RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Chd2E9PZM4 1827 aaKnown RBP17.55■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Hs1bp3Q3TC93 395 aa17.55■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Nlrp6Q91WS2 869 aa17.55■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Srcin1Q9QWI6 1250 aa17.55■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Map4k4P97820 1233 aaKnown RBP17.54■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Kif7B7ZNG0 1348 aa17.54■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Adgrb3Q80ZF8 1522 aa17.54■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Kif2cQ922S8 721 aa17.53■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Iqsec2Q5DU25 1478 aa17.53■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Ddit3P35639 168 aa17.52■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Tulp4Q9JIL5 1547 aa17.52■□□□□ 0.4
Hoxc4-201ENSMUST00000100164 Akap12Q9WTQ5 1684 aa17.52■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Kiaa1107Q80TK0 1369 aa17.52■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Rapgef3Q8VCC8 918 aa17.51■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Gas2l2Q5SSG4 860 aa17.51■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 PzpQ61838 1495 aa17.51■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Tmem131lQ3U3D7 1597 aa17.5■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Ttc21bQ0HA38 1315 aa17.49■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Gprasp1Q5U4C1 1347 aa17.49■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Ncapd2Q8K2Z4 1392 aa17.49■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Plcb2A3KGF7 1181 aa17.49■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Map7O88735 730 aa17.49■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Gemin5Q8BX17 1502 aaKnown RBP17.49■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Rsph3aQ3UFY4 516 aa17.48■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Pdcl2Q78Y63 240 aa17.48■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Gli3Q61602 1583 aa17.48■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Edc4Q3UJB9 1406 aaKnown RBP17.48■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Rbm25B2RY56 838 aaKnown RBP17.47■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Mfap1aC0HKD8 439 aaKnown RBP17.47■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Mfap1bC0HKD9 439 aaKnown RBP17.47■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Nsd2Q8BVE8 1365 aa17.47■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Dhx16G3X8X0 1044 aaKnown RBP17.46■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Ncbp3Q8BZR9 615 aaKnown RBP17.46■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Armcx1Q9CX83 456 aa17.46■□□□□ 0.39
Hoxc4-201ENSMUST00000100164 Skint5A7XUY5 1461 aa17.46■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Gm10093D3YYI8 482 aa17.44■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Hdac1O09106 482 aaKnown RBP17.44■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Nrxn3Q6P9K9 1571 aa17.44■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Lmtk3Q5XJV6 1424 aa17.44■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Pnmal2G3X9N3 661 aa17.44■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 SlkO54988 1233 aa17.44■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Myom1Q62234 1667 aaKnown RBP17.44■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Gse1Q3U3C9 1213 aa17.43■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 ScaperF8VQ70 1398 aaKnown RBP17.43■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 VgfQ0VGU4 617 aa17.42■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Ino80Q6ZPV2 1559 aa17.42■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 KdrP35918 1367 aa17.41■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Ripk4Q9ERK0 786 aa17.41■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Stard8Q8K031 1019 aa17.4■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Tecpr2Q3UH45 1423 aa17.4■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Itsn1Q9Z0R4 1714 aa17.4■□□□□ 0.38
Hoxc4-201ENSMUST00000100164 Kdm4cQ8VCD7 1054 aa17.39■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Nsfl1cQ9CZ44 370 aaKnown RBP17.39■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Efcab6Q6P1E8 1516 aa17.38■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Cep152A2AUM9 1736 aaKnown RBP17.38■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Kif13aQ9EQW7 1749 aa17.37■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Ccar1Q8CH18 1146 aaKnown RBP17.37■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Kif18aQ91WD7 886 aa17.37■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Uggt1Q6P5E4 1551 aa17.37■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Zc3h13E9Q784 1729 aaKnown RBP17.37■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Med1Q925J9 1575 aa17.37■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Lekr1B2RVN1 116 aa17.37■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Pdia4P08003 638 aaKnown RBP17.37■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Atxn3Q9CVD2 355 aa17.37■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Ush1cQ9ES64 910 aa17.37■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Naip7Q9JIB3 1402 aa17.36■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Irf5P56477 497 aa17.36■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Txndc2Q6P902 515 aa17.36■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Fez1Q8K0X8 392 aa17.36■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 KnstrnQ9D9Z1 312 aaKnown RBP17.36■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Hspa1lP16627 641 aa17.35■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Tmx3Q8BXZ1 456 aa17.35■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Rbm10Q99KG3 930 aaKnown RBP17.35■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 IbtkQ6ZPR6 1352 aaKnown RBP17.34■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Erbb4Q61527 1308 aa17.34■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Ksr2Q3UVC0 959 aa17.33■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Gtf2e1Q9D0D5 440 aa17.33■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 GsdmaQ9EST1 446 aa17.33■□□□□ 0.37
Hoxc4-201ENSMUST00000100164 Rfx1P48377 963 aa17.33■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 SkilQ60665 675 aa17.33■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Cluap1Q8R3P7 413 aa17.32■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 AU019823E9PUQ3 292 aa17.31■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Brd1E9PZ26 1189 aaKnown RBP17.31■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Mknk2Q8CDB0 459 aa17.31■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Iqgap3F8VQ29 1632 aa17.31■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Kdm2aP59997 1161 aa17.31■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 DekQ7TNV0 380 aaKnown RBP17.31■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Polr3glQ8R0C0 218 aa17.31■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Nphp4P59240 1425 aa17.31■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Eif2ak4Q9QZ05 1648 aa17.3■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Becn1O88597 448 aa17.3■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Ecm2Q5FW85 670 aa17.3■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 PalldQ9ET54 1408 aa17.3■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Zfp91Q62511 572 aa17.29■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Cog6Q8R3I3 657 aa17.29■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Prdm2A2A7B5 1709 aaKnown RBP17.28■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Gm20521D3Z5F7 333 aa17.28■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 ImpactO55091 318 aa17.28■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Adgrl1Q80TR1 1466 aa17.28■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Wwc1Q5SXA9 1104 aa17.28■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms