RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 TnmdQ9EP64 317 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Dhx9O70133 1380 aaKnown RBP11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 NefhP19246 1090 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Plekhg5Q66T02 1073 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Ppm1fQ8CGA0 452 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Cabp2Q9JLK4 216 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 HmmrQ00547 794 aaKnown RBP11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Frmd3Q8BHD4 595 aa11.18□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Tmco3Q8BH01 678 aa11.17□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Znf771Q8BJ90 317 aa11.17□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Abl1P00520 1123 aa11.17□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Necab1Q8BG18 352 aa11.17□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Tfip11Q9ERA6 838 aaKnown RBP11.17□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 L3mbtl2P59178 703 aa11.17□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Sycp1Q62209 993 aa11.16□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Tspyl2Q7TQI8 677 aa11.16□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Bcl11bQ99PV8 884 aa11.16□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Rbm28Q8CGC6 750 aaKnown RBP11.16□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 SelenooQ9DBC0 667 aa11.16□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Cwc27Q3TKY6 469 aa11.16□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Stk38Q91VJ4 465 aa11.16□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Chrna2Q91X60 512 aa11.15□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Arhgap5P97393 1501 aa11.15□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Urb2E9Q7L1 1524 aaKnown RBP11.15□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 CastP51125 788 aa11.15□□□□□ -0.62
Prpf40a-201ENSMUST00000076313 Srgap3Q812A2 1099 aa11.15□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Znf704Q9ERQ3 566 aa11.15□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Mctp1E9PV86 951 aa11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Fkbp4P30416 458 aa11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Syce3B5KM66 88 aa11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Pdia4P08003 638 aaKnown RBP11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Smc2Q8CG48 1191 aaKnown RBP11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 CarsQ9ER72 831 aaKnown RBP11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Nol8Q3UHX0 1147 aaKnown RBP11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Kif3cO35066 796 aa11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 TatQ8QZR1 454 aa11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Samm50Q8BGH2 469 aa11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Odf2lQ9D478 642 aa11.14□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Gm10471E9Q1C7 252 aa11.13□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Prdm16A2A935 1275 aa11.13□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Agtpbp1Q641K1 1218 aa11.13□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Cpa2Q504N0 417 aa11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 HypkQ9CR41 129 aa11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Bag1Q60739 355 aa11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Maco1Q7TQE6 664 aaKnown RBP11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Chaf1aQ9QWF0 911 aa11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Eva1cP58659 440 aa11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Cep112Q5PR68 954 aa11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Efcab5A0JP43 1406 aa11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Cdc37l1Q9CZP7 335 aa11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Krt85Q9Z2T6 507 aa11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Tiam1Q60610 1591 aa11.12□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Med4Q9CQA5 270 aa11.11□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Cnnm1Q0GA42 951 aa11.11□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Ccdc102aQ3TMW1 549 aa11.11□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Prpf4bQ61136 1007 aaKnown RBP11.11□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Prm3Q62100 101 aa11.11□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Ppip5k2Q6ZQB6 1129 aa11.11□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Ggnbp2Q5SV77 696 aa11.11□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Sytl4Q9R0Q1 673 aa11.11□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 UvssaQ9D479 717 aa11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Arhgap31A6X8Z5 1425 aa11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Def6Q8C2K1 630 aa11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Nup88Q8CEC0 753 aaKnown RBP11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 MvpQ9EQK5 861 aa11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Pmfbp1Q9WVQ0 1022 aa11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Duox2A2AQ99 1517 aa11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Ift57Q8BXG3 429 aa11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Dctn1O08788 1281 aa11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 TefQ9JLC6 301 aa11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Mrvi1Q9WUX5 899 aaKnown RBP11.1□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 PalmQ9Z0P4 383 aa11.09□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 ItpripQ3TNL8 555 aa11.09□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Cdk19Q8BWD8 501 aa11.09□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Kif20aP97329 887 aa11.09□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Map3k13Q1HKZ5 959 aa11.09□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Zpr1Q62384 459 aa11.09□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 PrxO55103 1391 aa11.09□□□□□ -0.63
Prpf40a-201ENSMUST00000076313 Washc4Q3UMB9 1173 aa11.08□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Kiaa0753Q6A000 959 aa11.08□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Secisbp2lQ6A098 1086 aaKnown RBP11.08□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Trim30cD3YVI9 513 aa11.08□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Lamb3Q61087 1168 aa11.08□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Fsd1Q7TPM6 496 aa11.08□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 OptnQ8K3K8 584 aa11.08□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Zranb3Q6NZP1 1069 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Ptpdc1Q6NZK8 747 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Gnl3lQ6PGG6 577 aaKnown RBP11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Cep57l1Q8VDS7 400 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Tubb6Q922F4 447 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Exoc6bA6H5Z3 810 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Cfap58B2RW38 873 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Mcm4P49717 862 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Commd10Q8JZY2 202 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Cbx1P83917 185 aaKnown RBP11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Smc5Q8CG46 1101 aaKnown RBP11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Nat10Q8K224 1024 aaKnown RBP11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Top1mtQ8R4U6 593 aa11.07□□□□□ -0.64
Prpf40a-201ENSMUST00000076313 Atxn3Q9CVD2 355 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms