RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Kif4P33174 1231 aa18.21■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Tmc1Q8R4P5 757 aa18.21■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 PogkQ80TC5 607 aa18.21■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Smc2Q8CG48 1191 aaKnown RBP18.2■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Kif16bB1AVY7 1312 aa18.2■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Nek4Q9Z1J2 792 aa18.2■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Efcab5A0JP43 1406 aa18.2■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Gm14025A2AP89 1413 aa18.2■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Ccdc141E9Q8Q6 1531 aa18.2■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 HmmrQ00547 794 aaKnown RBP18.2■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Ak7Q9D2H2 614 aa18.2■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Gcom1E9PZ54 550 aa18.19■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 MyzapQ3UIJ9 466 aa18.19■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 EappQ5BU09 281 aa18.19■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Gnai2P08752 355 aaKnown RBP18.19■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Cavin4A2AMM0 362 aa18.18■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Gripap1Q8VD04 806 aa18.18■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 AampJ3QN89 436 aa18.18■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Btbd11Q6GQW0 1109 aa18.18■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Ccdc171E9Q1U1 1324 aa18.18■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Erich4Q3UNU4 136 aa18.17■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Ddrgk1Q80WW9 315 aa18.17■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Cfap69Q8BH53 942 aa18.17■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Cdca7Q9D0M2 382 aa18.17■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Ift140E9PY46 1464 aa18.17■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Pdcl3Q8BVF2 240 aa18.16■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Ripk4Q9ERK0 786 aa18.16■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Apaf1O88879 1249 aa18.16■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Ints3Q7TPD0 1041 aaKnown RBP18.16■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Zkscan2G3X952 960 aa18.16■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Elp1Q7TT37 1333 aaKnown RBP18.16■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Erc1Q99MI1 1120 aa18.15■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Gm7298A0A0N4SVU1 1476 aa18.15■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Exoc6bA6H5Z3 810 aa18.15■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Duox2A2AQ99 1517 aa18.15■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Nlrp3Q8R4B8 1033 aa18.15■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 NaspQ99MD9 773 aaKnown RBP18.15■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Ccdc34Q3UI66 367 aa18.15■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Ggnbp2Q5SV77 696 aa18.15■□□□□ 0.5
Ccdc50-203ENSMUST00000100026 Eif3aP23116 1344 aaKnown RBP18.14■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Nphp1Q9QY53 687 aa18.14■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Map3k13Q1HKZ5 959 aa18.14■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 CadpsQ80TJ1 1355 aa18.14■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Top2aQ01320 1528 aaKnown RBP18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Rufy1Q8BIJ7 712 aa18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Atl3Q91YH5 541 aa18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Hmgn5Q9JL35 406 aa18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Ankib1Q6ZPS6 1085 aa18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 GlmnQ8BZM1 596 aa18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Golim4Q8BXA1 655 aa18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Ccdc178Q8CDV0 866 aa18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Ubxn4Q8VCH8 506 aa18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Klc3Q91W40 508 aa18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Kdm4aQ8BW72 1064 aa18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Znhit6Q3UFB2 460 aaKnown RBP18.13■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Cc2d2aQ8CFW7 1633 aa18.12■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 GnpatP98192 678 aa18.12■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Eif3bQ8JZQ9 803 aaKnown RBP18.12■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Rabep1O35551 862 aa18.12■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Mrc2Q64449 1479 aa18.12■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Ush1cQ9ES64 910 aa18.11■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Ppp2r1aQ76MZ3 589 aa18.11■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Cwc27Q3TKY6 469 aa18.11■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Dixdc1Q80Y83 711 aa18.11■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 KarsQ99MN1 595 aaKnown RBP18.11■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Galntl5Q9D4M9 431 aa18.1■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Hmgb2P30681 210 aaKnown RBP18.1■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Zrsr2Q62377 462 aaKnown RBP18.1■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Washc2Q6PGL7 1334 aa18.1■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Mcm2P97310 904 aa18.09■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Stk11ipQ3TAA7 1072 aa18.09■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Gsdma2Q32M21 443 aa18.09■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Themis2Q91YX0 663 aa18.09■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Gimap5Q8BWF2 308 aa18.08■□□□□ 0.49
Ccdc50-203ENSMUST00000100026 Fkbp5Q64378 456 aa18.08■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Dnajc2P54103 621 aaKnown RBP18.08■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Znf697Q569E7 569 aa18.08■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Vps37dQ810I0 261 aa18.08■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 SkilQ60665 675 aa18.07■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Nup133Q8R0G9 1155 aa18.07■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Babam1Q3UI43 333 aa18.07■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 PalmQ9Z0P4 383 aa18.07■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Nolc1E9Q5C9 702 aaKnown RBP18.07■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Q3UJC8 639 aa18.07■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Q7TT23 1179 aa18.06■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Stk38Q91VJ4 465 aa18.06■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Kcnh5Q920E3 988 aa18.06■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Rab3gap2Q8BMG7 1366 aa18.06■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 SfswapQ3USH5 945 aaKnown RBP18.06■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 VeztQ3ZK22 780 aa18.06■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Q9D9S1 216 aa18.05■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Plekhh1Q80TI1 1356 aa18.05■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Dhx8A2A4P0 1244 aaKnown RBP18.05■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Mre11Q61216 706 aa18.04■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Dusp9Q7TNL7 452 aa18.04■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Srgap3Q812A2 1099 aa18.04■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Gm10563F6WIE4 79 aa18.04■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Lrrc45Q8CIM1 670 aa18.04■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 4933402E13RikQ9D4D2 429 aa18.04■□□□□ 0.48
Ccdc50-203ENSMUST00000100026 Cep131Q62036 1060 aa18.04■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms