RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 Dusp27Q148W8 1138 aa13.55□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Ccdc171E9Q1U1 1324 aa13.55□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Abca6Q8K441 1624 aa13.55□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Ehbp1l1Q99MS7 1716 aa13.54□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Il4rP16382 810 aa13.54□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Paxip1Q6NZQ4 1056 aa13.54□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Trim44Q9QXA7 346 aa13.54□□□□□ -0.24
Rnf40-206ENSMUST00000206914 CastP51125 788 aa13.54□□□□□ -0.24
Rnf40-206ENSMUST00000206914 IqubQ8CDK3 788 aa13.54□□□□□ -0.24
Rnf40-206ENSMUST00000206914 CenpjQ569L8 1344 aa13.54□□□□□ -0.24
Rnf40-206ENSMUST00000206914 PalldQ9ET54 1408 aa13.54□□□□□ -0.24
Rnf40-206ENSMUST00000206914 AU019823E9PUQ3 292 aa13.53□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Ino80Q6ZPV2 1559 aa13.53□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Ddrgk1Q80WW9 315 aa13.53□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Znf608Q56A10 1511 aa13.53□□□□□ -0.24
Rnf40-206ENSMUST00000206914 FanciQ8K368 1330 aa13.53□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Wwc1Q5SXA9 1104 aa13.53□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Abca9Q8K449 1623 aa13.52□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Chmp4bQ9D8B3 224 aaKnown RBP13.52□□□□□ -0.24
Rnf40-206ENSMUST00000206914 Brd1E9PZ26 1189 aaKnown RBP13.52□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Cetn4Q8K4K1 168 aa13.51□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Cog6Q8R3I3 657 aa13.51□□□□□ -0.25
Rnf40-206ENSMUST00000206914 DmtnQ9WV69 405 aa13.51□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Igf1rQ60751 1373 aa13.51□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Ttc21aQ8C0S4 1314 aa13.51□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Maco1Q7TQE6 664 aaKnown RBP13.51□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Ppp1r3fQ9JIG4 799 aa13.51□□□□□ -0.25
Rnf40-206ENSMUST00000206914 PaskQ8CEE6 1383 aa13.51□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Cavin4A2AMM0 362 aa13.51□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Znf541Q0GGX2 1363 aa13.5□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Ddit3P35639 168 aa13.5□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Lemd3Q9WU40 921 aa13.5□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Ccdc60Q8C4J0 545 aa13.49□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Kdm4cQ8VCD7 1054 aa13.49□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Ankrd50F7BE84 1390 aa13.49□□□□□ -0.25
Rnf40-206ENSMUST00000206914 G3bp1P97855 465 aaKnown RBP13.49□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Slc52a2Q9D8F3 450 aa13.49□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Uhrf1bp1B2KF50 1429 aa13.48□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Cdc42bpgQ80UW5 1551 aa13.48□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Depdc5P61460 1591 aa13.48□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Chd1P40201 1711 aa13.48□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Lrrc7Q80TE7 1490 aa13.48□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Nrxn1Q9CS84 1514 aa13.47□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Prex1Q69ZK0 1650 aa13.47□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Rfx1P48377 963 aa13.47□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Tecpr2Q3UH45 1423 aa13.47□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Ift172Q6VH22 1749 aa13.47□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Kiaa0556Q8C753 1610 aa13.46□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Tpm2P58774 284 aa13.46□□□□□ -0.25
Rnf40-206ENSMUST00000206914 Nsfl1cQ9CZ44 370 aaKnown RBP13.46□□□□□ -0.25
Rnf40-206ENSMUST00000206914 SlkO54988 1233 aa13.46□□□□□ -0.25
Rnf40-206ENSMUST00000206914 LifrP42703 1092 aa13.46□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Topbp1Q6ZQF0 1515 aa13.45□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Exosc9Q9JHI7 438 aaKnown RBP13.45□□□□□ -0.26
Rnf40-206ENSMUST00000206914 DekQ7TNV0 380 aaKnown RBP13.45□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Znf330Q922H9 316 aa13.45□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Wdr63B2RY71 923 aa13.44□□□□□ -0.26
Rnf40-206ENSMUST00000206914 PogkQ80TC5 607 aa13.44□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Pik3r4Q8VD65 1358 aa13.44□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Akap12Q9WTQ5 1684 aa13.44□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Naip7Q9JIB3 1402 aa13.44□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Fchsd2Q3USJ8 740 aa13.44□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Cgnl1Q6AW69 1298 aa13.44□□□□□ -0.26
Rnf40-206ENSMUST00000206914 1700010I14RikQ7TPG0 532 aa13.44□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Clcn1Q64347 994 aa13.43□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Aldh1l1Q8R0Y6 902 aa13.43□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Swt1Q9DBQ9 907 aa13.43□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Casq1O09165 405 aa13.43□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Znf692Q3U381 531 aa13.42□□□□□ -0.26
Rnf40-206ENSMUST00000206914 MvpQ9EQK5 861 aa13.42□□□□□ -0.26
Rnf40-206ENSMUST00000206914 ScaperF8VQ70 1398 aaKnown RBP13.42□□□□□ -0.26
Rnf40-206ENSMUST00000206914 AU022751B1B0V2 589 aa13.41□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Tbc1d9Q3UYK3 1264 aa13.41□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Tex2Q6ZPJ0 1128 aaKnown RBP13.41□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Rtn4Q99P72 1162 aaKnown RBP13.41□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Tfip11Q9ERA6 838 aaKnown RBP13.41□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Prdm2A2A7B5 1709 aaKnown RBP13.4□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Atp7bQ64446 1462 aa13.4□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Ankrd44B2RXR6 993 aa13.4□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Pdcl2Q78Y63 240 aa13.4□□□□□ -0.26
Rnf40-206ENSMUST00000206914 Plekhm2Q80TQ5 1018 aa13.39□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Nek4Q9Z1J2 792 aa13.39□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Usp32F8VPZ3 1604 aa13.39□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Anapc15-psA0A140T8L6 141 aa13.39□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Tmx3Q8BXZ1 456 aa13.39□□□□□ -0.27
Rnf40-206ENSMUST00000206914 PtmsQ9D0J8 101 aaKnown RBP13.39□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Q3UPC7 1272 aa13.39□□□□□ -0.27
Rnf40-206ENSMUST00000206914 HnrnpuQ8VEK3 800 aaKnown RBP13.39□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Bag4Q8CI61 457 aa13.38□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Tmco5bQ80X59 307 aa13.38□□□□□ -0.27
Rnf40-206ENSMUST00000206914 CarsQ9ER72 831 aaKnown RBP13.38□□□□□ -0.27
Rnf40-206ENSMUST00000206914 GorabQ8BRM2 368 aa13.37□□□□□ -0.27
Rnf40-206ENSMUST00000206914 ImpactO55091 318 aa13.37□□□□□ -0.27
Rnf40-206ENSMUST00000206914 VgfQ0VGU4 617 aa13.37□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Nutm1Q8BHP2 1126 aa13.37□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Nsd3Q6P2L6 1439 aa13.37□□□□□ -0.27
Rnf40-206ENSMUST00000206914 CenppQ9CZ92 286 aa13.37□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Rangap1P46061 589 aaKnown RBP13.36□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Mcm2P97310 904 aa13.36□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Dhx16G3X8X0 1044 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms