RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Atad2bE9Q166 1460 aaKnown RBP17.02■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Cnnm3Q32NY4 713 aa17.01■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Dhx16G3X8X0 1044 aaKnown RBP17.01■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Phldb2Q8K1N2 1249 aa17.01■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 SelenooQ9DBC0 667 aa17.01■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Gtf2f1Q3THK3 508 aaKnown RBP17■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Prdm16A2A935 1275 aa17■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Shroom4Q1W617 1475 aa17■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Pip4k2aO70172 405 aa17■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Babam1Q3UI43 333 aa16.99■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Kiaa0753Q6A000 959 aa16.99■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Zfp644E9QA22 1323 aa16.99■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Odf2lQ9D478 642 aa16.99■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Mctp1E9PV86 951 aa16.99■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Spag5Q7TME2 1165 aa16.99■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Mphosph10Q810V0 681 aaKnown RBP16.99■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Nup88Q8CEC0 753 aaKnown RBP16.99■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Mcm4P49717 862 aa16.98■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 UvssaQ9D479 717 aa16.98■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Apaf1O88879 1249 aa16.98■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Rsph6aQ8CDR2 708 aa16.98■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 OptnQ8K3K8 584 aa16.98■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Pde4cQ3UEI1 686 aa16.98■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Jakmip1Q8BVL9 626 aa16.98■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Cavin1O54724 392 aa16.97■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Lrrcc1Q69ZB0 1026 aa16.97■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 SrrtQ99MR6 875 aaKnown RBP16.97■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Eif3aP23116 1344 aaKnown RBP16.97■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 ImpactO55091 318 aa16.97■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Sycp1Q62209 993 aa16.97■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Syce3B5KM66 88 aa16.96■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Cep57l1Q8VDS7 400 aa16.96■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Ttll5Q8CHB8 1328 aa16.96■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Cfap58B2RW38 873 aa16.96■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Ift57Q8BXG3 429 aa16.96■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 Cd109Q8R422 1442 aa16.96■□□□□ 0.31
Pcdha8-201ENSMUST00000194038 CenpqQ9CPQ5 267 aa16.95■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 DmtnQ9WV69 405 aa16.95■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Ppp6r1Q7TSI3 856 aa16.95■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 CarsQ9ER72 831 aaKnown RBP16.95■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Arhgef5E9Q7D5 1581 aa16.95■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Jakmip2D3YXK0 820 aa16.95■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Rbm28Q8CGC6 750 aaKnown RBP16.95■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Ccdc83Q9D4V3 305 aa16.95■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 ItpripQ3TNL8 555 aa16.94■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 ScribQ80U72 1612 aa16.94■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Pdcl2Q78Y63 240 aa16.94■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Smc5Q8CG46 1101 aaKnown RBP16.94■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 L3mbtl2P59178 703 aa16.94■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Dusp27Q148W8 1138 aa16.94■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Ppip5k2Q6ZQB6 1129 aa16.93■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Erlin2Q8BFZ9 340 aa16.93■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Map9Q3TRR0 646 aa16.93■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Luc7lQ9CYI4 371 aaKnown RBP16.93■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Hs1bp3Q3TC93 395 aa16.93■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 MicalclQ9D5U9 680 aa16.93■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Atp2b2Q9R0K7 1198 aa16.93■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Slu7Q8BHJ9 585 aa16.92■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Rhot2Q8JZN7 620 aa16.92■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Frmd3Q8BHD4 595 aa16.92■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Jph4Q80WT0 628 aa16.92■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 MvpQ9EQK5 861 aa16.92■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Samm50Q8BGH2 469 aa16.92■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Tfip11Q9ERA6 838 aaKnown RBP16.92■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Wwc1Q5SXA9 1104 aa16.91■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 TxlnbQ8VBT1 685 aa16.91■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Arap1Q4LDD4 1452 aa16.91■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Tango6Q8C3S2 1079 aa16.91■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Hvcn1Q3U2S8 269 aa16.9■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Prpf4bQ61136 1007 aaKnown RBP16.9■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 HypkQ9CR41 129 aa16.9■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Wdr33Q8K4P0 1330 aaKnown RBP16.9■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Lamb3Q61087 1168 aa16.9■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Ccdc96Q9CR92 584 aa16.9■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Gnl3lQ6PGG6 577 aaKnown RBP16.9■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Ppp1r9bQ6R891 817 aaKnown RBP16.9■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Rcan3Q9JKK0 239 aa16.9■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Fyb1O35601 819 aa16.89■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Cbx1P83917 185 aaKnown RBP16.89■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Gse1Q3U3C9 1213 aa16.89■□□□□ 0.3
Pcdha8-201ENSMUST00000194038 Cdc45Q9Z1X9 566 aa16.89■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Znf692Q3U381 531 aa16.89■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Fchsd2Q3USJ8 740 aa16.89■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Top1mtQ8R4U6 593 aa16.89■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Tmc1Q8R4P5 757 aa16.89■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 CenphQ9QYM8 241 aa16.89■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 TimelessQ9R1X4 1197 aa16.88■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Stim1P70302 685 aa16.88■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Agtpbp1Q641K1 1218 aa16.88■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 PsapQ61207 557 aaKnown RBP16.88■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Abcd1P48410 736 aa16.87■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Srgap3Q812A2 1099 aa16.87■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Trim30cD3YVI9 513 aa16.87■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Ccar2Q8VDP4 922 aaKnown RBP16.87■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Cwc27Q3TKY6 469 aa16.87■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Ppp4r3bQ922R5 820 aa16.87■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 NinlQ6ZQ12 1394 aa16.86■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Cdc37l1Q9CZP7 335 aa16.86■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Cfap45Q9D9U9 551 aa16.86■□□□□ 0.29
Pcdha8-201ENSMUST00000194038 Eif5P59325 429 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms