RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Ift172Q6VH22 1749 aa24.23■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Prdm2A2A7B5 1709 aaKnown RBP24.22■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Atxn3Q9CVD2 355 aa24.22■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 MyclP10166 368 aa24.21■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Cnga1P29974 684 aa24.21■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Stag3O70576 1240 aa24.2■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Fgd1P52734 960 aa24.2■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 KarsQ99MN1 595 aaKnown RBP24.2■■□□□ 1.47
Ccdc50-201ENSMUST00000039443 Ksr2Q3UVC0 959 aa24.19■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Ciz1Q8VEH2 845 aa24.19■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 P2rx7Q9Z1M0 595 aa24.19■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 CenpjQ569L8 1344 aa24.19■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Phlpp2Q8BXA7 1320 aa24.18■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Gm6268A2A3U9 297 aa24.18■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 IqubQ8CDK3 788 aa24.18■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Lrrc7Q80TE7 1490 aa24.17■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Ahdc1Q6PAL7 1594 aaKnown RBP24.16■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Slc52a2Q9D8F3 450 aa24.16■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Polr3glQ8R0C0 218 aa24.16■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 4930407I10RikD3Z5T8 1512 aa24.15■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 PtprmP28828 1452 aa24.15■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Map7O88735 730 aa24.15■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Prdm10Q3UTQ7 1184 aa24.15■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Tnpo1Q8BFY9 898 aaKnown RBP24.15■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Bcl9Q9D219 1425 aa24.14■■□□□ 1.46
Ccdc50-201ENSMUST00000039443 Tsen2Q6P7W5 460 aa24.13■■□□□ 1.45
Ccdc50-201ENSMUST00000039443 U2af1Q9D883 239 aaKnown RBP24.13■■□□□ 1.45
Ccdc50-201ENSMUST00000039443 Nrxn1Q9CS84 1514 aa24.13■■□□□ 1.45
Ccdc50-201ENSMUST00000039443 Ercc6l2Q9JIM3 1537 aa24.11■■□□□ 1.45
Ccdc50-201ENSMUST00000039443 Armcx1Q9CX83 456 aa24.11■■□□□ 1.45
Ccdc50-201ENSMUST00000039443 Brwd3A2AHJ4 1799 aa24.11■■□□□ 1.45
Ccdc50-201ENSMUST00000039443 AU015836B2RUM3 263 aa24.1■■□□□ 1.45
Ccdc50-201ENSMUST00000039443 Apaf1O88879 1249 aa24.09■■□□□ 1.45
Ccdc50-201ENSMUST00000039443 Znf541Q0GGX2 1363 aa24.09■■□□□ 1.45
Ccdc50-201ENSMUST00000039443 Pdcl3Q8BVF2 240 aa24.08■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Antxr1Q9CZ52 562 aa24.08■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 AU022751B1B0V2 589 aa24.05■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Dusp27Q148W8 1138 aa24.05■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Kif13aQ9EQW7 1749 aa24.05■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Itsn1Q9Z0R4 1714 aa24.05■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 PaskQ8CEE6 1383 aa24.05■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Chd2E9PZM4 1827 aaKnown RBP24.04■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Mroh1E0CZ22 1640 aa24.04■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Ccdc171E9Q1U1 1324 aa24.04■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Uhrf1bp1B2KF50 1429 aa24.04■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Trim26Q99PN3 545 aa24.03■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Phf14Q9D4H9 881 aa24.03■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 ArxO35085 564 aa24.03■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Topaz1E5FYH1 1653 aa24.02■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 CastP51125 788 aa24.02■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Kif20aP97329 887 aa24.02■■□□□ 1.44
Ccdc50-201ENSMUST00000039443 Ttc21aQ8C0S4 1314 aa24.01■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Cavin4A2AMM0 362 aa24.01■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Exosc9Q9JHI7 438 aaKnown RBP24■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Naip7Q9JIB3 1402 aa24■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Mfap1aC0HKD8 439 aaKnown RBP23.99■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Mfap1bC0HKD9 439 aaKnown RBP23.99■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 KnstrnQ9D9Z1 312 aaKnown RBP23.99■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Ankrd50F7BE84 1390 aa23.98■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Usp32F8VPZ3 1604 aa23.98■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Cluap1Q8R3P7 413 aa23.98■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 FanciQ8K368 1330 aa23.97■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 SkilQ60665 675 aa23.97■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Terf2O35144 541 aa23.96■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Dnttip2Q8R2M2 758 aaKnown RBP23.96■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Prrc2bQ7TPM1 1486 aaKnown RBP23.96■■□□□ 1.43
Ccdc50-201ENSMUST00000039443 Gtf2a1Q99PM3 378 aa23.95■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 GphnQ8BUV3 769 aaKnown RBP23.95■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Kif18aQ91WD7 886 aa23.95■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Pnmal2G3X9N3 661 aa23.93■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Chmp4bQ9D8B3 224 aaKnown RBP23.93■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Rbm25B2RY56 838 aaKnown RBP23.93■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Isy1Q69ZQ2 285 aaKnown RBP23.93■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Catsper2A2ARP9 588 aa23.92■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 AU019823E9PUQ3 292 aa23.92■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Wwc1Q5SXA9 1104 aa23.92■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Ncapd2Q8K2Z4 1392 aa23.92■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Mcm4P49717 862 aa23.92■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Maco1Q7TQE6 664 aaKnown RBP23.92■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Kif2cQ922S8 721 aa23.92■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Ppp1r3fQ9JIG4 799 aa23.92■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Fchsd2Q3USJ8 740 aa23.91■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Ccdc60Q8C4J0 545 aa23.91■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Pik3r4Q8VD65 1358 aa23.91■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Gemin5Q8BX17 1502 aaKnown RBP23.9■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 G3bp1P97855 465 aaKnown RBP23.9■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Atp7bQ64446 1462 aa23.89■■□□□ 1.42
Ccdc50-201ENSMUST00000039443 Brd1E9PZ26 1189 aaKnown RBP23.89■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Cetn4Q8K4K1 168 aa23.88■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Gm10093D3YYI8 482 aa23.88■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Hdac1O09106 482 aaKnown RBP23.88■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Zc3h13E9Q784 1729 aaKnown RBP23.87■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Ssh1Q76I79 1042 aa23.87■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Swt1Q9DBQ9 907 aa23.87■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Kcnn1Q9EQR3 537 aa23.86■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 PplQ9R269 1755 aa23.85■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Rsph3aQ3UFY4 516 aa23.85■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Txndc2Q6P902 515 aa23.85■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Gsto1O09131 240 aa23.84■■□□□ 1.41
Ccdc50-201ENSMUST00000039443 Cog6Q8R3I3 657 aa23.84■■□□□ 1.41
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms