RNA–Protein interactions for RNA: ENSMUST00000173600.1

Ltb-203, Transcript of Lymphotoxin-beta, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ltb, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-203ENSMUST00000173600 CenpjQ569L8 1344 aa29.96■■■□□ 2.39
Ltb-203ENSMUST00000173600 Nfat5Q9WV30 1534 aa29.96■■■□□ 2.39
Ltb-203ENSMUST00000173600 PaskQ8CEE6 1383 aa29.96■■■□□ 2.39
Ltb-203ENSMUST00000173600 Slc34a2Q9DBP0 697 aa29.96■■■□□ 2.39
Ltb-203ENSMUST00000173600 Shank2Q80Z38 1476 aa29.93■■■□□ 2.38
Ltb-203ENSMUST00000173600 Ccdc6D3YZP9 469 aa29.93■■■□□ 2.38
Ltb-203ENSMUST00000173600 Srcin1Q9QWI6 1250 aa29.92■■■□□ 2.38
Ltb-203ENSMUST00000173600 Pola1P33609 1465 aa29.92■■■□□ 2.38
Ltb-203ENSMUST00000173600 Sbno1Q689Z5 1390 aa29.91■■■□□ 2.38
Ltb-203ENSMUST00000173600 Ltbp1Q8CG19 1712 aa29.91■■■□□ 2.38
Ltb-203ENSMUST00000173600 Tet3Q8BG87 1668 aa29.91■■■□□ 2.38
Ltb-203ENSMUST00000173600 Gsto1O09131 240 aa29.9■■■□□ 2.38
Ltb-203ENSMUST00000173600 Stard8Q8K031 1019 aa29.9■■■□□ 2.38
Ltb-203ENSMUST00000173600 Dzip1Q8BMD2 852 aa29.89■■■□□ 2.38
Ltb-203ENSMUST00000173600 TimelessQ9R1X4 1197 aa29.89■■■□□ 2.38
Ltb-203ENSMUST00000173600 Bcl9lQ67FY2 1494 aa29.88■■■□□ 2.37
Ltb-203ENSMUST00000173600 Sf3b2Q3UJB0 878 aaKnown RBP29.88■■■□□ 2.37
Ltb-203ENSMUST00000173600 Rtl5Q5DTT4 599 aa29.87■■■□□ 2.37
Ltb-203ENSMUST00000173600 Zmym3Q9JLM4 1370 aa29.86■■■□□ 2.37
Ltb-203ENSMUST00000173600 Idi2Q8BFZ6 227 aa29.84■■■□□ 2.37
Ltb-203ENSMUST00000173600 ZgpatQ8VDM1 511 aa29.84■■■□□ 2.37
Ltb-203ENSMUST00000173600 Frmpd2A0A140LI67 1392 aa29.82■■■□□ 2.36
Ltb-203ENSMUST00000173600 Map3k19E9Q3S4 1311 aa29.82■■■□□ 2.36
Ltb-203ENSMUST00000173600 Nid2O88322 1403 aa29.81■■■□□ 2.36
Ltb-203ENSMUST00000173600 Tnks1bp1P58871 1720 aa29.81■■■□□ 2.36
Ltb-203ENSMUST00000173600 Card11Q8CIS0 1159 aa29.8■■■□□ 2.36
Ltb-203ENSMUST00000173600 Robo1O89026 1612 aa29.8■■■□□ 2.36
Ltb-203ENSMUST00000173600 Cacna1sQ02789 1880 aa29.79■■■□□ 2.36
Ltb-203ENSMUST00000173600 CatipB9EKE5 520 aa29.79■■■□□ 2.36
Ltb-203ENSMUST00000173600 Exosc9Q9JHI7 438 aaKnown RBP29.79■■■□□ 2.36
Ltb-203ENSMUST00000173600 Sugp2Q8CH09 1067 aa29.78■■■□□ 2.36
Ltb-203ENSMUST00000173600 HdgfP51859 237 aaKnown RBP29.77■■■□□ 2.36
Ltb-203ENSMUST00000173600 FanciQ8K368 1330 aa29.76■■■□□ 2.36
Ltb-203ENSMUST00000173600 Ccdc129Q14B48 1034 aa29.76■■■□□ 2.35
Ltb-203ENSMUST00000173600 Rundc1Q0VDN7 615 aa29.75■■■□□ 2.35
Ltb-203ENSMUST00000173600 Ncapd2Q8K2Z4 1392 aa29.72■■■□□ 2.35
Ltb-203ENSMUST00000173600 Gm21698A0A087WQP8 267 aa29.71■■■□□ 2.35
Ltb-203ENSMUST00000173600 Gm21671G3UY31 267 aa29.71■■■□□ 2.35
Ltb-203ENSMUST00000173600 OscarQ8VBT3 265 aa29.71■■■□□ 2.35
Ltb-203ENSMUST00000173600 Rock2P70336 1388 aa29.71■■■□□ 2.35
Ltb-203ENSMUST00000173600 Ubap1lG3UW59 384 aa29.69■■■□□ 2.34
Ltb-203ENSMUST00000173600 Pard3Q99NH2 1333 aa29.69■■■□□ 2.34
Ltb-203ENSMUST00000173600 InsrP15208 1372 aa29.68■■■□□ 2.34
Ltb-203ENSMUST00000173600 Fer1l6E0CZ42 1862 aa29.68■■■□□ 2.34
Ltb-203ENSMUST00000173600 Gimap6Q8K349 305 aa29.67■■■□□ 2.34
Ltb-203ENSMUST00000173600 Cnga1P29974 684 aa29.66■■■□□ 2.34
Ltb-203ENSMUST00000173600 Kiaa0319Q5SZV5 1081 aa29.66■■■□□ 2.34
Ltb-203ENSMUST00000173600 Ly75Q60767 1723 aa29.64■■■□□ 2.34
Ltb-203ENSMUST00000173600 TonslQ6NZL6 1363 aa29.64■■■□□ 2.33
Ltb-203ENSMUST00000173600 Adamtsl1Q8BLI0 1745 aa29.63■■■□□ 2.33
Ltb-203ENSMUST00000173600 Mast2Q60592 1734 aa29.62■■■□□ 2.33
Ltb-203ENSMUST00000173600 Ncoa4Q5U4H9 625 aa29.61■■■□□ 2.33
Ltb-203ENSMUST00000173600 Znf335A2A5K6 1337 aa29.61■■■□□ 2.33
Ltb-203ENSMUST00000173600 Kif16bB1AVY7 1312 aa29.59■■■□□ 2.33
Ltb-203ENSMUST00000173600 Nup153E9Q3G8 1462 aaKnown RBP29.59■■■□□ 2.33
Ltb-203ENSMUST00000173600 Gm21190A0A0G2JGJ6 266 aa29.57■■■□□ 2.32
Ltb-203ENSMUST00000173600 Slx1bQ8BX32 270 aa29.55■■■□□ 2.32
Ltb-203ENSMUST00000173600 VirmaA2AIV2 1811 aaKnown RBP29.55■■■□□ 2.32
Ltb-203ENSMUST00000173600 Nckap5lQ6GQX2 1323 aa29.52■■■□□ 2.32
Ltb-203ENSMUST00000173600 Dennd6aQ8BH65 605 aa29.52■■■□□ 2.32
Ltb-203ENSMUST00000173600 Taok3Q8BYC6 898 aa29.52■■■□□ 2.32
Ltb-203ENSMUST00000173600 Pm20d1Q8C165 503 aa29.52■■■□□ 2.32
Ltb-203ENSMUST00000173600 Kat6bQ8BRB7 1872 aa29.51■■■□□ 2.31
Ltb-203ENSMUST00000173600 Card10P58660 1021 aa29.51■■■□□ 2.31
Ltb-203ENSMUST00000173600 Zeb2Q9R0G7 1215 aa29.5■■■□□ 2.31
Ltb-203ENSMUST00000173600 Ppargc1bQ8VHJ7 1014 aa29.49■■■□□ 2.31
Ltb-203ENSMUST00000173600 Nlgn1Q99K10 843 aa29.49■■■□□ 2.31
Ltb-203ENSMUST00000173600 Dnajc10Q9DC23 793 aa29.48■■■□□ 2.31
Ltb-203ENSMUST00000173600 TnrQ8BYI9 1358 aa29.48■■■□□ 2.31
Ltb-203ENSMUST00000173600 Amotl2Q8K371 772 aa29.47■■■□□ 2.31
Ltb-203ENSMUST00000173600 Akap11E9Q777 1895 aa29.44■■■□□ 2.3
Ltb-203ENSMUST00000173600 Chd4Q6PDQ2 1915 aaKnown RBP29.44■■■□□ 2.3
Ltb-203ENSMUST00000173600 Kcnh5Q920E3 988 aa29.43■■■□□ 2.3
Ltb-203ENSMUST00000173600 Ppp6r1Q7TSI3 856 aa29.4■■■□□ 2.3
Ltb-203ENSMUST00000173600 Cabp4Q8VHC5 271 aa29.4■■■□□ 2.3
Ltb-203ENSMUST00000173600 Astn2Q80Z10 1352 aa29.39■■■□□ 2.29
Ltb-203ENSMUST00000173600 RgmbQ7TQ33 436 aa29.38■■■□□ 2.29
Ltb-203ENSMUST00000173600 Ubr1O70481 1757 aa29.38■■■□□ 2.29
Ltb-203ENSMUST00000173600 Nwd2Q6P5U7 1742 aa29.37■■■□□ 2.29
Ltb-203ENSMUST00000173600 Fmnl2A2APV2 1086 aa29.37■■■□□ 2.29
Ltb-203ENSMUST00000173600 TatQ8QZR1 454 aa29.37■■■□□ 2.29
Ltb-203ENSMUST00000173600 4930523C07RikE9Q2T4 99 aa29.36■■■□□ 2.29
Ltb-203ENSMUST00000173600 Rpgrip1Q9EPQ2 1331 aa29.36■■■□□ 2.29
Ltb-203ENSMUST00000173600 Mdc1Q5PSV9 1707 aa29.36■■■□□ 2.29
Ltb-203ENSMUST00000173600 Cdk12Q14AX6 1484 aaKnown RBP29.36■■■□□ 2.29
Ltb-203ENSMUST00000173600 Prdm10Q3UTQ7 1184 aa29.33■■■□□ 2.29
Ltb-203ENSMUST00000173600 FancaQ9JL70 1439 aa29.32■■■□□ 2.28
Ltb-203ENSMUST00000173600 NefmP08553 848 aa29.32■■■□□ 2.28
Ltb-203ENSMUST00000173600 Scn7aB1AYL1 1681 aa29.31■■■□□ 2.28
Ltb-203ENSMUST00000173600 Map2P20357 1828 aa29.31■■■□□ 2.28
Ltb-203ENSMUST00000173600 GakQ99KY4 1305 aa29.3■■■□□ 2.28
Ltb-203ENSMUST00000173600 Nol11Q8BJW5 723 aaKnown RBP29.3■■■□□ 2.28
Ltb-203ENSMUST00000173600 Uhrf1bp1lA2RSJ4 1457 aa29.29■■■□□ 2.28
Ltb-203ENSMUST00000173600 Pak3Q61036 559 aa29.26■■■□□ 2.27
Ltb-203ENSMUST00000173600 Kcna3P16390 528 aa29.25■■■□□ 2.27
Ltb-203ENSMUST00000173600 Tmem132eQ6IEE6 982 aa29.25■■■□□ 2.27
Ltb-203ENSMUST00000173600 Ano8Q6PB70 1060 aa29.25■■■□□ 2.27
Ltb-203ENSMUST00000173600 Ankrd23Q812A3 306 aa29.25■■■□□ 2.27
Ltb-203ENSMUST00000173600 CemipQ8BI06 1361 aa29.25■■■□□ 2.27
Ltb-203ENSMUST00000173600 Apba2P98084 750 aa29.24■■■□□ 2.27
Retrieved 100 of 22,080 RNA–protein pairs in 65.8 ms