa11.44□□□□□ -0.58
VSIG1-201ENST00000217957 COL4A3BPQ9Y5P4 624 aa11.44□□□□□ -0.58
VSIG1-201ENST00000217957 SETQ01105 290 aaPredicted RBP11.44□□□□□ -0.58
VSIG1-201ENST00000217957 FILIP1Q7Z7B0 1213 aa11.43□□□□□ -0.58
VSIG1-201ENST00000217957 TMX4Q9H1E5 349 aaPredicted RBP11.43□□□□□ -0.58
VSIG1-201ENST00000217957 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
VSIG1-201ENST00000217957 PCDHGB7Q9Y5F8 929 aa11.43□□□□□ -0.58
VSIG1-201ENST00000217957 METTL16Q86W50 562 aaKnown RBP11.43□□□□□ -0.58
VSIG1-201ENST00000217957 KDM4FA0A1W2PPD8 638 aa11.42□□□□□ -0.58
VSIG1-201ENST00000217957 B4GALNT3Q6L9W6 998 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms