RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Kif2cQ922S8 721 aa17.14■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Nrxn1Q9CS84 1514 aa17.13■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Ift172Q6VH22 1749 aa17.13■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Ciz1Q8VEH2 845 aa17.13■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Kiaa0556Q8C753 1610 aa17.13■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Arid3cA6PWV5 409 aa17.12■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Terf2O35144 541 aa17.12■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Exosc9Q9JHI7 438 aaKnown RBP17.12■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Ythdc2B2RR83 1445 aaKnown RBP17.12■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Phf14Q9D4H9 881 aa17.12■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Kif18aQ91WD7 886 aa17.11■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Akap12Q9WTQ5 1684 aa17.11■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Ttc21aQ8C0S4 1314 aa17.11■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Maco1Q7TQE6 664 aaKnown RBP17.11■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Mcm4P49717 862 aa17.1■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Gli2Q0VGT2 1544 aa17.1■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Prdm2A2A7B5 1709 aaKnown RBP17.1■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Cavin4A2AMM0 362 aa17.1■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Ccdc60Q8C4J0 545 aa17.1■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Ankrd50F7BE84 1390 aa17.1■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Cdc42bpgQ80UW5 1551 aa17.1■□□□□ 0.33
Clcn4-203ENSMUST00000210061 SkilQ60665 675 aa17.09■□□□□ 0.33
Clcn4-203ENSMUST00000210061 OvosQ3UU35 1456 aa17.08■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Kif20aP97329 887 aa17.08■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Ssh1Q76I79 1042 aa17.08■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Znf330Q922H9 316 aa17.08■□□□□ 0.33
Clcn4-203ENSMUST00000210061 Gtf2a1Q99PM3 378 aa17.08■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Ccdc171E9Q1U1 1324 aa17.08■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Uhrf1bp1B2KF50 1429 aa17.07■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Rbm25B2RY56 838 aaKnown RBP17.07■□□□□ 0.32
Clcn4-203ENSMUST00000210061 FanciQ8K368 1330 aa17.07■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Cog6Q8R3I3 657 aa17.07■□□□□ 0.32
Clcn4-203ENSMUST00000210061 PaskQ8CEE6 1383 aa17.06■□□□□ 0.32
Clcn4-203ENSMUST00000210061 KnstrnQ9D9Z1 312 aaKnown RBP17.06■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Mroh1E0CZ22 1640 aa17.05■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Brd1E9PZ26 1189 aaKnown RBP17.05■□□□□ 0.32
Clcn4-203ENSMUST00000210061 G3bp1P97855 465 aaKnown RBP17.05■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Zranb1Q7M760 708 aa17.05■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Znf541Q0GGX2 1363 aa17.05■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Rangap1P46061 589 aaKnown RBP17.04■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Stk26Q99JT2 416 aa17.04■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Cfap65Q3V0B4 1847 aa17.04■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Atp10aO54827 1508 aa17.04■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Pik3r4Q8VD65 1358 aa17.03■□□□□ 0.32
Clcn4-203ENSMUST00000210061 PtprtQ99M80 1454 aa17.03■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Gm10093D3YYI8 482 aa17.02■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Hdac1O09106 482 aaKnown RBP17.02■□□□□ 0.32
Clcn4-203ENSMUST00000210061 Nutm1Q8BHP2 1126 aa17.01■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Ptch1Q61115 1434 aa17.01■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Plcb2A3KGF7 1181 aa17■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Il4rP16382 810 aa17■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Swt1Q9DBQ9 907 aa17■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Ddit3P35639 168 aa17■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Wwc1Q5SXA9 1104 aa17■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Nsfl1cQ9CZ44 370 aaKnown RBP17■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Rsph3aQ3UFY4 516 aa16.99■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Naip7Q9JIB3 1402 aa16.99■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Ncapd2Q8K2Z4 1392 aa16.99■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Rfx1P48377 963 aa16.98■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Arhgap23Q69ZH9 1483 aa16.98■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Gsto1O09131 240 aa16.98■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Fchsd2Q3USJ8 740 aa16.98■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Q4VA45 678 aa16.98■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Aldh1l1Q8R0Y6 902 aa16.98■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Isy1Q69ZQ2 285 aaKnown RBP16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Plekhm2Q80TQ5 1018 aa16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Tmco5bQ80X59 307 aa16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Cetn4Q8K4K1 168 aa16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Slc12a5Q91V14 1138 aa16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Rrp9Q91WM3 475 aaKnown RBP16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 NinlQ6ZQ12 1394 aa16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Knl1Q66JQ7 1612 aa16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Nectin2P32507 530 aa16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Aplp1Q03157 653 aa16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Pknox2Q8BG99 474 aa16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Atp7bQ64446 1462 aa16.97■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Q3UPC7 1272 aa16.96■□□□□ 0.31
Clcn4-203ENSMUST00000210061 MvpQ9EQK5 861 aa16.96■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Usp32F8VPZ3 1604 aa16.96■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Nsd3Q6P2L6 1439 aa16.96■□□□□ 0.31
Clcn4-203ENSMUST00000210061 Atp1b4Q99ME6 356 aa16.96■□□□□ 0.3
Clcn4-203ENSMUST00000210061 PalmQ9Z0P4 383 aa16.96■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Wdr63B2RY71 923 aa16.95■□□□□ 0.3
Clcn4-203ENSMUST00000210061 LifrP42703 1092 aa16.95■□□□□ 0.3
Clcn4-203ENSMUST00000210061 AglF8VPN4 1532 aa16.95■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Shq1Q7TMX5 569 aa16.95■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Chmp4bQ9D8B3 224 aaKnown RBP16.94■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Cdc37l1Q9CZP7 335 aa16.94■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Vamp4O70480 141 aa16.93■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Tbc1d9Q3UYK3 1264 aa16.93■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Kcna4Q61423 654 aa16.93■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Tfip11Q9ERA6 838 aaKnown RBP16.93■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Cep170bQ80U49 1574 aa16.93■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Prrc2bQ7TPM1 1486 aaKnown RBP16.92■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Ankrd44B2RXR6 993 aa16.92■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Trim28Q62318 834 aa16.92■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Kdm4cQ8VCD7 1054 aa16.92■□□□□ 0.3
Clcn4-203ENSMUST00000210061 CltcQ68FD5 1675 aaKnown RBP16.92■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Cdk19Q8BWD8 501 aa16.91■□□□□ 0.3
Clcn4-203ENSMUST00000210061 Paxip1Q6NZQ4 1056 aa16.91■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms