RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 SelenooQ9DBC0 667 aa19.48■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Fam184bQ0KK56 942 aa19.48■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Jakmip3Q5DTN8 844 aa19.48■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Secisbp2lQ6A098 1086 aaKnown RBP19.48■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Cfap99A0A140LIX9 648 aa19.48■□□□□ 0.71
Col17a1-202ENSMUST00000086923 CenpqQ9CPQ5 267 aa19.48■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Smc5Q8CG46 1101 aaKnown RBP19.47■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Eif3aP23116 1344 aaKnown RBP19.47■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Trerf1Q8BXJ2 1205 aa19.47■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Gnl2Q99LH1 728 aaKnown RBP19.46■□□□□ 0.71
Col17a1-202ENSMUST00000086923 SrrtQ99MR6 875 aaKnown RBP19.46■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Cep135Q6P5D4 1140 aa19.46■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Rbm27Q5SFM8 1060 aaKnown RBP19.45■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Eif5P59325 429 aaKnown RBP19.45■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Nbr1P97432 988 aa19.45■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Ankrd36D3Z4K0 1415 aa19.45■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Terf2O35144 541 aa19.45■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Egfem1Q8C088 590 aa19.45■□□□□ 0.7
Col17a1-202ENSMUST00000086923 ScaperF8VQ70 1398 aaKnown RBP19.45■□□□□ 0.7
Col17a1-202ENSMUST00000086923 DonsonQ9QXP4 560 aa19.44■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Fam107bQ3TGF2 131 aa19.44■□□□□ 0.7
Col17a1-202ENSMUST00000086923 LarsQ8BMJ2 1178 aa19.44■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Tshz2Q68FE9 1030 aa19.44■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Zeb2Q9R0G7 1215 aa19.44■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Sh3bp1P55194 680 aa19.44■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Gm18336A0A140LIU8 765 aa19.43■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Ranbp1P34022 203 aaKnown RBP19.43■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Nol10Q5RJG1 687 aaKnown RBP19.43■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Bag4Q8CI61 457 aa19.43■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Krt85Q9Z2T6 507 aa19.43■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Gzf1Q4VBD9 706 aa19.43■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Ric3Q8BPM6 367 aa19.43■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Nom1Q3UFM5 854 aaKnown RBP19.42■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Hspa4Q61316 841 aa19.42■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Mcm3P25206 812 aaKnown RBP19.42■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Erc2Q6PH08 957 aa19.42■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Kdm5dQ62240 1548 aa19.42■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Zkscan2G3X952 960 aa19.42■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Mmel1Q9JLI3 765 aa19.42■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Cpa2Q504N0 417 aa19.41■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Psma5Q9Z2U1 241 aaKnown RBP19.41■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Paip2Q9D6V8 124 aa19.41■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Bbof1Q3V079 533 aa19.41■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Stk26Q99JT2 416 aa19.41■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Il4rP16382 810 aa19.41■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Ccdc73Q8CDM4 1066 aa19.41■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Hdgfl1Q2VPR5 283 aa19.4■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Als2cr12Q8BVM7 383 aa19.4■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Q8C5K5 320 aa19.4■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Acbd3Q8BMP6 525 aa19.4■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Kri1Q8VDQ9 704 aaKnown RBP19.4■□□□□ 0.7
Col17a1-202ENSMUST00000086923 Noc3lQ8VI84 807 aaKnown RBP19.39■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Rasa1E9PYG6 1038 aa19.39■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Mcm6P97311 821 aa19.39■□□□□ 0.69
Col17a1-202ENSMUST00000086923 SarnpQ9D1J3 210 aaKnown RBP19.39■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Wdr33Q8K4P0 1330 aaKnown RBP19.39■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Stk38Q91VJ4 465 aa19.39■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Q9D9S1 216 aa19.39■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Erlin2Q8BFZ9 340 aa19.38■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Vps18Q8R307 973 aa19.38■□□□□ 0.69
Col17a1-202ENSMUST00000086923 IncenpQ9WU62 880 aa19.38■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Snw1Q9CSN1 536 aaKnown RBP19.38■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Smarcc1P97496 1104 aa19.37■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Vps37cQ8R105 352 aa19.37■□□□□ 0.69
Col17a1-202ENSMUST00000086923 U2af2P26369 475 aaKnown RBP19.37■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Ca8P28651 291 aa19.37■□□□□ 0.69
Col17a1-202ENSMUST00000086923 CebpzP53569 1052 aaKnown RBP19.37■□□□□ 0.69
Col17a1-202ENSMUST00000086923 FanciQ8K368 1330 aa19.37■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Zkscan7E9PVW1 718 aa19.37■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Nup155Q99P88 1391 aaKnown RBP19.37■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Ccdc186Q8C9S4 917 aa19.36■□□□□ 0.69
Col17a1-202ENSMUST00000086923 PhaxQ9JJT9 385 aaKnown RBP19.36■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Rbm25B2RY56 838 aaKnown RBP19.36■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Jakmip1Q8BVL9 626 aa19.35■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Synpo2Q91YE8 1087 aaKnown RBP19.35■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Ppip5k2Q6ZQB6 1129 aa19.35■□□□□ 0.69
Col17a1-202ENSMUST00000086923 MvpQ9EQK5 861 aa19.35■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Gcc1Q9D4H2 778 aa19.35■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Ccdc93Q7TQK5 629 aa19.35■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Tspyl2Q7TQI8 677 aa19.34■□□□□ 0.69
Col17a1-202ENSMUST00000086923 TxlnbQ8VBT1 685 aa19.34■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Ssr1Q9CY50 286 aaKnown RBP19.34■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Ncbp3Q8BZR9 615 aaKnown RBP19.34■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Stk3Q9JI10 497 aa19.34■□□□□ 0.69
Col17a1-202ENSMUST00000086923 Stk31Q99MW1 1018 aa19.33■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Pafah1b1P63005 410 aaKnown RBP19.33■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Abcd1P48410 736 aa19.32■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Ercc3P49135 783 aa19.32■□□□□ 0.68
Col17a1-202ENSMUST00000086923 UacaQ8CGB3 1411 aa19.32■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Efcab5A0JP43 1406 aa19.32■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Smc2Q8CG48 1191 aaKnown RBP19.32■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Ktn1Q61595 1327 aaKnown RBP19.31■□□□□ 0.68
Col17a1-202ENSMUST00000086923 MpndQ3TV65 487 aa19.31■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Armc9Q9D2I5 817 aa19.31■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Slc13a4Q8BZ82 625 aa19.31■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Map3k7clP58500 142 aa19.31■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Gtf2f1Q3THK3 508 aaKnown RBP19.31■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Chd1lQ9CXF7 900 aa19.31■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Rsph10bE9PYQ0 876 aa19.3■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Calcoco1Q8CGU1 691 aa19.3■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms