RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ipo4Q8VI75 1082 aa12.09□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 ShprhQ7TPQ3 1674 aa12.09□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Usp19Q3UJD6 1360 aa12.08□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Kiaa1107Q80TK0 1369 aa12.08□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Ric3Q8BPM6 367 aa12.08□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Asxl2Q8BZ32 1370 aa12.08□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Lmod3E9QA62 571 aa12.08□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Nos1Q9Z0J4 1429 aa12.08□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 AU019823E9PUQ3 292 aa12.07□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Eif4g2Q62448 906 aaKnown RBP12.07□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Slc12a5Q91V14 1138 aa12.07□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Q4VA45 678 aa12.07□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Cabp2Q9JLK4 216 aa12.07□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Hecw1Q8K4P8 1604 aa12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Lrrc7Q80TE7 1490 aa12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Rtf1A2AQ19 715 aaKnown RBP12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Rtn4Q99P72 1162 aaKnown RBP12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 P2rx7Q9Z1M0 595 aa12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Setd1aE9PYH6 1716 aa12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Catsper2A2ARP9 588 aa12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Q3TQI7 289 aaKnown RBP12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 IbtkQ6ZPR6 1352 aaKnown RBP12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Stk31Q99MW1 1018 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 InsrP15208 1372 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 NinlQ6ZQ12 1394 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 FanciQ8K368 1330 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 PalldQ9ET54 1408 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Kidins220E9Q9B7 1793 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Pola1P33609 1465 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Mcm10Q0VBD2 885 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Abca6Q8K441 1624 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 CastP51125 788 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 MpripP97434 1024 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Dnajc5gQ8C632 165 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Zfyve16Q80U44 1528 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Cdc37l1Q9CZP7 335 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Q9D2X8 372 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Neurl4Q5NCX5 1563 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Gnai1B2RSH2 354 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Casq1O09165 405 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Plekhm2Q80TQ5 1018 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Gnai3Q9DC51 354 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Prrc2bQ7TPM1 1486 aaKnown RBP12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Q3UPC7 1272 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 HnrnpmQ9D0E1 729 aaKnown RBP12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Cyb5rlB1AS42 316 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Mcm4P49717 862 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Rsph4aQ8BYM7 716 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Tbc1d32Q3URV1 1296 aa12.02□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Cabp4Q8VHC5 271 aa12.02□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Cfap65Q3V0B4 1847 aa12.02□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 AampJ3QN89 436 aa12.02□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 AnkarA2RT91 1465 aa12.02□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Kdm5aQ3UXZ9 1690 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Ccdc171E9Q1U1 1324 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Robo2Q7TPD3 1470 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Pcmtd1P59913 357 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Scaf11E9PZM7 1456 aaKnown RBP12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Paxip1Q6NZQ4 1056 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Nol12Q8BG17 217 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Phlpp2Q8BXA7 1320 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Phactr2B1AVP0 632 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Terf2O35144 541 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Smarca5Q91ZW3 1051 aaKnown RBP12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Klhdc4Q921I2 584 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Yeats2Q3TUF7 1407 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Pdcl3Q8BVF2 240 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 CarsQ9ER72 831 aaKnown RBP12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Pdcd11Q6NS46 1862 aaKnown RBP11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Ggnbp2Q5SV77 696 aa11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Pknox2Q8BG99 474 aa11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Ciz1Q8VEH2 845 aa11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Cetn4Q8K4K1 168 aa11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Xrn1P97789 1719 aaKnown RBP11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Skint5A7XUY5 1461 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Cgnl1Q6AW69 1298 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Casc1Q6TDU8 730 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Pip4k2bQ80XI4 416 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Talpid3E9PV87 1520 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Gm21190A0A0G2JGJ6 266 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Rrp12Q6P5B0 1295 aaKnown RBP11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Rnf214Q8BFU3 668 aaKnown RBP11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 4933402E13RikQ9D4D2 429 aa11.97□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 MvpQ9EQK5 861 aa11.97□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Kiaa1210E9Q0C6 1637 aa11.97□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Aldh1l1Q8R0Y6 902 aa11.97□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Tbc1d9Q3UYK3 1264 aa11.97□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 MccE9PWI3 1003 aa11.96□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Uggt2E9Q4X2 1504 aa11.96□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 PogkQ80TC5 607 aa11.96□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Gprasp1Q5U4C1 1347 aa11.96□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Tmc1Q8R4P5 757 aa11.95□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Rims1Q99NE5 1463 aa11.95□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Hmox1P14901 289 aa11.95□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Slc4a10Q5DTL9 1118 aa11.95□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Efcab6Q6P1E8 1516 aa11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Ttc41Q692V3 1318 aa11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Brpf1B2RRD7 1212 aa11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Phf14Q9D4H9 881 aa11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Iqgap3F8VQ29 1632 aa11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms