RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 TimelessQ9R1X4 1197 aa31.37■■■□□ 2.61
Shox2-204ENSMUST00000162439 PaskQ8CEE6 1383 aa31.37■■■□□ 2.61
Shox2-204ENSMUST00000162439 Nfat5Q9WV30 1534 aa31.36■■■□□ 2.61
Shox2-204ENSMUST00000162439 Shank2Q80Z38 1476 aa31.36■■■□□ 2.61
Shox2-204ENSMUST00000162439 Gsto1O09131 240 aa31.36■■■□□ 2.61
Shox2-204ENSMUST00000162439 Sf3b2Q3UJB0 878 aaKnown RBP31.36■■■□□ 2.61
Shox2-204ENSMUST00000162439 Stard8Q8K031 1019 aa31.36■■■□□ 2.61
Shox2-204ENSMUST00000162439 Srcin1Q9QWI6 1250 aa31.35■■■□□ 2.61
Shox2-204ENSMUST00000162439 Zmym3Q9JLM4 1370 aa31.34■■■□□ 2.61
Shox2-204ENSMUST00000162439 Rtl5Q5DTT4 599 aa31.34■■■□□ 2.61
Shox2-204ENSMUST00000162439 Dzip1Q8BMD2 852 aa31.33■■■□□ 2.61
Shox2-204ENSMUST00000162439 ZgpatQ8VDM1 511 aa31.33■■■□□ 2.61
Shox2-204ENSMUST00000162439 Idi2Q8BFZ6 227 aa31.32■■■□□ 2.6
Shox2-204ENSMUST00000162439 Ltbp1Q8CG19 1712 aa31.32■■■□□ 2.6
Shox2-204ENSMUST00000162439 Sbno1Q689Z5 1390 aa31.31■■■□□ 2.6
Shox2-204ENSMUST00000162439 Pola1P33609 1465 aa31.28■■■□□ 2.6
Shox2-204ENSMUST00000162439 Bcl9lQ67FY2 1494 aa31.28■■■□□ 2.6
Shox2-204ENSMUST00000162439 Ccdc6D3YZP9 469 aa31.28■■■□□ 2.6
Shox2-204ENSMUST00000162439 Ccdc129Q14B48 1034 aa31.26■■■□□ 2.59
Shox2-204ENSMUST00000162439 Map3k19E9Q3S4 1311 aa31.25■■■□□ 2.59
Shox2-204ENSMUST00000162439 HdgfP51859 237 aaKnown RBP31.24■■■□□ 2.59
Shox2-204ENSMUST00000162439 Card11Q8CIS0 1159 aa31.24■■■□□ 2.59
Shox2-204ENSMUST00000162439 CatipB9EKE5 520 aa31.23■■■□□ 2.59
Shox2-204ENSMUST00000162439 Sugp2Q8CH09 1067 aa31.23■■■□□ 2.59
Shox2-204ENSMUST00000162439 Frmpd2A0A140LI67 1392 aa31.21■■■□□ 2.59
Shox2-204ENSMUST00000162439 Tet3Q8BG87 1668 aa31.21■■■□□ 2.59
Shox2-204ENSMUST00000162439 Tnks1bp1P58871 1720 aa31.21■■■□□ 2.59
Shox2-204ENSMUST00000162439 Nid2O88322 1403 aa31.19■■■□□ 2.58
Shox2-204ENSMUST00000162439 Exosc9Q9JHI7 438 aaKnown RBP31.19■■■□□ 2.58
Shox2-204ENSMUST00000162439 Rundc1Q0VDN7 615 aa31.18■■■□□ 2.58
Shox2-204ENSMUST00000162439 Kdm2bQ6P1G2 1309 aa31.18■■■□□ 2.58
Shox2-204ENSMUST00000162439 Ncapd2Q8K2Z4 1392 aa31.17■■■□□ 2.58
Shox2-204ENSMUST00000162439 Cacna1sQ02789 1880 aa31.17■■■□□ 2.58
Shox2-204ENSMUST00000162439 FanciQ8K368 1330 aa31.16■■■□□ 2.58
Shox2-204ENSMUST00000162439 Pard3Q99NH2 1333 aa31.15■■■□□ 2.58
Shox2-204ENSMUST00000162439 Gm21698A0A087WQP8 267 aa31.14■■■□□ 2.58
Shox2-204ENSMUST00000162439 Gm21671G3UY31 267 aa31.14■■■□□ 2.58
Shox2-204ENSMUST00000162439 Kiaa0319Q5SZV5 1081 aa31.14■■■□□ 2.58
Shox2-204ENSMUST00000162439 Gimap6Q8K349 305 aa31.13■■■□□ 2.57
Shox2-204ENSMUST00000162439 Robo1O89026 1612 aa31.12■■■□□ 2.57
Shox2-204ENSMUST00000162439 Fer1l6E0CZ42 1862 aa31.11■■■□□ 2.57
Shox2-204ENSMUST00000162439 Ncoa4Q5U4H9 625 aa31.11■■■□□ 2.57
Shox2-204ENSMUST00000162439 TonslQ6NZL6 1363 aa31.09■■■□□ 2.57
Shox2-204ENSMUST00000162439 Znf335A2A5K6 1337 aa31.09■■■□□ 2.57
Shox2-204ENSMUST00000162439 Ubap1lG3UW59 384 aa31.08■■■□□ 2.57
Shox2-204ENSMUST00000162439 Cnga1P29974 684 aa31.06■■■□□ 2.56
Shox2-204ENSMUST00000162439 InsrP15208 1372 aa31.05■■■□□ 2.56
Shox2-204ENSMUST00000162439 Rock2P70336 1388 aa31.05■■■□□ 2.56
Shox2-204ENSMUST00000162439 Adamtsl1Q8BLI0 1745 aa31.04■■■□□ 2.56
Shox2-204ENSMUST00000162439 Slx1bQ8BX32 270 aa31.04■■■□□ 2.56
Shox2-204ENSMUST00000162439 Ly75Q60767 1723 aa31.04■■■□□ 2.56
Shox2-204ENSMUST00000162439 Mast2Q60592 1734 aa31.01■■■□□ 2.56
Shox2-204ENSMUST00000162439 Pm20d1Q8C165 503 aa31.01■■■□□ 2.55
Shox2-204ENSMUST00000162439 Kif16bB1AVY7 1312 aa30.99■■■□□ 2.55
Shox2-204ENSMUST00000162439 Nup153E9Q3G8 1462 aaKnown RBP30.99■■■□□ 2.55
Shox2-204ENSMUST00000162439 Card10P58660 1021 aa30.98■■■□□ 2.55
Shox2-204ENSMUST00000162439 Nckap5lQ6GQX2 1323 aa30.98■■■□□ 2.55
Shox2-204ENSMUST00000162439 Gm21190A0A0G2JGJ6 266 aa30.97■■■□□ 2.55
Shox2-204ENSMUST00000162439 Taok3Q8BYC6 898 aa30.95■■■□□ 2.55
Shox2-204ENSMUST00000162439 Nlgn1Q99K10 843 aa30.95■■■□□ 2.55
Shox2-204ENSMUST00000162439 Dennd6aQ8BH65 605 aa30.94■■■□□ 2.54
Shox2-204ENSMUST00000162439 Amotl2Q8K371 772 aa30.94■■■□□ 2.54
Shox2-204ENSMUST00000162439 Zeb2Q9R0G7 1215 aa30.94■■■□□ 2.54
Shox2-204ENSMUST00000162439 OscarQ8VBT3 265 aa30.92■■■□□ 2.54
Shox2-204ENSMUST00000162439 Dnajc10Q9DC23 793 aa30.92■■■□□ 2.54
Shox2-204ENSMUST00000162439 Kat6bQ8BRB7 1872 aa30.9■■■□□ 2.54
Shox2-204ENSMUST00000162439 4930523C07RikE9Q2T4 99 aa30.89■■■□□ 2.54
Shox2-204ENSMUST00000162439 VirmaA2AIV2 1811 aaKnown RBP30.89■■■□□ 2.53
Shox2-204ENSMUST00000162439 Ppargc1bQ8VHJ7 1014 aa30.88■■■□□ 2.53
Shox2-204ENSMUST00000162439 Kcnh5Q920E3 988 aa30.88■■■□□ 2.53
Shox2-204ENSMUST00000162439 Ppp6r1Q7TSI3 856 aa30.86■■■□□ 2.53
Shox2-204ENSMUST00000162439 Akap11E9Q777 1895 aa30.86■■■□□ 2.53
Shox2-204ENSMUST00000162439 TnrQ8BYI9 1358 aa30.85■■■□□ 2.53
Shox2-204ENSMUST00000162439 RgmbQ7TQ33 436 aa30.85■■■□□ 2.53
Shox2-204ENSMUST00000162439 Chd4Q6PDQ2 1915 aaKnown RBP30.85■■■□□ 2.53
Shox2-204ENSMUST00000162439 Cabp4Q8VHC5 271 aa30.83■■■□□ 2.53
Shox2-204ENSMUST00000162439 Fmnl2A2APV2 1086 aa30.8■■■□□ 2.52
Shox2-204ENSMUST00000162439 TatQ8QZR1 454 aa30.79■■■□□ 2.52
Shox2-204ENSMUST00000162439 Astn2Q80Z10 1352 aa30.75■■■□□ 2.51
Shox2-204ENSMUST00000162439 GakQ99KY4 1305 aa30.73■■■□□ 2.51
Shox2-204ENSMUST00000162439 Ano8Q6PB70 1060 aa30.72■■■□□ 2.51
Shox2-204ENSMUST00000162439 Ankrd23Q812A3 306 aa30.72■■■□□ 2.51
Shox2-204ENSMUST00000162439 Nol11Q8BJW5 723 aaKnown RBP30.72■■■□□ 2.51
Shox2-204ENSMUST00000162439 Cdk12Q14AX6 1484 aaKnown RBP30.71■■■□□ 2.51
Shox2-204ENSMUST00000162439 Ubr1O70481 1757 aa30.71■■■□□ 2.51
Shox2-204ENSMUST00000162439 Nwd2Q6P5U7 1742 aa30.7■■■□□ 2.51
Shox2-204ENSMUST00000162439 Vps33bP59016 617 aa30.7■■■□□ 2.51
Shox2-204ENSMUST00000162439 Apba2P98084 750 aa30.7■■■□□ 2.51
Shox2-204ENSMUST00000162439 Tmem132eQ6IEE6 982 aa30.68■■■□□ 2.5
Shox2-204ENSMUST00000162439 Prdm10Q3UTQ7 1184 aa30.67■■■□□ 2.5
Shox2-204ENSMUST00000162439 Pak3Q61036 559 aa30.67■■■□□ 2.5
Shox2-204ENSMUST00000162439 Uhrf1bp1lA2RSJ4 1457 aa30.66■■■□□ 2.5
Shox2-204ENSMUST00000162439 Lrit1Q8K099 624 aa30.66■■■□□ 2.5
Shox2-204ENSMUST00000162439 Rpgrip1Q9EPQ2 1331 aa30.66■■■□□ 2.5
Shox2-204ENSMUST00000162439 CemipQ8BI06 1361 aa30.66■■■□□ 2.5
Shox2-204ENSMUST00000162439 CrklP47941 303 aa30.65■■■□□ 2.5
Shox2-204ENSMUST00000162439 Map2P20357 1828 aa30.64■■■□□ 2.5
Shox2-204ENSMUST00000162439 GalcP54818 684 aa30.64■■■□□ 2.5
Shox2-204ENSMUST00000162439 Ddb1Q3U1J4 1140 aaKnown RBP30.64■■■□□ 2.5
Shox2-204ENSMUST00000162439 OptnQ8K3K8 584 aa30.64■■■□□ 2.5
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms